Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16008
- Subject:
- XM_011537684.3
- Aligned Length:
- 2364
- Identities:
- 1278
- Gaps:
- 1086
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCACTTGATAAATTTCAAACAGTACAGAAAGGTACAAAATGAAAACTCTCCTCTTCTCAAAGACCACTCAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCTTTTGGCCAGTTTATTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AATTATTACCCAGCCTAGAGTTTATTTCACTGGATCAGATGTTTCGTGAACCACCCAAGGGTTGTGCTCGAGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTCTGAGTGCAGGCACAGGAATTGGTGTTTCATCAGCTCTTGTTAGCAACCAGAACTCCAACAATGACGATAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TAATGCCCAGAATAACAATGCCAACATCCACGACAACAATCACCATCATCCAGATGACTCAGACGAGGAGAATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTTTCGGCAAGATCTGCAGCCAGGAGAGCAGCAGTTTGCAGCTGACGCATTAAATGAGATGGAAGACATCGTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAAGAAGATGGAGAGGTGGTGGCCGAGAGTGGAAATAATACTCCAGCTCACAGCCAGGCAATTATTCCTGTGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTTGATGAGGAACAAGCAGGACCCAGTGGTCTTCAGCGTGTAGTAAAACCAACCTCAATTACTGTTCATGATT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGAGAGTGATGATGAAGAAGATAGTCTAGAACTCCAAGAAGTCTGGATTCCTAAGAACGGTACTCGGCGTTAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTGAACGTGAAGAAAAAACTGGAGAGTCAGTGCAGTCCAGAGAATTGTCAGTAAGTGGAAAAGGCAAGACTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACTTCGAAAGAGGTACAACTCCCATCAGATGGGCCAGTCGAAGCAGTTTCCCCTCGAGGAAAGCAGCTGTGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGGCTGTCAGGTCACCAGTGAGCAGATCAAAGCCGATATGAAAGCAGCTAGGGATATTCCTGAAAAGAAAAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AACAAGGATGTTTATCCCAGCTGCAGCAGCACCACCGCCAGCACAGTGGGAAACTCCAGCTCACACAACACTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTCTCAAAGCCCCGACTTTGTAAGGACGGTGAACAGCGGCGGCTCTTCCGAGCCTAGCCCTACAGAAGTGGATG 1036
Query 1 --------------------------------------------------ATGGAGGAGGGAGATGCAGAGAGT 24
||||||||||||||||||||||||
Sbjct 1037 TGTCCAGGCAGTGTGCCTGCTCCCCCGGTGGGTCAGAGGACTCTGAGGCCATGGAGGAGGGAGATGCAGAGAGT 1110
Query 25 TCTGTCTGCCCCAGATGCTGCTGTCACAGGCCCCAGGAATCCCAAAGGAGAACTAGCAGGTGTTCTGATGAGGA 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCTGTCTGCCCCAGATGCTGCTGTCACAGGCCCCAGGAATCCCAAAGGAGAACTAGCAGGTGTTCTGATGAGGA 1184
Query 99 ACGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCCCGGATGGTACGAGATCCGCCTTTTCCTTTAGGACTC 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 ACGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCCCGGATGGTACGAGATCCGCCTTTTCCTTTAGGACTC 1258
Query 173 TGCCACAAGGGGGGTCTTCAGGCCCAGCACATGATGAGAGGACTAATGGGAGTGGCTCTGGGGCTACAGGTGAG 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGCCACAAGGGGGGTCTTCAGGCCCAGCACATGATGAGAGGACTAATGGGAGTGGCTCTGGGGCTACAGGTGAG 1332
Query 247 GACAGGAGGGGGAGCTCCCAGCCTGAGAGTTGTGACGTGCAGTCTAATGAAGACTACCCTCGGAGGCCCCTAAC 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GACAGGAGGGGGAGCTCCCAGCCTGAGAGTTGTGACGTGCAGTCTAATGAAGACTACCCTCGGAGGCCCCTAAC 1406
Query 321 CAGGGCCAGGAGCAGACTGTCCCATGTACTGCTGGTATCTGAGTCAGAAGTAGCCAAAACAAAGCCACGTCACG 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 CAGGGCCAGGAGCAGACTGTCCCATGTACTGCTGGTATCTGAGTCAGAAGTAGCCAAAACAAAGCCACGTCACG 1480
Query 395 CCATGAAACGGAAGCGGACAGCAGATAAATCCACTAGTACAAGTGATCCTGTGATCGAGGATGACCATGTGCAG 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCATGAAACGGAAGCGGACAGCAGATAAATCCACTAGTACAAGTGATCCTGTGATCGAGGATGACCATGTGCAG 1554
Query 469 GTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCACTATGACCAATTGTGGAATCACAGATCTAGTGCTAAA 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCACTATGACCAATTGTGGAATCACAGATCTAGTGCTAAA 1628
Query 543 AGACTGTCCAAAGATGATGTTCATCCATGCTACCAGGTGCAGGGTACTAAAACATTTAAAGGTAGAAAATGCAC 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AGACTGTCCAAAGATGATGTTCATCCATGCTACCAGGTGCAGGGTACTAAAACATTTAAAGGTAGAAAATGCAC 1702
Query 617 CAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACTGAACATGGATCAGGTACTAGACCAGATACTAAGA 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACTGAACATGGATCAGGTACTAGACCAGATACTAAGA 1776
Query 691 ATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAATGCAGCAGGTGGACACTCTAACTTTGGAGCAGAA 764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 ATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAATGCAGCAGGTGGACACTCTAACTTTGGAGCAGAA 1850
Query 765 GCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCATGAATTCAGTAACCCTCCCAATGTCCGGAATA 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCATGAATTCAGTAACCCTCCCAATGTCCGGAATA 1924
Query 839 AGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAACATCAATCAAGAGCTCATTAAATATGAATTCTTCCCT 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAACATCAATCAAGAGCTCATTAAATATGAATTCTTCCCT 1998
Query 913 GAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAGAAATCTATACTTTAGA 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAGAAATCTATACTTTAGA 2072
Query 987 AGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGC 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCATTACGAGCTGCAGAGC 2146
Query 1061 CCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGCACTATCTATGCTCCTAGAAGGAAAGGACAG 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGCACTATCTATGCTCCTAGAAGGAAAGGACAG 2220
Query 1135 CTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATGAAGAAGGGTGTATT 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 CTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATGAAGAAGGGTGTATT 2294
Query 1209 TCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAAGATGACTACATT 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 TCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAAGATGACTACATT 2364
