Nucleotide Global Alignment

Description

Query:
ccsbBroad304_16026
Subject:
NM_001009981.2
Aligned Length:
953
Identities:
405
Gaps:
493

Alignment

Query   1  ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTAAACT  74
           |||||||||||||||||...|||||||||.||||||||||||||.||||||.|||||||||..|..|||||.||
Sbjct   1  ATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAGTGGTGGCGATCGGCGCCGCTAAGCT  74

Query  75  GGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCAACAA  148
           .||||||||..|.||.|||||.||||||||||||||||||||.||||||||.|||||||||||.||.|||||.|
Sbjct  75  CGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACTGTGTCCTACATTGCCGTCGCAACGA  148

Query 149  TATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCATCTT  222
           |||||||.|||||||||||.|||||.|||||.||||||||||||||.||..|||||||.||.|.||||||||||
Sbjct 149  TATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGCACTGGTGCACCTGAGACTGCATCTT  222

Query 223  TTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCACACC  296
           ||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|||||||||||.||||||.|||||.|
Sbjct 223  TTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCTTTCTTCAGCTCTTATCAGTCACATC  296

Query 297  CATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTGATTT  370
           |||||||||.|||||||||||||||.||||||||||||||||||||||.||.||||||||||||||.|||||||
Sbjct 297  CATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCACCCCCTGTGTCTTCTGCCGTGATTT  370

Query 371  TAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGTAAGTAAA  444
           ||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||       .
Sbjct 371  TAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGCATTTGGAAGTTTTTTGG-------G  437

Query 445  CATAGTT-TAACT----TGTCTATTACAACTTTTGCTG------------------------------------  477
           |||.||| |.|||    ||          ||..|||||                                    
Sbjct 438  CATTGTTGTGACTCCGGTG----------CTCCTGCTGCTTTTCATCGTCCGACGCTACATCAAGGACTGGCTG  501

Query 478  --------------------------------------------------------------------------  477
                                                                                     
Sbjct 502  GAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCATGATCATCTACACCACCTTCTGTGA  575

Query 478  --------------------------------------------------------------------------  477
                                                                                     
Sbjct 576  CACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTCATACTGTTCATAATAGTCTCCGTTC  649

Query 478  --------------------------------------------------------------------------  477
                                                                                     
Sbjct 650  AGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATAACTCGGGGTTCACACCAGCAGACACAGTG  723

Query 478  --------------------------------------------------------------------------  477
                                                                                     
Sbjct 724  GCTATCATCTTCTGCTCCACACACAAGTCCCTCACCTTGGGAATCCCAATGCTGAAGATAGTGTTTGCAGGCCA  797

Query 478  --------------------------------------------------------------------------  477
                                                                                     
Sbjct 798  TGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTCAGATTCTCCTGGGAAGTGTGTTAG  871

Query 478  -----------------------------------------------------------------  477
                                                                            
Sbjct 872  TGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAGTG  936