Nucleotide Global Alignment

Description

Query:
ccsbBroad304_16026
Subject:
NM_029736.2
Aligned Length:
1027
Identities:
414
Gaps:
557

Alignment

Query    1  ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTAAACT  74
            |||||||||||||||||...|||||||||.||||||||||||||.||||||.|||||||||..|..|||||.||
Sbjct    1  ATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAGTGGTGGCGATCGGCGCCGCTAAGCT  74

Query   75  GGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCAACAA  148
            .||||||||..|.||.|||||.||||||||||||||||||||.||||||||.|||||||||||.||.|||||.|
Sbjct   75  CGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACTGTGTCCTACATTGCCGTCGCAACGA  148

Query  149  TATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCATCTT  222
            |||||||.|||||||||||.|||||.|||||.||||||||||||||.||..|||||||.||.|.||||||||||
Sbjct  149  TATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGCACTGGTGCACCTGAGACTGCATCTT  222

Query  223  TTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCACACC  296
            ||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|||||||||||.||||||.|||||.|
Sbjct  223  TTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCTTTCTTCAGCTCTTATCAGTCACATC  296

Query  297  CATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTGATTT  370
            |||||||||.|||||||||||||||.||||||||||||||||||||||.||.||||||||||||||.|||||||
Sbjct  297  CATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCACCCCCTGTGTCTTCTGCCGTGATTT  370

Query  371  TAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGTAAGTAAA  444
            ||||||||||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||       .
Sbjct  371  TAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGCATTTGGAAGTTTTTTGG-------G  437

Query  445  CATAGTT-TAACT----------------------------------------TGTCTATTACAAC--TTTT--  473
            |||.||| |.|||                                        ||.||.|||||.|  ||||  
Sbjct  438  CATTGTTGTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCTTCGGTGCCTTTTACATCCATTTTCT  511

Query  474  ----GCTG------------------------------------------------------------------  477
                ||||                                                                  
Sbjct  512  CTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAGATCGTCCGACGCTACATCAAGGACTGGCTG  585

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  586  GAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCATGATCATCTACACCACCTTCTGTGA  659

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  660  CACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTCATACTGTTCATAATAGTCTCCGTTC  733

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  734  AGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATAACTCGGGGTTCACACCAGCAGACACAGTG  807

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  808  GCTATCATCTTCTGCTCCACACACAAGTCCCTCACCTTGGGAATCCCAATGCTGAAGATAGTGTTTGCAGGCCA  881

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  882  TGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTCAGATTCTCCTGGGAAGTGTGTTAG  955

Query  478  -----------------------------------------------------------------  477
                                                                             
Sbjct  956  TGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAGTG  1020