Nucleotide Global Alignment

Description

Query:
ccsbBroad304_16026
Subject:
NR_104094.1
Aligned Length:
3577
Identities:
340
Gaps:
3190

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA  222

Query    1  -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG  49
                                     |||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct  223  ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG  296

Query   50  TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT  123
            ||.|||||||||..|..|||||.||.||||||||..|.||.|||||.|||                        
Sbjct  297  TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGG------------------------  346

Query  124  GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC  197
                                                                       ||||||||||||.||
Sbjct  347  -----------------------------------------------------------GGAGCTGACCAGCGC  361

Query  198  TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT  271
            ..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct  362  ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT  435

Query  272  TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT  345
            ||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct  436  TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA  509

Query  346  CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC  419
            ||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  510  CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC  583

Query  420  CTTTGGAAGTTTTTTGGTAAGTAAACATAGTT-TAACT------------------------------------  456
            .||||||||||||||||       .|||.||| |.|||                                    
Sbjct  584  ATTTGGAAGTTTTTTGG-------GCATTGTTGTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCT  650

Query  457  ----TGTCTATTACAAC--TTTT------GCTG-----------------------------------------  477
                ||.||.|||||.|  ||||      ||||                                         
Sbjct  651  TCGGTGCCTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAGATCGT  724

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  725  CCGACGCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCA  798

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  799  TGATCATCTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTC  872

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  873  ATACTGTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATCCCAA  946

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  947  TGCTGAAGATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCT  1020

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1021  CAGATTCTCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCT  1094

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1095  GACAAGGCCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTACATATATGTACAGGCTGTACATA  1168

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1169  CAGGGGTTCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTATTTTTTTACAGAAAAAAATATGA  1242

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1243  TATACCTGTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAAACACACTCTGTTGGCTACTGCC  1316

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1317  AAGGGTAGTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAAGTTCTAGTAAGGGACAAAAGCT  1390

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1391  AACACGTTTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTATAACGTTCAAAATGAGGTCATGC  1464

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1465  CATCCAGAAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCACCGCACACTTTGATTCACCGAG  1538

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1539  TGGTTCTTTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGGGGATGCAGATCGCAGAGATGCC  1612

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1613  GAGAAGCGTCAGGTACCTCATTCCTTGACACCGTCTTCTTCCATCCATCCCCGCACACTCCAGAAACACTTCAG  1686

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1687  TCCCAGCACAGAGTGTGTGTGGGGGCTGGGGGGGGGGGGGGGAGTGCAGCTTAGATGTATTATCGGCTGCTTCA  1760

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1761  GAGAAAGTCCTGGTGAGTGTTGCCGTGAACTCGGACAGTGCTTTGGGACGTCTGCAATCGTACCTCAGTATGCT  1834

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1835  TCTCCCTTCCATCATTCCTTAGTTTCCCATTTTACTTACACACAACATCCCCGTGCAACACCCAAATGTCACAG  1908

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1909  TCAGCTGGAGAGTCACAGAAATCAACAGTGGATTATGTGTTCACATTCCACAGCTGGTTCCAAGCACATTCCTG  1982

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1983  TTACACTGTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTACATTAAGCGCACTTGAGACATCTGAGAAG  2056

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2057  ATTTATGAATCATTTGACAGATGTTCACAACATCTCTTAAGAAATCAAATCCTATCGCCTTAGGAGCCAGAGAA  2130

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2131  AATAAACATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACACTGCTAGTCAGGTGGAAGAAGGGCTGGTC  2204

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2205  CAGAAGAGCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGATGAGTCCGGGAACTGGGCACCAGCTTTGG  2278

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2279  AAAGGACTCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAAGCAGCATACTGAACAGTGGTGGGAGCGT  2352

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2353  CTTTCCTGAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCTCCCCAGCAGCTGCCTTTGCTGTTGGTAG  2426

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2427  TGGGGGCTGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGGGCTTTTCAGTGGTGTTGGGTTATGTTAT  2500

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2501  GGTTAGCATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTACCGTGGTTGGCGCTGGTGTTATGGTGTTA  2574

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2575  GCACCAGGTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAGCATAGCTATAACACTGGTGTCAGGCCTG  2648

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2649  GCAGAGATCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGAGGAGGCAGTGAGTCTGTTTGGTGAGTGT  2722

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2723  GCTGCCTCCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGCCTTGGGGCTTTAGAGGAAGTAGACACTG  2796

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2797  TCTGCCTGCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACACTGGTTTCCCCGCCGACCACATCTACCTC  2870

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2871  TCTGTGCGTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAACTTTTTCTCTTTTGCTTTAAAACTGTCTT  2944

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2945  TTGTTTTCAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTTAGTAACATGTCTGTGGCTACTTCTCCTT  3018

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3019  TTACACAAATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAAAATCAAAATTTGCTTTAATTTATGCTCA  3092

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3093  TTAGGATTGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACTGCCAATGTCTGTTTTATGTATTTGTTTG  3166

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3167  TCCAAATGTACCTATAAAAAGAATACATTAGACAGTTATGTTTACTCATTCCAACCTGGAATTGGTTTTAAACG  3240

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3241  GCTGGAACTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAAACGTTAAGGTTCTGTGGATTTTTTAAAT  3314

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3315  TCTTCCCTATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCAGTGTTTATGCTAAAAACCAAATTTTTTC  3388

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3389  AAAGAGATGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAAAATTTAAAAAAAAAATTCTATGATTAAA  3462

Query  478  -------------------------  477
                                     
Sbjct 3463  CAGAGAGTACTTGACGAATCTCTGG  3487

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