Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16026
- Subject:
- NR_104094.1
- Aligned Length:
- 3577
- Identities:
- 340
- Gaps:
- 3190
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA 222
Query 1 -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG 49
|||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct 223 ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG 296
Query 50 TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT 123
||.|||||||||..|..|||||.||.||||||||..|.||.|||||.|||
Sbjct 297 TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGG------------------------ 346
Query 124 GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC 197
||||||||||||.||
Sbjct 347 -----------------------------------------------------------GGAGCTGACCAGCGC 361
Query 198 TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT 271
..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct 362 ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT 435
Query 272 TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT 345
||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct 436 TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA 509
Query 346 CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC 419
||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 510 CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC 583
Query 420 CTTTGGAAGTTTTTTGGTAAGTAAACATAGTT-TAACT------------------------------------ 456
.|||||||||||||||| .|||.||| |.|||
Sbjct 584 ATTTGGAAGTTTTTTGG-------GCATTGTTGTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCT 650
Query 457 ----TGTCTATTACAAC--TTTT------GCTG----------------------------------------- 477
||.||.|||||.| |||| ||||
Sbjct 651 TCGGTGCCTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAGATCGT 724
Query 478 -------------------------------------------------------------------------- 477
Sbjct 725 CCGACGCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCA 798
Query 478 -------------------------------------------------------------------------- 477
Sbjct 799 TGATCATCTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTC 872
Query 478 -------------------------------------------------------------------------- 477
Sbjct 873 ATACTGTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATCCCAA 946
Query 478 -------------------------------------------------------------------------- 477
Sbjct 947 TGCTGAAGATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCT 1020
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1021 CAGATTCTCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCT 1094
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1095 GACAAGGCCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTACATATATGTACAGGCTGTACATA 1168
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1169 CAGGGGTTCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTATTTTTTTACAGAAAAAAATATGA 1242
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1243 TATACCTGTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAAACACACTCTGTTGGCTACTGCC 1316
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1317 AAGGGTAGTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAAGTTCTAGTAAGGGACAAAAGCT 1390
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1391 AACACGTTTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTATAACGTTCAAAATGAGGTCATGC 1464
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1465 CATCCAGAAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCACCGCACACTTTGATTCACCGAG 1538
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1539 TGGTTCTTTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGGGGATGCAGATCGCAGAGATGCC 1612
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1613 GAGAAGCGTCAGGTACCTCATTCCTTGACACCGTCTTCTTCCATCCATCCCCGCACACTCCAGAAACACTTCAG 1686
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1687 TCCCAGCACAGAGTGTGTGTGGGGGCTGGGGGGGGGGGGGGGAGTGCAGCTTAGATGTATTATCGGCTGCTTCA 1760
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1761 GAGAAAGTCCTGGTGAGTGTTGCCGTGAACTCGGACAGTGCTTTGGGACGTCTGCAATCGTACCTCAGTATGCT 1834
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1835 TCTCCCTTCCATCATTCCTTAGTTTCCCATTTTACTTACACACAACATCCCCGTGCAACACCCAAATGTCACAG 1908
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1909 TCAGCTGGAGAGTCACAGAAATCAACAGTGGATTATGTGTTCACATTCCACAGCTGGTTCCAAGCACATTCCTG 1982
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1983 TTACACTGTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTACATTAAGCGCACTTGAGACATCTGAGAAG 2056
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2057 ATTTATGAATCATTTGACAGATGTTCACAACATCTCTTAAGAAATCAAATCCTATCGCCTTAGGAGCCAGAGAA 2130
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2131 AATAAACATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACACTGCTAGTCAGGTGGAAGAAGGGCTGGTC 2204
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2205 CAGAAGAGCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGATGAGTCCGGGAACTGGGCACCAGCTTTGG 2278
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2279 AAAGGACTCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAAGCAGCATACTGAACAGTGGTGGGAGCGT 2352
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2353 CTTTCCTGAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCTCCCCAGCAGCTGCCTTTGCTGTTGGTAG 2426
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2427 TGGGGGCTGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGGGCTTTTCAGTGGTGTTGGGTTATGTTAT 2500
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2501 GGTTAGCATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTACCGTGGTTGGCGCTGGTGTTATGGTGTTA 2574
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2575 GCACCAGGTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAGCATAGCTATAACACTGGTGTCAGGCCTG 2648
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2649 GCAGAGATCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGAGGAGGCAGTGAGTCTGTTTGGTGAGTGT 2722
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2723 GCTGCCTCCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGCCTTGGGGCTTTAGAGGAAGTAGACACTG 2796
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2797 TCTGCCTGCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACACTGGTTTCCCCGCCGACCACATCTACCTC 2870
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2871 TCTGTGCGTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAACTTTTTCTCTTTTGCTTTAAAACTGTCTT 2944
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2945 TTGTTTTCAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTTAGTAACATGTCTGTGGCTACTTCTCCTT 3018
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3019 TTACACAAATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAAAATCAAAATTTGCTTTAATTTATGCTCA 3092
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3093 TTAGGATTGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACTGCCAATGTCTGTTTTATGTATTTGTTTG 3166
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3167 TCCAAATGTACCTATAAAAAGAATACATTAGACAGTTATGTTTACTCATTCCAACCTGGAATTGGTTTTAAACG 3240
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3241 GCTGGAACTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAAACGTTAAGGTTCTGTGGATTTTTTAAAT 3314
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3315 TCTTCCCTATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCAGTGTTTATGCTAAAAACCAAATTTTTTC 3388
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3389 AAAGAGATGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAAAATTTAAAAAAAAAATTCTATGATTAAA 3462
Query 478 ------------------------- 477
Sbjct 3463 CAGAGAGTACTTGACGAATCTCTGG 3487
