Nucleotide Global Alignment

Description

Query:
ccsbBroad304_16026
Subject:
XR_387785.1
Aligned Length:
3717
Identities:
414
Gaps:
3247

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA  222

Query    1  -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG  49
                                     |||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct  223  ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG  296

Query   50  TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT  123
            ||.|||||||||..|..|||||.||.||||||||..|.||.|||||.||||||||||||||||||||.||||||
Sbjct  297  TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACT  370

Query  124  GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC  197
            ||.|||||||||||.||.|||||.||||||||.|||||||||||.|||||.|||||.||||||||||||||.||
Sbjct  371  GTGTCCTACATTGCCGTCGCAACGATATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGC  444

Query  198  TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT  271
            ..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct  445  ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT  518

Query  272  TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT  345
            ||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct  519  TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA  592

Query  346  CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC  419
            ||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  593  CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC  666

Query  420  CTTTGGAAGTTTTTTGGTAAGTAAACATAGTT-TAACT------------------------------------  456
            .||||||||||||||||       .|||.||| |.|||                                    
Sbjct  667  ATTTGGAAGTTTTTTGG-------GCATTGTTGTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCT  733

Query  457  ----TGTCTATTACAAC--TTTT------GCTG-----------------------------------------  477
                ||.||.|||||.|  ||||      ||||                                         
Sbjct  734  TCGGTGCCTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAGAATCA  807

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  808  CTTTGTGATGCCCAATTCCACTTCCTACATCTCAGCGAAGAGGCGACCTGTTGATCTCTGTGTTTCAGATCGTC  881

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  882  CGACGCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCAT  955

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct  956  GATCATCTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTCA  1029

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1030  TACTGTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATAACTCG  1103

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1104  GGGTTCACACCAGCAGACACAGTGGCTATCATCTTCTGCTCCACACACAAGTCCCTCACCTTGGGAATCCCAAT  1177

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1178  GCTGAAGATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTC  1251

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1252  AGATTCTCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTG  1325

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1326  ACAAGGCCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTACATATATGTACAGGCTGTACATAC  1399

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1400  AGGGGTTCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTATTTTTTTACAGAAAAAAATATGAT  1473

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1474  ATACCTGTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAAACACACTCTGTTGGCTACTGCCA  1547

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1548  AGGGTAGTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAAGTTCTAGTAAGGGACAAAAGCTA  1621

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1622  ACACGTTTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTATAACGTTCAAAATGAGGTCATGCC  1695

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1696  ATCCAGAAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCACCGCACACTTTGATTCACCGAGT  1769

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1770  GGTTCTTTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGGGGATGCAGATCGCAGAGATGCCG  1843

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1844  AGAAGCGTCAGGTACCTCATTCCTTGACACCGTCTTCTTCCATCCATCCCCGCACACTCCAGAAACACTTCAGT  1917

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1918  CCCAGCACAGAGTGTGTGTGGGGGCTGGGGGGGGGGGGGGGAGTGCAGCTTAGATGTATTATCGGCTGCTTCAG  1991

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 1992  AGAAAGTCCTGGTGAGTGTTGCCGTGAACTCGGACAGTGCTTTGGGACGTCTGCAATCGTACCTCAGTATGCTT  2065

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2066  CTCCCTTCCATCATTCCTTAGTTTCCCATTTTACTTACACACAACATCCCCGTGCAACACCCAAATGTCACAGT  2139

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2140  CAGCTGGAGAGTCACAGAAATCAACAGTGGATTATGTGTTCACATTCCACAGCTGGTTCCAAGCACATTCCTGT  2213

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2214  TACACTGTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTACATTAAGCGCACTTGAGACATCTGAGAAGA  2287

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2288  TTTATGAATCATTTGACAGATGTTCACAACATCTCTTAAGAAATCAAATCCTATCGCCTTAGGAGCCAGAGAAA  2361

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2362  ATAAACATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACACTGCTAGTCAGGTGGAAGAAGGGCTGGTCC  2435

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2436  AGAAGAGCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGATGAGTCCGGGAACTGGGCACCAGCTTTGGA  2509

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2510  AAGGACTCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAAGCAGCATACTGAACAGTGGTGGGAGCGTC  2583

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2584  TTTCCTGAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCTCCCCAGCAGCTGCCTTTGCTGTTGGTAGT  2657

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2658  GGGGGCTGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGGGCTTTTCAGTGGTGTTGGGTTATGTTATG  2731

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2732  GTTAGCATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTACCGTGGTTGGCGCTGGTGTTATGGTGTTAG  2805

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2806  CACCAGGTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAGCATAGCTATAACACTGGTGTCAGGCCTGG  2879

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2880  CAGAGATCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGAGGAGGCAGTGAGTCTGTTTGGTGAGTGTG  2953

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 2954  CTGCCTCCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGCCTTGGGGCTTTAGAGGAAGTAGACACTGT  3027

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3028  CTGCCTGCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACACTGGTTTCCCCGCCGACCACATCTACCTCT  3101

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3102  CTGTGCGTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAACTTTTTCTCTTTTGCTTTAAAACTGTCTTT  3175

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3176  TGTTTTCAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTTAGTAACATGTCTGTGGCTACTTCTCCTTT  3249

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3250  TACACAAATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAAAATCAAAATTTGCTTTAATTTATGCTCAT  3323

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3324  TAGGATTGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACTGCCAATGTCTGTTTTATGTATTTGTTTGT  3397

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3398  CCAAATGTACCTATAAAAAGAATACATTAGACAGTTATGTTTACTCATTCCAACCTGGAATTGGTTTTAAACGG  3471

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3472  CTGGAACTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAAACGTTAAGGTTCTGTGGATTTTTTAAATT  3545

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3546  CTTCCCTATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCAGTGTTTATGCTAAAAACCAAATTTTTTCA  3619

Query  478  --------------------------------------------------------------------------  477
                                                                                      
Sbjct 3620  AAGAGATGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAAAATTTAAAAAAAAAATTCTATGATTAAAC  3693

Query  478  -----------------  477
                             
Sbjct 3694  AGAGAGTACTTGACGAA  3710

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