Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16026
- Subject:
- XR_387785.1
- Aligned Length:
- 3717
- Identities:
- 414
- Gaps:
- 3247
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA 222
Query 1 -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG 49
|||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct 223 ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG 296
Query 50 TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT 123
||.|||||||||..|..|||||.||.||||||||..|.||.|||||.||||||||||||||||||||.||||||
Sbjct 297 TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACT 370
Query 124 GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC 197
||.|||||||||||.||.|||||.||||||||.|||||||||||.|||||.|||||.||||||||||||||.||
Sbjct 371 GTGTCCTACATTGCCGTCGCAACGATATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGC 444
Query 198 TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT 271
..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct 445 ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT 518
Query 272 TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT 345
||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct 519 TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA 592
Query 346 CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC 419
||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 593 CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC 666
Query 420 CTTTGGAAGTTTTTTGGTAAGTAAACATAGTT-TAACT------------------------------------ 456
.|||||||||||||||| .|||.||| |.|||
Sbjct 667 ATTTGGAAGTTTTTTGG-------GCATTGTTGTGACTCCGGTGCTCCTGCTGCTTTTCCTCGGTTCATCCTCT 733
Query 457 ----TGTCTATTACAAC--TTTT------GCTG----------------------------------------- 477
||.||.|||||.| |||| ||||
Sbjct 734 TCGGTGCCTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTCCTCTTGTCATTGGACAGAATCA 807
Query 478 -------------------------------------------------------------------------- 477
Sbjct 808 CTTTGTGATGCCCAATTCCACTTCCTACATCTCAGCGAAGAGGCGACCTGTTGATCTCTGTGTTTCAGATCGTC 881
Query 478 -------------------------------------------------------------------------- 477
Sbjct 882 CGACGCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTGGTCAGCAGTAGCGTGCTACTCAT 955
Query 478 -------------------------------------------------------------------------- 477
Sbjct 956 GATCATCTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCTGGACAAGTTCAGCCTCATCCTCA 1029
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1030 TACTGTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCATCTTCTCCACACGGAATAACTCG 1103
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1104 GGGTTCACACCAGCAGACACAGTGGCTATCATCTTCTGCTCCACACACAAGTCCCTCACCTTGGGAATCCCAAT 1177
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1178 GCTGAAGATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCCCTTGCTCATCTACCACCCAGCTC 1251
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1252 AGATTCTCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGTCCAGGCAGAAGGGAGTGAAGCTG 1325
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1326 ACAAGGCCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTACATATATGTACAGGCTGTACATAC 1399
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1400 AGGGGTTCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTATTTTTTTACAGAAAAAAATATGAT 1473
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1474 ATACCTGTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAAACACACTCTGTTGGCTACTGCCA 1547
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1548 AGGGTAGTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAAGTTCTAGTAAGGGACAAAAGCTA 1621
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1622 ACACGTTTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTATAACGTTCAAAATGAGGTCATGCC 1695
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1696 ATCCAGAAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCACCGCACACTTTGATTCACCGAGT 1769
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1770 GGTTCTTTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGGGGATGCAGATCGCAGAGATGCCG 1843
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1844 AGAAGCGTCAGGTACCTCATTCCTTGACACCGTCTTCTTCCATCCATCCCCGCACACTCCAGAAACACTTCAGT 1917
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1918 CCCAGCACAGAGTGTGTGTGGGGGCTGGGGGGGGGGGGGGGAGTGCAGCTTAGATGTATTATCGGCTGCTTCAG 1991
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1992 AGAAAGTCCTGGTGAGTGTTGCCGTGAACTCGGACAGTGCTTTGGGACGTCTGCAATCGTACCTCAGTATGCTT 2065
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2066 CTCCCTTCCATCATTCCTTAGTTTCCCATTTTACTTACACACAACATCCCCGTGCAACACCCAAATGTCACAGT 2139
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2140 CAGCTGGAGAGTCACAGAAATCAACAGTGGATTATGTGTTCACATTCCACAGCTGGTTCCAAGCACATTCCTGT 2213
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2214 TACACTGTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTACATTAAGCGCACTTGAGACATCTGAGAAGA 2287
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2288 TTTATGAATCATTTGACAGATGTTCACAACATCTCTTAAGAAATCAAATCCTATCGCCTTAGGAGCCAGAGAAA 2361
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2362 ATAAACATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACACTGCTAGTCAGGTGGAAGAAGGGCTGGTCC 2435
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2436 AGAAGAGCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGATGAGTCCGGGAACTGGGCACCAGCTTTGGA 2509
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2510 AAGGACTCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAAGCAGCATACTGAACAGTGGTGGGAGCGTC 2583
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2584 TTTCCTGAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCTCCCCAGCAGCTGCCTTTGCTGTTGGTAGT 2657
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2658 GGGGGCTGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGGGCTTTTCAGTGGTGTTGGGTTATGTTATG 2731
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2732 GTTAGCATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTACCGTGGTTGGCGCTGGTGTTATGGTGTTAG 2805
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2806 CACCAGGTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAGCATAGCTATAACACTGGTGTCAGGCCTGG 2879
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2880 CAGAGATCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGAGGAGGCAGTGAGTCTGTTTGGTGAGTGTG 2953
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2954 CTGCCTCCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGCCTTGGGGCTTTAGAGGAAGTAGACACTGT 3027
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3028 CTGCCTGCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACACTGGTTTCCCCGCCGACCACATCTACCTCT 3101
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3102 CTGTGCGTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAACTTTTTCTCTTTTGCTTTAAAACTGTCTTT 3175
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3176 TGTTTTCAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTTAGTAACATGTCTGTGGCTACTTCTCCTTT 3249
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3250 TACACAAATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAAAATCAAAATTTGCTTTAATTTATGCTCAT 3323
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3324 TAGGATTGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACTGCCAATGTCTGTTTTATGTATTTGTTTGT 3397
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3398 CCAAATGTACCTATAAAAAGAATACATTAGACAGTTATGTTTACTCATTCCAACCTGGAATTGGTTTTAAACGG 3471
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3472 CTGGAACTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAAACGTTAAGGTTCTGTGGATTTTTTAAATT 3545
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3546 CTTCCCTATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCAGTGTTTATGCTAAAAACCAAATTTTTTCA 3619
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3620 AAGAGATGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAAAATTTAAAAAAAAAATTCTATGATTAAAC 3693
Query 478 ----------------- 477
Sbjct 3694 AGAGAGTACTTGACGAA 3710
