Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_16026
- Subject:
- XR_878921.1
- Aligned Length:
- 3740
- Identities:
- 416
- Gaps:
- 3266
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGGTGCGTGGTAGTGATGGCGGCGCTCAGCGAGGCTTTCCTGTCACTGGGTACTACTACTCCCAGCCCGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGCCGCCCGAGCCACCCCTCGGTCTTTAGTTTACGAGTGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATCGAGGAAAGTGTGGAGACGCCCCGGGGATTTAGGGATCGCAGTTTGGAAAGCAAGCCAGCCAAACAAATAA 222
Query 1 -------------------------ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAG 49
|||||||||||||||||...|||||||||.||||||||||||||.||||
Sbjct 223 ACAAAACCCACCCGCCCTAACAAATATGAGGCTGCTGGAGAGGGCGAGGAAAGAATGGTTCATGGTCGGGATAG 296
Query 50 TGCTGGCGATCGCTGGAGCTAAACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACT 123
||.|||||||||..|..|||||.||.||||||||..|.||.|||||.||||||||||||||||||||.||||||
Sbjct 297 TGGTGGCGATCGGCGCCGCTAAGCTCGAGCCGTCGGTCGGAGTGAACGGGGGACCACTGAAGCCAGAGATAACT 370
Query 124 GTATCCTACATTGCTGTTGCAACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGC 197
||.|||||||||||.||.|||||.||||||||.|||||||||||.|||||.|||||.||||||||||||||.||
Sbjct 371 GTGTCCTACATTGCCGTCGCAACGATATTCTTCAACAGTGGACTGTCATTAAAAACGGAGGAGCTGACCAGCGC 444
Query 198 TTTGGTGCATCTAAAACTGCATCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTT 271
..|||||||.||.|.||||||||||||.||.||.|||||.||.|||||.||||||||||||.||||||||||.|
Sbjct 445 ACTGGTGCACCTGAGACTGCATCTTTTCATCCAAATCTTCACACTTGCCTTCTTCCCAGCAGCAATATGGCTCT 518
Query 272 TTCTTCAGCTTTTATCAATCACACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCT 345
||||||||||.||||||.|||||.||||||||||.|||||||||||||||.||||||||||||||||||||||.
Sbjct 519 TTCTTCAGCTCTTATCAGTCACATCCATCAACGAGTGGCTTTTAAAAGGTCTGCAGACAGTAGGTTGCATGCCA 592
Query 346 CCGCCTGTGTCTTCTGCAGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGC 419
||.||||||||||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct 593 CCCCCTGTGTCTTCTGCCGTGATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCGATATTTAATTCAGC 666
Query 420 CTTTGGAAGTTTTTTGGTAAGTAAACATA------GTTTAACTTGTCT-----------ATTAC----AACTTT 472
.|||||||||||||||||||.||.|.|.| |||| ||||.| ||.|| |||||.
Sbjct 667 ATTTGGAAGTTTTTTGGTAATTATAGACAAGATGGGTTT---TTGTTTTGAAGCTCAAGATGACCTTAAACTTC 737
Query 473 TGCTG--------------------------------------------------------------------- 477
||||.
Sbjct 738 TGCTTCTAACCCTTTACCTGCGTATCCCATGTGCTGGAACTACAGGGCATTGTTGTGACTCCGGTGCTCCTGCT 811
Query 478 -------------------------------------------------------------------------- 477
Sbjct 812 GCTTTTCCTCGGTTCATCCTCTTCGGTGCCTTTTACATCCATTTTCTCTCAGCTGTTTATGACGGTGGTGGTTC 885
Query 478 -------------------------------------------------------------------------- 477
Sbjct 886 CTCTTGTCATTGGACAGATCGTCCGACGCTACATCAAGGACTGGCTGGAGAGGAAGAAGCCACCATTTGGTGTG 959
Query 478 -------------------------------------------------------------------------- 477
Sbjct 960 GTCAGCAGTAGCGTGCTACTCATGATCATCTACACCACCTTCTGTGACACCTTCTCCAACCCAAACATCGACCT 1033
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1034 GGACAAGTTCAGCCTCATCCTCATACTGTTCATAATAGTCTCCGTTCAGCTGAGCTTCATGCTTCTGACTTTCA 1107
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1108 TCTTCTCCACACGGAATAACTCGGGGTTCACACCAGCAGACACAGTGGCTATCATCTTCTGCTCCACACACAAG 1181
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1182 TCCCTCACCTTGGGAATCCCAATGCTGAAGATAGTGTTTGCAGGCCATGAGCATCTCTCGCTGATATCCGTGCC 1255
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1256 CTTGCTCATCTACCACCCAGCTCAGATTCTCCTGGGAAGTGTGTTAGTGCCAACAATAAAGTCTTGGATGGTGT 1329
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1330 CCAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAGTGTGACTCGGGTGGCGCCAGCCTTCCTGGAGTGTGTAC 1403
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1404 ATATATGTACAGGCTGTACATACAGGGGTTCTGAGGACCTGTCCTTGGGGATGCTGCTTTGATGCCTATTTTAT 1477
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1478 TTTTTTACAGAAAAAAATATGATATACCTGTTTAAGTGCCTTACGATGTTTTTGACAAGAGCGTTATTTCCAAA 1551
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1552 ACACACTCTGTTGGCTACTGCCAAGGGTAGTACAGTATTTTGGACTCATTTTTTTCCCTAAGGCAGAAAAAAAA 1625
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1626 GTTCTAGTAAGGGACAAAAGCTAACACGTTTTCTTCGTACTGCCTTTGTGCAGGCAAGACTCTAATAGCACTAT 1699
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1700 AACGTTCAAAATGAGGTCATGCCATCCAGAAACCTCCCTCCTGGTGACAGTGAACGATTCCAAAGTCTCATTCA 1773
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1774 CCGCACACTTTGATTCACCGAGTGGTTCTTTGTTTCTAAGACTGTGACGGGCTCTTCCTTATCAACTCAGCGGG 1847
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1848 GGATGCAGATCGCAGAGATGCCGAGAAGCGTCAGGTACCTCATTCCTTGACACCGTCTTCTTCCATCCATCCCC 1921
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1922 GCACACTCCAGAAACACTTCAGTCCCAGCACAGAGTGTGTGTGGGGGCTGGGGGGGGGGGGGGGAGTGCAGCTT 1995
Query 478 -------------------------------------------------------------------------- 477
Sbjct 1996 AGATGTATTATCGGCTGCTTCAGAGAAAGTCCTGGTGAGTGTTGCCGTGAACTCGGACAGTGCTTTGGGACGTC 2069
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2070 TGCAATCGTACCTCAGTATGCTTCTCCCTTCCATCATTCCTTAGTTTCCCATTTTACTTACACACAACATCCCC 2143
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2144 GTGCAACACCCAAATGTCACAGTCAGCTGGAGAGTCACAGAAATCAACAGTGGATTATGTGTTCACATTCCACA 2217
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2218 GCTGGTTCCAAGCACATTCCTGTTACACTGTTCCAAATCGTTCCTGTTGGCAAGACACAACCTGTTACATTAAG 2291
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2292 CGCACTTGAGACATCTGAGAAGATTTATGAATCATTTGACAGATGTTCACAACATCTCTTAAGAAATCAAATCC 2365
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2366 TATCGCCTTAGGAGCCAGAGAAAATAAACATGAGGCCGTGGGCATGAGCTAATGTTACATGTCCACACTGCTAG 2439
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2440 TCAGGTGGAAGAAGGGCTGGTCCAGAAGAGCAGGCAGGACCTTCCACTCACCGAGCTGTCAACAGGATGAGTCC 2513
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2514 GGGAACTGGGCACCAGCTTTGGAAAGGACTCCAGAAAAGCCTACGCTGAACCCAAACAAGAAGCTAAAGCAGCA 2587
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2588 TACTGAACAGTGGTGGGAGCGTCTTTCCTGAGCTTCCTGCTTAGTGTTGGAACAGGCATCACGGGTCTCCCCAG 2661
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2662 CAGCTGCCTTTGCTGTTGGTAGTGGGGGCTGTGGACCCACAATCAATCATTCCTTCAGAATTCCCTGGGCTTTT 2735
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2736 CAGTGGTGTTGGGTTATGTTATGGTTAGCATTGGTGTTGTAGATGATGGTAGTTTATGTCATAGTTACCGTGGT 2809
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2810 TGGCGCTGGTGTTATGGTGTTAGCACCAGGTCCTCTGTGTCACTGTCTCGGGACTTCATAATTCTGAGCATAGC 2883
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2884 TATAACACTGGTGTCAGGCCTGGCAGAGATCCACGCTGCACGGCCTGTGGGGACCATGCTGGGGACGAGGAGGC 2957
Query 478 -------------------------------------------------------------------------- 477
Sbjct 2958 AGTGAGTCTGTTTGGTGAGTGTGCTGCCTCCATGGAGCACAAAGGTTTTCAAGTCTCACCCCCACAGCCTTGGG 3031
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3032 GCTTTAGAGGAAGTAGACACTGTCTGCCTGCCAGAGTTGTAGACGCAACCCTTCCGTCATTTGAACACTGGTTT 3105
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3106 CCCCGCCGACCACATCTACCTCTCTGTGCGTGACTGCGACAAAGTTCAACTGAAGATGCTATGGTAACTTTTTC 3179
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3180 TCTTTTGCTTTAAAACTGTCTTTTGTTTTCAAACAAAACTGATTTATATCATGAGTTTTGGGAGCTTTAGTAAC 3253
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3254 ATGTCTGTGGCTACTTCTCCTTTTACACAAATATGATAGCATATTTTTCATGGTAAGGAAAAAAATAAAATCAA 3327
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3328 AATTTGCTTTAATTTATGCTCATTAGGATTGAACTGTCAGCTTAAAATACTTTCTATGTTTCTGCACTGCCAAT 3401
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3402 GTCTGTTTTATGTATTTGTTTGTCCAAATGTACCTATAAAAAGAATACATTAGACAGTTATGTTTACTCATTCC 3475
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3476 AACCTGGAATTGGTTTTAAACGGCTGGAACTTTAAGGAACGGCACTGCAGTCTTTACGCATGTTACAAACGTTA 3549
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3550 AGGTTCTGTGGATTTTTTAAATTCTTCCCTATTCTGTTTTAAACTGGCACACCTCTGGTTGACGCTCAGTGTTT 3623
Query 478 -------------------------------------------------------------------------- 477
Sbjct 3624 ATGCTAAAAACCAAATTTTTTCAAAGAGATGGCTAAGTAATTAAGTGGGTTATTTATAATGAATGGAAAATTTA 3697
Query 478 ---------------------------------------- 477
Sbjct 3698 AAAAAAAAATTCTATGATTAAACAGAGAGTACTTGACGAA 3737
