Nucleotide Global Alignment

Description

Query:
ccsbBroad304_16145
Subject:
XR_001747840.1
Aligned Length:
2271
Identities:
1472
Gaps:
799

Alignment

Query    1  -------------------------------------------ATGGGTCCTGGGGCGCGGCTGGCGGCGCTGC  31
                                                       |||||||||||||||||||||||||||||||
Sbjct    1  GCGCGGCCAGGACTGTCTGAGGGGAAGTTCGCGAGCGCTGGCTATGGGTCCTGGGGCGCGGCTGGCGGCGCTGC  74

Query   32  TGGCGGTGCTGGCGCTCGGGACAGGAGACCCAGAAAGGGCTGCGGCTCGGGGCGACACGTTCTCGGCGCTGACC  105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGGCGGTGCTGGCGCTCGGGACAGGAGACCCAGAAAGGGCTGCGGCTCGGGGCGACACGTTCTCGGCGCTGACC  148

Query  106  AGCGTGGCGCGCGCCCTGGCGCCCGAGCGCCGGCTGCTGGGGCTGCTGAGGCGGTACCTGCGCGGGGAGGAGGC  179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGCGTGGCGCGCGCCCTGGCGCCCGAGCGCCGGCTGCTGGGGCTGCTGAGGCGGTACCTGCGCGGGGAGGAGGC  222

Query  180  GCGGCTGCGGGACCTGACTAGATTCTACGACAAGGTACTTTCTTTGCATGAGGATTCAACAACCCCTGTGGCTA  253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCGGCTGCGGGACCTGACTAGATTCTACGACAAGGTACTTTCTTTGCATGAGGATTCAACAACCCCTGTGGCTA  296

Query  254  ACCCTCTGCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGACTGGAGGAATGTGGTACATAGTCTGGAGGCC  327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  ACCCTCTGCTTGCATTTACTCTCATCAAACGCCTGCAGTCTGACTGGAGGAATGTGGTACATAGTCTGGAGGCC  370

Query  328  AGTGAGAACATCCGAGCTCTGAAGGATGGCTATGAGAAGGTGGAGCAAGACCTTCCAGCCTTTGAGGACCTTGA  401
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGTGAGAACATCCGAGCTCTGAAGGATGGCTATGAGAAGGTGGAGCAAGACCTTCCAGCCTTTGAGGACCTTGA  444

Query  402  GGGAGCAGCAAGGGCCCTGATGCGGCTGCAGGACGTGTACATGCTCAATGTGAAAGGCCTGGCCCGAGGTGTCT  475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGGAGCAGCAAGGGCCCTGATGCGGCTGCAGGACGTGTACATGCTCAATGTGAAAGGCCTGGCCCGAGGTGTCT  518

Query  476  TTCAGAGAGTCACTGGCTCTGCCATCACTGACCTGTACAGCCCCAAACGGCTCTTTTCTCTCACAGGGGATGAC  549
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TTCAGAGAGTCACTGGCTCTGCCATCACTGACCTGTACAGCCCCAAACGGCTCTTTTCTCTCACAGGGGATGAC  592

Query  550  TGCTTCCAAGTTGGCAAGGTGGCCTATGACATGGGGGATTATTACCATGCCATTCCATGGCTGGAGGAGGCTGT  623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGCTTCCAAGTTGGCAAGGTGGCCTATGACATGGGGGATTATTACCATGCCATTCCATGGCTGGAGGAGGCTGT  666

Query  624  CAGTCTCTTCCGAGGATCTTACGGAGAGTGGAAGACAGAGGATGAGGCAAGTCTAGAAGATGCCTTGGATCACT  697
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAGTCTCTTCCGAGGATCTTACGGAGAGTGGAAGACAGAGGATGAGGCAAGTCTAGAAGATGCCTTGGATCACT  740

Query  698  TGGCCTTTGCTTATTTCCGGGCAGGAAATGTTTCGTGTGCCCTCAGCCTCTCTCGGGAGTTTCTTCTCTACAGC  771
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGGCCTTTGCTTATTTCCGGGCAGGAAATGTTTCGTGTGCCCTCAGCCTCTCTCGGGAGTTTCTTCTCTACAGC  814

Query  772  CCAGATAATAAGAGGATGGCCAGGAATGTCTTGAAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGT  845
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCAGATAATAAGAGGATGGCCAGGAATGTCTTGAAATATGAAAGGCTCTTGGCAGAGAGCCCCAACCACGTGGT  888

Query  846  AGCTGAGGCTGTCATCCAGAGGCCCAATATACCCCACCTGCAGACCAGAGACACCTACGAGGGGCTATGTCAGA  919
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGCTGAGGCTGTCATCCAGAGGCCCAATATACCCCACCTGCAGACCAGAGACACCTACGAGGGGCTATGTCAGA  962

Query  920  CCCTGGGTTCCCAGCCCACTCTCTACCAGATCCCTAGCCTCTACTGTTCCTATGAGACCAATTCCAACGCCTAC  993
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CCCTGGGTTCCCAGCCCACTCTCTACCAGATCCCTAGCCTCTACTGTTCCTATGAGACCAATTCCAACGCCTAC  1036

Query  994  CTGCTGCTCCAGCCCATCCGGAAGGAGGTCATCCACCTGGAGCCCTACATTGCTCTCTACCATGACTTCGTCAG  1067
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTGCTGCTCCAGCCCATCCGGAAGGAGGTCATCCACCTGGAGCCCTACATTGCTCTCTACCATGACTTCGTCAG  1110

Query 1068  TGACTCAGAGGCTCAGAAAATTAGAGAACTTGCAGAACCATGGCTACAGAGGTCAGTGGTGGCATCAGGGGAGA  1141
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TGACTCAGAGGCTCAGAAAATTAGAGAACTTGCAGAACCATGGCTACAGAGGTCAGTGGTGGCATCAGGGGAGA  1184

Query 1142  AGCAGTTACAAGTGGAGTACCGCATCAGCAAAAGTGCCTGGCTGAAGGACACTGTTAACCCAAAACTGGTGACC  1215
            |||||||||||||||||||||||||||||||||                                         
Sbjct 1185  AGCAGTTACAAGTGGAGTACCGCATCAGCAAAA-----------------------------------------  1217

Query 1216  CTCAACCACCGCATTGCTGCCCTCACAGGCCTTGATGTCCGGCCTCCCTATGCAGAGTATCTGCAGGTGGTGAA  1289
                                                                                      
Sbjct 1218  --------------------------------------------------------------------------  1217

Query 1290  CTATGGCATCGGAGGACACTATGAGCCTCACTTTGACCATGCTACGTCACCAAGCAGCCCCCTCTACAGAATGA  1363
                                                         |||||||||||||||||||||||||||||
Sbjct 1218  ---------------------------------------------GTCACCAAGCAGCCCCCTCTACAGAATGA  1246

Query 1364  AGTCAGGAAACCGAGTTGCAACATTTATGATCTATCTGAGCTCGGTGGAAGCTGGAGGAGCCACAGCCTTCATC  1437
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1247  AGTCAGGAAACCGAGTTGCAACATTTATGATCTATCTGAGCTCGGTGGAAGCTGGAGGAGCCACAGCCTTCATC  1320

Query 1438  TATGCCAACCTCAGCGTGCCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGG  1511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321  TATGCCAACCTCAGCGTGCCTGTGGTTAGGAATGCAGCACTGTTTTGGTGGAACCTGCACAGGAGTGGTGAAGG  1394

Query 1512  GGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGGTGGGAGATAAGTGGGTGGCCAACAAGTGGATACATG  1585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1395  GGACAGTGACACACTTCATGCTGGCTGTCCTGTCCTGGTGGGAGATAAGTGGGTGGCCAACAAGTGGATACATG  1468

Query 1586  AGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTGAAGAC---------------------------  1632
            |||||||||||||||||||||||||||||||||||||||||||||||                           
Sbjct 1469  AGTATGGACAGGAATTCCGCAGACCCTGCAGCTCCAGCCCTGAAGACTGAACTGTTGGCAGAGAGAAGCTGGTG  1542

Query 1633  --------------------------------------------------------------------------  1632
                                                                                      
Sbjct 1543  GAGTCCTGTGGCTTTCCAGAGAAGCCAGGAGCCAAAAGCTGGGGTAGGAGAGGAGAAAGCAGAGCAGCCTCCTG  1616

Query 1633  --------------------------------------------------------------------------  1632
                                                                                      
Sbjct 1617  GAAGAAGGCCTTGTCAGCTTTGTCTGTGCCTCGCAAATCAGAGGCAAGGGAGAGGTTGTTACCAGGGGACACTG  1690

Query 1633  --------------------------------------------------------------------------  1632
                                                                                      
Sbjct 1691  AGAATGTACATTTGATCTGCCCCAGCCACGGAAGTCAGAGTAGGATGCACAGTACAAAGGAGGGGGGAGTGGAG  1764

Query 1633  --------------------------------------------------------------------------  1632
                                                                                      
Sbjct 1765  GCCTGAGAGGGAAGTTTCTGGAGTTCAGATACTCTCTGTTGGGAACAGGACATCTCAACAGTCTCAGGTTCGAT  1838

Query 1633  --------------------------------------------------------------------------  1632
                                                                                      
Sbjct 1839  CAGTGGGTCTTTTGGCACTTTGAACCTTGACCACAGGGACCAAGAAGTGGCAATGAGGACACCTGCAGGAGGGG  1912

Query 1633  --------------------------------------------------------------------------  1632
                                                                                      
Sbjct 1913  CTAGCCTGACTCCCAGAACTTTAAGACTTTCTCCCCACTGCCTTCTGCTGCAGCCCAAGCAGGGAGTGTCCCCC  1986

Query 1633  --------------------------------------------------------------------------  1632
                                                                                      
Sbjct 1987  TCCCAGAAGCATATCCCAGATGAGTGGTACATTATATAAGGATTTTTTTTAAGTTGAAAACAACTTTCTTTTCT  2060

Query 1633  ---------------------------------------------------  1632
                                                               
Sbjct 2061  TTTTGTATGATGGTTTTTTAACACAGTCATTAAAAATGTTTATAAATCATT  2111

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