Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00016
Subject:
XM_006515385.2
Aligned Length:
2785
Identities:
2180
Gaps:
137

Alignment

Query    1  ------ATGG---TGGACTACCACGCGGCGAACCAGTCGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCGC  65
                  .|||   ||||||                ||.||||.|.|     |..||.||       ||.|||  
Sbjct    1  ATGAGTCTGGGTATGGACT----------------GTGGTACAACT-----CAAAGAAG-------AAAGGC--  44

Query   66  TGGCGGCGGGGGCAGCATGGGCGACTACATGGCCCAGGAGGACGACTGG-GACCGGGAC--CTGCTGC-TGGAC  135
                        |||..||       |||              ||.||| ||||.||||  .|.||.| |.||.
Sbjct   45  ------------CAGAGTG-------ACA--------------GAGTGGAGACCTGGACAGTTTCTTCGTCGAA  85

Query  136  CC--------GGCCTGGGA----GAAGC---AGCAGCGCA--AGACCTTCACGGCATGGTGCAACTCCCACCTG  192
            .|        |.|||.|||    |.|.|   .||.|.|.|  .|||.|||||.||.||||||||||||||||||
Sbjct   86  GCAGTATTTTGTCCTTGGAATTTGTAACTTGTGCTGAGGATGTGACGTTCACAGCCTGGTGCAACTCCCACCTG  159

Query  193  CGGAAGGCAGGCACACAGATCGAGAACATTGATGAGGACTTCCGAGACGGGCTCAAGCTCATGCTGCTCCTGGA  266
            ||.||.||.||.|||||||||||||||||.||.||||||||||||||.||.||.||||||||||||||||||||
Sbjct  160  CGCAAAGCGGGGACACAGATCGAGAACATCGAAGAGGACTTCCGAGATGGCCTGAAGCTCATGCTGCTCCTGGA  233

Query  267  GGTCATATCAGGGGAGCGGTTACCTAAGCCGGAGCGGGGGAAGATGAGAGTGCACAAAATCAACAATGTGAACA  340
            ||||||.|||||.||.||.||..|.|||||.|||.|.||.|||||||||||||||||.|||..|||.||.||||
Sbjct  234  GGTCATCTCAGGTGAACGCTTGGCCAAGCCAGAGAGAGGCAAGATGAGAGTGCACAAGATCTCCAACGTCAACA  307

Query  341  AAGCGCTGGACTTTATTGCCAGCAAAGGCGTCAAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGACGGCAAC  414
            |.||..||||.||.||.|||||||||||.|||||||||||.||||||||.||.|||||.||||||||.||.||.
Sbjct  308  AGGCCTTGGATTTCATAGCCAGCAAAGGGGTCAAGCTGGTGTCCATCGGAGCTGAAGAAATTGTGGATGGGAAT  381

Query  415  GCAAAGATGACCCTGGGAATGATCTGGACCATCATCCTTAGGTTCGCCATCCAGGACATCTCCGTGGAAGAGAC  488
            |..||||||||||||||.|||||||||||||||||.||..|.||.|||||||||||||||||||||||||||||
Sbjct  382  GTGAAGATGACCCTGGGCATGATCTGGACCATCATTCTCCGCTTTGCCATCCAGGACATCTCCGTGGAAGAGAC  455

Query  489  CTCGGCCAAGGAAGGGCTCCTTCTCTGGTGCCAGAGAAAGACAGCCCCGTATAAGAACGTCAATGTGCAGAACT  562
            .||.||.||.||||||.|.||.||.|||||.|||||.|||||||||||.|||||.||.|||||..|.||.||||
Sbjct  456  TTCAGCTAAAGAAGGGTTACTCCTGTGGTGTCAGAGGAAGACAGCCCCATATAAAAATGTCAACATCCAAAACT  529

Query  563  TCCACATCAGCTGGAAGGATGGTCTTGCCTTCAATGCCCTGATCCACCGGCACAGACCAGAGCTGATTGAGTAT  636
            ||||||||||.|||||.||||||||||..|||..||||.||||||||||.|||.|.||.|||.|||||||.|||
Sbjct  530  TCCACATCAGTTGGAAAGATGGTCTTGGTTTCTGTGCCTTGATCCACCGACACCGGCCCGAGTTGATTGACTAT  603

Query  637  GACAAGCTGAGGAAGGACGACCCTGTCACCAACCTGAACAATGCCTTCGAAGTGGCTGAGAAATACCTCGACAT  710
            |..|||||..|.|||||.||.||..||||.||||||||||..|||||.||.|||||.||||..|.|||.|||||
Sbjct  604  GGAAAGCTTCGAAAGGATGATCCACTCACAAACCTGAACACGGCCTTTGATGTGGCAGAGAGGTTCCTGGACAT  677

Query  711  CCCCAAGATGCTGGATGCAGAGGACATCGT--GAACACGGCCCGGCCCGACGAGAAGGCCATAATGACCTATGT  782
            |||.||||||||||||||.||.||||||||  ||  ||.||||||||.||.|||||.|||||.|||||.|||||
Sbjct  678  CCCTAAGATGCTGGATGCTGAAGACATCGTCGGA--ACTGCCCGGCCAGATGAGAAAGCCATTATGACTTATGT  749

Query  783  GTCCAGCTTCTACCATGCCTTTTCAGGAGCGCAGAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGGTGCTGG  856
            |||.||||||||.||||||||.||.|||||.||||||||.|||||.||.|||||.||.|||||.||.|||.|||
Sbjct  750  GTCTAGCTTCTATCATGCCTTCTCTGGAGCCCAGAAGGCAGAAACAGCAGCCAATCGCATCTGCAAAGTGTTGG  823

Query  857  CTGTCAACCAAGAGAACGAGCACCTGATGGAGGACTACGAGAAGCTGGCCAGCGACCTCCTGGAGTGGATCCGG  930
            |.|||||.||||||||||||||.||.|||||.|||||.||||||||||||||.||.||..|||||||||||||.
Sbjct  824  CGGTCAATCAAGAGAACGAGCAGCTTATGGAAGACTATGAGAAGCTGGCCAGTGATCTGTTGGAGTGGATCCGC  897

Query  931  CGCACCATCCCCTGGCTGGAGGACCGTGTGCCCCAAAAGACTATCCAGGAGATGCAGCAGAAGCTGGAGGACTT  1004
            |||||||||||.|||||||||.|.||.|||||..|.||.||.||.||.|..|||||||||||||||||||||||
Sbjct  898  CGCACCATCCCATGGCTGGAGAATCGGGTGCCTGAGAACACCATGCATGCCATGCAGCAGAAGCTGGAGGACTT  971

Query 1005  CCGCGACTACCGGCGTGTGCACAAGCCGCCCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGC  1078
            |||.|||||..|.||..|||||||||||||||||||||||||||||||||||||||||||||||||.|||||||
Sbjct  972  CCGAGACTATAGACGCCTGCACAAGCCGCCCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTTAACACGC  1045

Query 1079  TGCAGACCAAGCTGCGCCTCAGCAACCGGCCCGCCTTCATGCCCTCCGAGGGCAAGATGGTCTCGGACATCAAC  1152
            ||||||||||||||||.||||||||||||||.||||||||||||||||||||||.||||||||||||.||||||
Sbjct 1046  TGCAGACCAAGCTGCGGCTCAGCAACCGGCCTGCCTTCATGCCCTCCGAGGGCAGGATGGTCTCGGATATCAAC  1119

Query 1153  AATGGCT--GGCAGCACTTGGAGCAGGCTGAGAAGGGCTACGAGGAGTGGCTGCTGAATGAGATCCGCAGGCTG  1224
            ||||.||  |||.|  |.||||.|||||.||||||||||||||||||||||||||||||||||||||.|||||.
Sbjct 1120  AATGCCTGGGGCTG--CCTGGAACAGGCCGAGAAGGGCTACGAGGAGTGGCTGCTGAATGAGATCCGGAGGCTA  1191

Query 1225  GAGCGGCTCGACCACCTGGCAGAGAAGTTCCGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGACGGGAAGGA  1298
            |||.||.|.|||||||||||||||||||||||||||||||||||||||||.||.||||||||.||.||.||.||
Sbjct 1192  GAGAGGTTGGACCACCTGGCAGAGAAGTTCCGGCAGAAGGCCTCCATCCATGAAGCCTGGACGGATGGCAAAGA  1265

Query 1299  AGCCATGCTGAAGCACCGGGACTACGAGACGGCCACACTATCGGACATCAAAGCC---CTCATTCGCAAGCACG  1369
            |||||||||...|||...|||.||.|||||.|||||.||.||.||.|||||.|||   ||||   ..|||||||
Sbjct 1266  AGCCATGCTTCGGCAGAAGGATTATGAGACAGCCACCCTGTCCGAGATCAAGGCCTTGCTCA---AGAAGCACG  1336

Query 1370  AGGCCTTCGAGAGCGACCTGGCTGCGCACCAGGACCGCGTGGAGCAGATCGCCGCCATTGCCCAGGAGCTCAAC  1443
            ||||.||.|||||.||.||||||||.|||||||||||||||||||||||.||.|||||||||||||||||.||.
Sbjct 1337  AGGCTTTTGAGAGTGATCTGGCTGCCCACCAGGACCGCGTGGAGCAGATTGCGGCCATTGCCCAGGAGCTTAAT  1410

Query 1444  GAGCTGGATTACTACGACTC-CCACAATGTCAACACCCGGTGCCAGAAGATCTGTGACCAGTGGGACGCCCTCG  1516
            ||||||||.|||||.||||| ||| |.|||||||.|.||.|||||.|||||||||||||||||||||...||.|
Sbjct 1411  GAGCTGGACTACTATGACTCGCCA-AGTGTCAACGCTCGTTGCCAAAAGATCTGTGACCAGTGGGACAATCTAG  1483

Query 1517  GCTCTCTGACACATAGTCGCAGGGAAGCCCTGGAGAAAACAGAGAAGCAGCTGGAGGCCATCGACCAGCTGCAC  1590
            |..||||.||.||.|..||.||||||||..|.|||..|||||||||||.||||||..|||||||||||||..||
Sbjct 1484  GGGCTCTCACTCAGAAGCGGAGGGAAGCTTTAGAGCGAACAGAGAAGCTGCTGGAAACCATCGACCAGCTCTAC  1557

Query 1591  CTGGAATACGCCAAGCGCGCGGCCCCCTTCAACAACTGGATGGAGAGCGCCATGGAGGACCTCCAGGACATGTT  1664
            .|.||.|||||||||.|.||.||.|||||||||||.|||||||||.|.||||||||||||||.|||||||..||
Sbjct 1558  TTAGAGTACGCCAAGAGGGCTGCACCCTTCAACAATTGGATGGAGGGAGCCATGGAGGACCTGCAGGACACCTT  1631

Query 1665  CATCGTCCATACCATCGAGGAGATTGAGGGCCTGATCTCAGCCCATGACCAGTTCAAGTCCACCCTGCCGGACG  1738
            ||||||.|||||||||||||||||..||||.||||.|.||||||||||.|||||||||.|||||||.|||||.|
Sbjct 1632  CATCGTACATACCATCGAGGAGATCCAGGGACTGACCACAGCCCATGAGCAGTTCAAGGCCACCCTCCCGGATG  1705

Query 1739  CCGATAGGGAGCGCGAGGCCATCCTGGCCATCCACAAGGA---GGCCCAGAGGATCGCTGAGAGCAACCACATC  1809
            |.||.|.|||||||...|||||.||||.|||||||||.||   |.||   |.|||||...|||.|.|.||..||
Sbjct 1706  CAGACAAGGAGCGCCTCGCCATTCTGGGCATCCACAATGAAGTGTCC---AAGATCGTCCAGACCTATCATGTC  1776

Query 1810  AAGCTGTCGGGCAGCAACCCCTACACCACCGTCACCCCGCAAATCATCAACTCCAAGTGGGAGAAGGTGCAGCA  1883
            ||..||.|.||||.|||||||||.||.|||.||||.||.||....|||||...|||.|||||..|.||.|.|||
Sbjct 1777  AACATGGCAGGCACCAACCCCTATACAACCATCACGCCTCAGGAGATCAATGGCAAATGGGACCATGTACGGCA  1850

Query 1884  GCTGGTGCCAAAAC----GGGACCATGCCCTCCTGGAGGAGCAGAGCAA-GCAGCAGTCCAACGAGCACCTGCG  1952
            |||.|||||    |    |||||||.||.|||...|||||.|| .|||| |||||||..|||.|||...||.||
Sbjct 1851  GCTAGTGCC----CCGGAGGGACCAGGCTCTCACAGAGGAACA-TGCAAGGCAGCAGCACAATGAGAGGCTACG  1919

Query 1953  CCGCCAGTTCGCCAGC-CAGGCCAATGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGAGATCGGGCGCATC  2025
            |...|||||.|.| || ||.||||||||..|.||||||||||||||||||||||||||||||||.|||.|.||.
Sbjct 1920  CAAACAGTTTGGC-GCACAAGCCAATGTCATTGGGCCCTGGATCCAGACCAAGATGGAGGAGATTGGGAGGATT  1992

Query 2026  TCCATTGAGATGAACGGGACCCTGGAGGACCAGCTGAGCCACCTGAAGCAGTATGA-ACGCAGCATCGTGGACT  2098
            ||||||||||||.||||.||||||||||||||.||.|||||||||..||||||||| |.| ||||||||..|.|
Sbjct 1993  TCCATTGAGATGCACGGCACCCTGGAGGACCAACTCAGCCACCTGCGGCAGTATGAGAAG-AGCATCGTCAATT  2065

Query 2099  ACAAGCCCAACCTGGACCTGCTGGAGCAGC-AGCACCAGCTCATCCAGGAGGCCCTCATCTTCGACAACAAGCA  2171
            |||||||.||..|.||||.||||||| .|| |.||||||||||||||||||||.||.|||||.|||||.|||||
Sbjct 2066  ACAAGCCAAAGATTGACCAGCTGGAG-TGCGACCACCAGCTCATCCAGGAGGCACTTATCTTTGACAATAAGCA  2138

Query 2172  CACCAACTATACCATGGAGCACATCCGCGTGGGCTGGGAGCAGCTGCTCACCACCATTGCCCGCACCATCAACG  2245
            |||||||||.|.|||||||||.|||||.|||||||||||||||||||||||||||||||||.|.||||||||.|
Sbjct 2139  CACCAACTACAACATGGAGCATATCCGTGTGGGCTGGGAGCAGCTGCTCACCACCATTGCCAGGACCATCAATG  2212

Query 2246  AGGTGGAGAACCAGATCCTCACCCGCGACGCCAAGGGCATCAGCCAGGAGCAGATGCAGGAGTTCCGGGCGTCC  2319
            |.|||||||||||||||.|.|||||.||.|||||.||||||||||||||.||||||.|.||.|||||.||.||.
Sbjct 2213  AAGTGGAGAACCAGATCTTGACCCGGGATGCCAAAGGCATCAGCCAGGAACAGATGAACGAATTCCGCGCCTCT  2286

Query 2320  TTCAACCACTTCGACAAGGATCATGGCGGGGCGCTGGGGCCCGAGGAGTTCAAGGCCTGCCTCATCAGCCTGGG  2393
            |||||||||||.|||..||||||...|||..||.||||.|||||.||||||||.|||||||||||||||.||||
Sbjct 2287  TTCAACCACTTTGACCGGGATCACTCCGGCACGTTGGGTCCCGAAGAGTTCAAAGCCTGCCTCATCAGCTTGGG  2360

Query 2394  CTACGACGTGGAGAACGACCGGCAGGGTGAGGCCGAGTTCAACCGCATCATGAGCCTGGTCGACCCCAACCATA  2467
            .||.||..|.|..|||||||..|||||.|||||.|||||...|||.|||||||||.|.||.||||||||||   
Sbjct 2361  TTATGATATTGGCAACGACCCCCAGGGAGAGGCAGAGTTTGCCCGAATCATGAGCATTGTAGACCCCAACC---  2431

Query 2468  GC---GGCCTTGTGACCTTCCAAGCCTTCATCGACTTCATGTCGCGGGAGACCACCGACACGGACACGGCTGAC  2538
            ||   ||..|.|||||.|||||.||||||||||||||.|||||.||.|||||..|.||.||.||.||.||.||.
Sbjct 2432  GCTTGGGGGTAGTGACGTTCCAGGCCTTCATCGACTTTATGTCCCGAGAGACGGCAGATACTGATACTGCAGAT  2505

Query 2539  CAGGTCATCGCTTCCTTCAAGGTCTTAGCAGGGGACAAGAACTTCATCACAGCTGAGGAGCTGCGGAGAGAGCT  2612
            ||||||||.||||||||||||.||.|.||.||.||.|||||.|.||||||||..||.||||||||..|.|||||
Sbjct 2506  CAGGTCATGGCTTCCTTCAAGATCCTGGCTGGAGATAAGAATTACATCACAGAGGATGAGCTGCGCCGTGAGCT  2579

Query 2613  GCCCCCCGACCAGGCCGAGTACTGCATCGCCCGCATGGCGCCATACCAGGGCCCTGACGCCGTGCCCGGTGCCC  2686
            ||||||.|||||.|||||||||||||||||..|.|||||.||.|||..||||||.|||.|||||||||||||..
Sbjct 2580  GCCCCCTGACCAAGCCGAGTACTGCATCGCAAGAATGGCCCCCTACGCGGGCCCCGACTCCGTGCCCGGTGCTT  2653

Query 2687  TCGACTACAAGTCCTTCTCCACGGCCTTGTATGGCGAGAGCGACCTG  2733
            |.|||||||.|||||||||||||||..|||||||||||||||||||.
Sbjct 2654  TAGACTACATGTCCTTCTCCACGGCACTGTATGGCGAGAGCGACCTC  2700

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