Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00016
Subject:
XM_017021726.2
Aligned Length:
3292
Identities:
2184
Gaps:
707

Alignment

Query    1  ATGGTGGACTACCACGCGGCGAACCAGTCGTACCAGTACGGCCCCAGCAGCGCGGGCAATGGCGCTGGCGGCGG  74
                                                                      |||| |||.|||    
Sbjct    1  ----------------------------------------------------------ATGG-GCTTGCG----  11

Query   75  GGGCAGCATGGGCGACTACATGGCCCAGGAGGACGACTGGGACCGGGACCTGCTGCT-GGACCCGGCCTGGGAG  147
                           ||||                           |.|||||..|| .||||   ||.|||| 
Sbjct   12  ---------------CTAC---------------------------GTCCTGCCCCTCCGACC---CCCGGGA-  39

Query  148  AAGCAGCAGCGCAAGACCTTCACGGCATGGTGCAACTCCCACCTGCGGAAGGCAGGCACACAGATCGAGAACAT  221
                        |||||.||||||||||||||.|||||||||||.||||||||.||.|||||||||||||||||
Sbjct   40  ------------AAGACATTCACGGCATGGTGTAACTCCCACCTCCGGAAGGCGGGGACACAGATCGAGAACAT  101

Query  222  TGATGAGGACTTCCGAGACGGGCTCAAGCTCATGCTGCTCCTGGAGGTCATATCAGGGGAGCGGTTACCTAAGC  295
            .||.|||||||||||.||.||.||.||||||||||||||.|||||||||||.|||||.||.||.||..|.||||
Sbjct  102  CGAAGAGGACTTCCGGGATGGCCTGAAGCTCATGCTGCTGCTGGAGGTCATCTCAGGTGAACGCTTGGCCAAGC  175

Query  296  CGGAGCGGGGGAAGATGAGAGTGCACAAAATCAACAATGTGAACAAAGCGCTGGACTTTATTGCCAGCAAAGGC  369
            |.|||||.||.|||||||||||||||||.|||..|||.||.|||||.||.|||||.||.||.||||||||||||
Sbjct  176  CAGAGCGAGGCAAGATGAGAGTGCACAAGATCTCCAACGTCAACAAGGCCCTGGATTTCATAGCCAGCAAAGGC  249

Query  370  GTCAAGCTGGTCTCCATCGGGGCAGAAGAGATTGTGGACGGCAACGCAAAGATGACCCTGGGAATGATCTGGAC  443
            |||||.|||||.||||||||.||.|||||.||.|||||.||.||.|..||||||||||||||.|||||||||||
Sbjct  250  GTCAAACTGGTGTCCATCGGAGCCGAAGAAATCGTGGATGGGAATGTGAAGATGACCCTGGGCATGATCTGGAC  323

Query  444  CATCATCCTTAGGTTCGCCATCCAGGACATCTCCGTGGAAGAGACCTCGGCCAAGGAAGGGCTCCTTCTCTGGT  517
            |||||||||..|.||.|||||||||||||||||||||||||||||.||.||||||||||||||.||.||.||||
Sbjct  324  CATCATCCTGCGCTTTGCCATCCAGGACATCTCCGTGGAAGAGACTTCAGCCAAGGAAGGGCTGCTCCTGTGGT  397

Query  518  GCCAGAGAAAGACAGCCCCGTATAAGAACGTCAATGTGCAGAACTTCCACATCAGCTGGAAGGATGGTCTTGCC  591
            |.|||||||||||||||||.||.||.||.|||||..|.||||||||||||||.||||||||||||||.||.|.|
Sbjct  398  GTCAGAGAAAGACAGCCCCTTACAAAAATGTCAACATCCAGAACTTCCACATAAGCTGGAAGGATGGCCTCGGC  471

Query  592  TTCAATGCCCTGATCCACCGGCACAGACCAGAGCTGATTGAGTATGACAAGCTGAGGAAGGACGACCCTGTCAC  665
            |||..|||..||||||||||.|||.|.||.|||||||||||.||.|..||||||.|||||||.||.||..||||
Sbjct  472  TTCTGTGCTTTGATCCACCGACACCGGCCCGAGCTGATTGACTACGGGAAGCTGCGGAAGGATGATCCACTCAC  545

Query  666  CAACCTGAACAATGCCTTCGAAGTGGCTGAGAAATACCTCGACATCCCCAAGATGCTGGATGCAGAGGACATCG  739
            .||.|||||.|..||.||.||.|||||.|||||.|||||.|||||||||||||||||||||||.||.|||||||
Sbjct  546  AAATCTGAATACGGCTTTTGACGTGGCAGAGAAGTACCTGGACATCCCCAAGATGCTGGATGCCGAAGACATCG  619

Query  740  T--GAACACGGCCCGGCCCGACGAGAAGGCCATAATGACCTATGTGTCCAGCTTCTACCATGCCTTTTCAGGAG  811
            |  ||  ||.|||||.||.||.|||||.|||||.|||||.||.|||||.|||||||||||.|||||.||.||||
Sbjct  620  TTGGA--ACTGCCCGACCGGATGAGAAAGCCATCATGACTTACGTGTCTAGCTTCTACCACGCCTTCTCTGGAG  691

Query  812  CGCAGAAGGCTGAAACTGCCGCCAACCGGATCTGTAAGGTGCTGGCTGTCAACCAAGAGAACGAGCACCTGATG  885
            |.||||||||.||.||.||.|||||.||.|||||.||||||.||||.||||||||.|||||||||||.||.|||
Sbjct  692  CCCAGAAGGCGGAGACAGCAGCCAATCGCATCTGCAAGGTGTTGGCCGTCAACCAGGAGAACGAGCAGCTTATG  765

Query  886  GAGGACTACGAGAAGCTGGCCAGCGACCTCCTGGAGTGGATCCGGCGCACCATCCCCTGGCTGGAGGACCGTGT  959
            ||.||||||||||||||||||||.||.||..|||||||||||||.|||||.|||||.|||||||||.||||.||
Sbjct  766  GAAGACTACGAGAAGCTGGCCAGTGATCTGTTGGAGTGGATCCGCCGCACAATCCCGTGGCTGGAGAACCGGGT  839

Query  960  GCCCCAAAAGACTATCCAGGAGATGCAGCAGAAGCTGGAGGACTTCCGCGACTACCGGCGTGTGCACAAGCCGC  1033
            ||||.|.||.||.||.||.|..|||||.||||||||||||||||||||.|||||||||||..||||||||||||
Sbjct  840  GCCCGAGAACACCATGCATGCCATGCAACAGAAGCTGGAGGACTTCCGGGACTACCGGCGCCTGCACAAGCCGC  913

Query 1034  CCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCTGCGCCTCAGCAACCGG  1107
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  914  CCAAGGTGCAGGAGAAGTGCCAGCTGGAGATCAACTTCAACACGCTGCAGACCAAGCTGCGGCTCAGCAACCGG  987

Query 1108  CCCGCCTTCATGCCCTCCGAGGGCAAGATGGTCTCGGACATCAACAATGGCT--GGCAGCACTTGGAGCAGGCT  1179
            ||.||||||||||||||.|||||||.|||||||||||||||||||||||.||  |||.|  |.|||||||||..
Sbjct  988  CCTGCCTTCATGCCCTCTGAGGGCAGGATGGTCTCGGACATCAACAATGCCTGGGGCTG--CCTGGAGCAGGTG  1059

Query 1180  GAGAAGGGCTACGAGGAGTGGCTGCTGAATGAGATCCGCAGGCTGGAGCGGCTCGACCACCTGGCAGAGAAGTT  1253
            |||||||||||.|||||||||.||||||||||||||||.|||||||||||.||.||||||||||||||||||||
Sbjct 1060  GAGAAGGGCTATGAGGAGTGGTTGCTGAATGAGATCCGGAGGCTGGAGCGACTGGACCACCTGGCAGAGAAGTT  1133

Query 1254  CCGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGACGGGAAGGAAGCCATGCTGAAGCACCGGGACTACGAGA  1327
            |||||||||||||||||||||||||||||||||||||||.||.||.|||||||||...||...||||||.||||
Sbjct 1134  CCGGCAGAAGGCCTCCATCCACGAGGCCTGGACTGACGGCAAAGAGGCCATGCTGCGACAGAAGGACTATGAGA  1207

Query 1328  CGGCCACACTATCGGACATCAAAGCCCTCATTCGC-----AAGCACGAGGCCTTCGAGAGCGACCTGGCTGCGC  1396
            |.|||||.||.|||||.|||||.|||||     ||     |||||.||||||||||||||.|||||||||||.|
Sbjct 1208  CCGCCACCCTCTCGGAGATCAAGGCCCT-----GCTCAAGAAGCATGAGGCCTTCGAGAGTGACCTGGCTGCCC  1276

Query 1397  ACCAGGACCGCGTGGAGCAGATCGCCGCCATTGCCCAGGAGCTCAACGAGCTGGATTACTACGACTCCCACAAT  1470
            ||||||||||.|||||||||||.||||||||.||.|||||||||||.||||||||.||.||.|||||.|.||.|
Sbjct 1277  ACCAGGACCGTGTGGAGCAGATTGCCGCCATCGCACAGGAGCTCAATGAGCTGGACTATTATGACTCACCCAGT  1350

Query 1471  GTCAACACCCGGTGCCAGAAGATCTGTGACCAGTGGGACGCCCTCGGCTCTCTGACACATAGTCGCAGGGAAGC  1544
            ||||||.||||.|||||.|||||||||||||||||||||...||.||..|.||.||.||.|..||.||||||||
Sbjct 1351  GTCAACGCCCGTTGCCAAAAGATCTGTGACCAGTGGGACAATCTGGGGGCCCTAACTCAGAAGCGAAGGGAAGC  1424

Query 1545  CCTGGAGAAAACAGAGAAGCAGCTGGAGGCCATCGACCAGCTGCACCTGGAATACGCCAAGCGCGCGGCCCCCT  1618
            .||||||...||.|||||.|.|||||||.||||.|||||||||.||.||||.||.||||||||.||.||.||||
Sbjct 1425  TCTGGAGCGGACCGAGAAACTGCTGGAGACCATTGACCAGCTGTACTTGGAGTATGCCAAGCGGGCTGCACCCT  1498

Query 1619  TCAACAACTGGATGGAGAGCGCCATGGAGGACCTCCAGGACATGTTCATCGTCCATACCATCGAGGAGATTGAG  1692
            |||||||||||||||||.|.||||||||||||||.|||||||..|||||.||.||.|||||.||||||||..||
Sbjct 1499  TCAACAACTGGATGGAGGGGGCCATGGAGGACCTGCAGGACACCTTCATTGTGCACACCATTGAGGAGATCCAG  1572

Query 1693  GGCCTGATCTCAGCCCATGACCAGTTCAAGTCCACCCTGCCGGACGCCGATAGGGAGCGCGAGGCCATCCTGGC  1766
            ||.||||.|.||||||||||.|||||||||.|||||||.||.||.|||||.|.|||||||..|||||||||||.
Sbjct 1573  GGACTGACCACAGCCCATGAGCAGTTCAAGGCCACCCTCCCTGATGCCGACAAGGAGCGCCTGGCCATCCTGGG  1646

Query 1767  CATCCACAAGGAGG---CCCAGAGGATCGCTGAGAGCAACCACATCAAGCTGTCGGGCAGCAACCCCTACACCA  1837
            |||||||||.||||   ||   |.|||.|...|||.|.|||||.||||..||.||||||.||||||||||||.|
Sbjct 1647  CATCCACAATGAGGTGTCC---AAGATTGTCCAGACCTACCACGTCAATATGGCGGGCACCAACCCCTACACAA  1717

Query 1838  CCGTCACCCCGCAAATCATCAACTCCAAGTGGGAGAAGGTGCAGCAGCTGGTGCC----AAAACGGGACCATGC  1907
            ||.||||.||.||....|||||...|||.|||||..|.||||.||||||||||||    |    |||||||.||
Sbjct 1718  CCATCACGCCTCAGGAGATCAATGGCAAATGGGACCACGTGCGGCAGCTGGTGCCTCGGA----GGGACCAAGC  1787

Query 1908  CCTCCTGGAGGAGCA-----GAGCAAGCAGCAGTCCAACGAGCACCTGCGCCGCCAGTTCGCCAG-CCAGGCCA  1975
            .||...|||||||||     ||     ||||||..|||.|||...||.|||...|||||.| .|| ||||||||
Sbjct 1788  TCTGACGGAGGAGCATGCCCGA-----CAGCAGCACAATGAGAGGCTACGCAAGCAGTTTG-GAGCCCAGGCCA  1855

Query 1976  ATGTTGTGGGGCCCTGGATCCAGACCAAGATGGAGGAGATCGGGCGCATCTCCATTGAGATGAACGGGACCCTG  2049
            ||||..|.||||||||||||||||||||||||||||||||||||.|.|||||||||||||||.|.|||||||||
Sbjct 1856  ATGTCATCGGGCCCTGGATCCAGACCAAGATGGAGGAGATCGGGAGGATCTCCATTGAGATGCATGGGACCCTG  1929

Query 2050  GAGGACCAGCTGAGCCACCTGAAGCAGTATGA-ACGCAGCATCGTGGACTACAAGCCCAACCTGGACCTGCTGG  2122
            |||||||||||.|||||||||..||||||||| |.| ||||||||..||||||||||.||..|.||.|.|||||
Sbjct 1930  GAGGACCAGCTCAGCCACCTGCGGCAGTATGAGAAG-AGCATCGTCAACTACAAGCCAAAGATTGATCAGCTGG  2002

Query 2123  AGCAGC-AGCACCAGCTCATCCAGGAGGCCCTCATCTTCGACAACAAGCACACCAACTATACCATGGAGCACAT  2195
            || .|| |.||||||||||||||||||||.|||||||||||||||||||||||||||||.||||||||||||||
Sbjct 2003  AG-GGCGACCACCAGCTCATCCAGGAGGCGCTCATCTTCGACAACAAGCACACCAACTACACCATGGAGCACAT  2075

Query 2196  CCGCGTGGGCTGGGAGCAGCTGCTCACCACCATTGCCCGCACCATCAACGAGGTGGAGAACCAGATCCTCACCC  2269
            |||.|||||||||||||||||||||||||||||.|||.|.||||||||.|||||.||||||||||||||.||||
Sbjct 2076  CCGTGTGGGCTGGGAGCAGCTGCTCACCACCATCGCCAGGACCATCAATGAGGTAGAGAACCAGATCCTGACCC  2149

Query 2270  GCGACGCCAAGGGCATCAGCCAGGAGCAGATGCAGGAGTTCCGGGCGTCCTTCAACCACTTCGACAAGGATCAT  2343
            |.||.|||||||||||||||||||||||||||.|.|||||||||||.||||||||||||||.|||..||||||.
Sbjct 2150  GGGATGCCAAGGGCATCAGCCAGGAGCAGATGAATGAGTTCCGGGCCTCCTTCAACCACTTTGACCGGGATCAC  2223

Query 2344  GGCGGGGCGCTGGGGCCCGAGGAGTTCAAGGCCTGCCTCATCAGCCTG------------GGCTACGAC-----  2400
            ..|||..|.|||||.||||||||||||||.|||||||||||||||.||            |||.|||||     
Sbjct 2224  TCCGGCACACTGGGTCCCGAGGAGTTCAAAGCCTGCCTCATCAGCTTGGGTTATGATATTGGCAACGACCCCCA  2297

Query 2401  ---------------------------------GTGG-----------AGAA----------------------  2408
                                             ||||           ||||                      
Sbjct 2298  GGTACTCGCCTCCTGCATGGAGCACGCTCAGGGGTGGCGTCTGGGGCAAGAAATAATGCGTTTTTCCTTTTTCT  2371

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2372  CTTCTCTCTGTCTGGATCTCCTGTCCCCCTCCTGTGGGCCATGGGGCTCGTCCTCTCCTGCTGTCTCTGTCTGC  2445

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2446  CCCATCACTGGTCCACCCTCTGCCCTCTGCTGTCTTTCATGGCAACCTACTGGGTGCCCGCTGTCTTCCGTCCT  2519

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2520  CGCTGCTCTTCATCCCATGGGTGGATTTTTGCATCTCCCTGCTCTGTCTTCCTCCTGTCTTTGGACATTTCCAC  2593

Query 2409  --------------------------------------------------------------------------  2408
                                                                                      
Sbjct 2594  CGATGTGTGTTCGCATCTTCTCCTATGTTCCTTTACCTATCCTGACCCCCAAAACCATAAATCTCATCCCCGTT  2667

Query 2409  ----------------------------------------------------------CGACC-----------  2413
                                                                      |||||           
Sbjct 2668  CTGGCCATCTGTTCCTGTCTTCCTGGCCCCGGGCCGGCCCTTCCTCTTCCTGCCTTCCCGACCCTCCTTGTGTC  2741

Query 2414  -------------------------------GGCA---------------------------------------  2417
                                           ||||                                       
Sbjct 2742  TTGGTACCACTGCCCCCCACAGAAGAAGACAGGCATGATGGACACGGATGATTTCCGCGCCTGCCTGATCTCCA  2815

Query 2418  -------------GGGTGAGGCCGAGTTCAACCGCATCATGAGCCTGGTCGACCCCAACCATAGC---GGCCTT  2475
                         |||.||.||.||.||...|||||||||||||.|.||.||||||||||   ||   ||..|.
Sbjct 2816  TGGGTTACAACATGGGAGAAGCAGAATTTGCCCGCATCATGAGCATTGTGGACCCCAACC---GCCTGGGGGTA  2886

Query 2476  GTGACCTTCCAAGCCTTCATCGACTTCATGTCGCGGGAGACCACCGACACGGACACGGCTGACCAGGTCATCGC  2549
            |||||.|||||.||||||||.|||||||||||.||.|||||..|||||||.||.||.||.|||||.|||||.||
Sbjct 2887  GTGACATTCCAGGCCTTCATTGACTTCATGTCCCGCGAGACAGCCGACACAGATACAGCAGACCAAGTCATGGC  2960

Query 2550  TTCCTTCAAGGTCTTAGCAGGGGACAAGAACTTCATCACAGCTGAGGAGCTGCGGAGAGAGCTGCCCCCCGACC  2623
            ||||||||||.||.|.||.|||||||||||||.|||.||....||.||||||||..|.||||||||.|||||||
Sbjct 2961  TTCCTTCAAGATCCTGGCTGGGGACAAGAACTACATTACCATGGACGAGCTGCGCCGCGAGCTGCCACCCGACC  3034

Query 2624  AGGCCGAGTACTGCATCGCCCGCATGGCGCCATACCAGGGCCCTGACGCCGTGCCCGGTGCCCTCGACTACAAG  2697
            ||||.||||||||||||||.||.|||||.||.|||...|||||.|||.|||||||.|||||.||.|||||||.|
Sbjct 3035  AGGCTGAGTACTGCATCGCGCGGATGGCCCCCTACACCGGCCCCGACTCCGTGCCAGGTGCTCTGGACTACATG  3108

Query 2698  TCCTTCTCCACGGCCTTGTATGGCGAGAGCGACCTG  2733
            ||||||||||||||..||||.||||||||.|||||.
Sbjct 3109  TCCTTCTCCACGGCGCTGTACGGCGAGAGTGACCTC  3144