Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00051
- Subject:
- NM_001031615.2
- Aligned Length:
- 1308
- Identities:
- 1015
- Gaps:
- 168
Alignment
Query 1 ATGGACCCCCTTGGGGACACGCTGCGGCGACTGCGGGAGGCCTTCCACGCGGGGCGCACGCGGCCAGCTGAGTT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CCGGGCTGCGCAGCTCCAAGGCCTGGGCCGCTTCCTGCAAGAAAACAAGCAGCTTCTGCACGACGCACTGGCCC 148
|..|||.| ||.||.|| ||.||
Sbjct 1 -------------------------------------------ATGAAGGA-----TGAACCAC-----GGTCC 21
Query 149 A-GGACCTGCACAAGGCCACGCAGCTGGACTCCGCCTTCATCCGGAAGGAGCCCTTTGGCCTGGTCCTCATCAT 221
| |.|||| |..||.|.||||||||||.|.|||||||.|||||||.|||||||||||||||||||||||
Sbjct 22 ACGAACCT------GTTCATGAAGCTGGACTCGGTCTTCATCTGGAAGGAACCCTTTGGCCTGGTCCTCATCAT 89
Query 222 TGCGCCCTGGAACTATCCGCTGAACCTGACGCTGGTGCCCCTCGTGGGAGCCCTCGCTGCAGGGAACTGTGTGG 295
.||.|||||||||||.||.|||||||||||.|||||||.|||.|||||.||||||||.|||||||..||.||||
Sbjct 90 CGCACCCTGGAACTACCCACTGAACCTGACCCTGGTGCTCCTGGTGGGCGCCCTCGCCGCAGGGAGTTGCGTGG 163
Query 296 TGCTGAAGCCATCGGAGATTAGCAAGAACGTCGAGAAGATCCTGGCCGAGGTGCTGCCCCAATACGTGGACCAG 369
||||||||||.||.||.||.|||.||..|...||||||.|||||||.||||||||||||||.|||.||||||||
Sbjct 164 TGCTGAAGCCGTCAGAAATCAGCCAGGGCACAGAGAAGGTCCTGGCTGAGGTGCTGCCCCAGTACCTGGACCAG 237
Query 370 AGCTGCTTTGCTGTGGTGCTGGGCGGGCCCCAGGAGACGGGGCAGCTGCTAGAGCACAGGTTCGACTACATCTT 443
|||||||||||.||||||||||||||.|||||||||||.|||||||||||||||||||.|||.|||||||||||
Sbjct 238 AGCTGCTTTGCCGTGGTGCTGGGCGGACCCCAGGAGACAGGGCAGCTGCTAGAGCACAAGTTGGACTACATCTT 311
Query 444 CTTCACAGGGAGCCCTCGTGTGGGCAAGATTGTTATGACTGCTGCCGCCAAGCACCTGACACCTGTCACCCTGG 517
|||||||||||||||||||||||||||||||||.||||||||||||.|||||||||||||.|||||||||||||
Sbjct 312 CTTCACAGGGAGCCCTCGTGTGGGCAAGATTGTCATGACTGCTGCCACCAAGCACCTGACGCCTGTCACCCTGG 385
Query 518 AGCTGGGGGGCAAGAACCCTTGCTACGTGGACGACAACTGCGACCCCCAGACCGTGGCCAACCGCGTGGCCTGG 591
|||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 386 AGCTGGGGGGCAAGAACCCCTGCTACGTGGACGACAACTGCGACCCCCAGACCGTGGCCAACCGCGTGGCCTGG 459
Query 592 TTCCGCTACTTCAACGCCGGCCAGACCTGCGTGGCCCCCGACTACGTCCTATGCAGCCCTGAGATGCAGGAGAG 665
|||.||||||||||.|||||||||||||||||||||||.|||||||||||.||||||||.||||||||||||||
Sbjct 460 TTCTGCTACTTCAATGCCGGCCAGACCTGCGTGGCCCCTGACTACGTCCTGTGCAGCCCCGAGATGCAGGAGAG 533
Query 666 GCTGCTGCCTGCCCTGCAGAGCACCATCACCCGTTTCTATGGCGACGACCCCCAGAGCTCCCCAAACCTGGGCC 739
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 534 GCTGCTGCCCGCCCTGCAGAGCACCATCACCCGTTTCTATGGCGACGACCCCCAGAGCTCCCCAAACCTGGGCC 607
Query 740 GCATCATCAACCAGAAACAGTTCCAGCGGCTGCGGGCATTGCTGGGCTGCGGCCGTGTGGCCATTGGGGGCCAG 813
.||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 608 ACATCATCAACCAGAAACAGTTCCAGCGGCTGCGGGCATTGCTGGGCTGCGGCCGCGTGGCCATTGGGGGCCAG 681
Query 814 AGCGATGAGAGCGATCGCTACATCGCCCCCACGGTGCTGGTGGATGTGCAGGAGATGGAGCCTGTGATGCAGGA 887
|||.|.||||||||||||||||||||||||||||||||||||||.||||||||||.||||||||||||||||||
Sbjct 682 AGCAACGAGAGCGATCGCTACATCGCCCCCACGGTGCTGGTGGACGTGCAGGAGACGGAGCCTGTGATGCAGGA 755
Query 888 GGAGATCTTCGGGCCCATCCTGCCCATCGTGAACGTGCAGAGCTTGGACGAGGCCATCGAGTTCATCAACCGGC 961
|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||
Sbjct 756 GGAGATCTTCGGGCCCATCCTGCCCATCGTGAACGTGCAGAGCGTGGACGAGGCCATCAAGTTCATCAACCGGC 829
Query 962 GGGAGAAGCCCCTGGCCCTGTACGCCTTCTCCAACAGCAGCCAGGTGGTCAAGCGGGTGCTGACCCAGACCAGC 1035
.|||||||||||||||||||||||||||||||||||||||||||||.||.||.|.|.|||||...|.|||||||
Sbjct 830 AGGAGAAGCCCCTGGCCCTGTACGCCTTCTCCAACAGCAGCCAGGTTGTGAACCAGATGCTGGAGCGGACCAGC 903
Query 1036 AGCGGGGGCTTCTGTGGGAACGACGGCTTCATGCACATGACCCTGGCCAG--CCTGCCTTTTGGAGGAGTGGGT 1107
|||||..||||..|.||.||.||.|||||||...||||..|.||| |.| |.||||.||.||.|||||.||.
Sbjct 904 AGCGGCAGCTTTGGAGGCAATGAGGGCTTCACCTACATATCTCTG--CTGTCCGTGCCATTCGGGGGAGTCGGC 975
Query 1108 GCCAGTGGGATGGGCCGGTACCATGGCAAGTTCTCCTTCGACACCTTCTCCCACCATCGCGCCTGCCTCCTGCG 1181
..|||||||||||||||||||||.|||||||||.||||||||||||||||||||||.|||.|||||||.|| ||
Sbjct 976 CACAGTGGGATGGGCCGGTACCACGGCAAGTTCACCTTCGACACCTTCTCCCACCACCGCACCTGCCTGCT-CG 1048
Query 1182 CAGCC-CGGGGATGGAGAAGCTCAACGCCCTCCGCTACCCGCCGCAATCGCCGCGCCGCCTG-----AGGATGC 1249
|..|| |.||..|||||||..|.||.|...|||.||||||.|| |.|| .|||.||| ||.| ||
Sbjct 1049 CCCCCTCCGGCCTGGAGAAATTAAAGGAGATCCACTACCCACC-CTAT------ACCGACTGGAACCAGCA-GC 1114
Query 1250 T-----GCTGGTGGCCATGGAGGC-CCAAGGCTGCAGCTGCACACTGCTC 1293
| |||| ||.|||| ||| ||.|| ||||||||.||.||.
Sbjct 1115 TGTTACGCTG--GGGCATG--GGCTCCCAG-----AGCTGCACCCTCCTG 1155