Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00076
Subject:
XM_006507231.1
Aligned Length:
2132
Identities:
1922
Gaps:
10

Alignment

Query    1  ATGTCTGTTCCATCATCACTGAGCCAGTCGGCCATTAATGCCAACAGCCACGGAGGCCCCGCACTGAGCCTACC  74
            |||||||||||||||||.||||||||||||||||||||.||.|||||||||||||||||.|||||.|||.|.||
Sbjct    1  ATGTCTGTTCCATCATCCCTGAGCCAGTCGGCCATTAACGCTAACAGCCACGGAGGCCCTGCACTCAGCTTCCC  74

Query   75  CCTGCCTCTGCACGCTGCCCACAACCAGCTGCTCAACGCCAAGCTGCAGGCCACAGCTGTGGGACCCAAGGACC  148
            |.|.||.||||||||||||||.||||||||||||||||||||||||||.|||||||||||||.|||||||||||
Sbjct   75  CTTACCCCTGCACGCTGCCCATAACCAGCTGCTCAACGCCAAGCTGCAAGCCACAGCTGTGGTACCCAAGGACC  148

Query  149  TGCGCAGCGCCATGGGGGAGGGTGGTGGGCCTGAGCCAGGCCCTGCCAATGCCAAGTGGCTAAAAGAGGGCCAG  222
            |.||.||.||.|||||.||||||.|||.||||||.||||||||||||||||||||||||.||||.||.||||||
Sbjct  149  TTCGAAGTGCTATGGGAGAGGGTAGTGTGCCTGAACCAGGCCCTGCCAATGCCAAGTGGTTAAAGGAAGGCCAG  222

Query  223  AACCAGCTCCGGCGGGCCGCCACGGCCCACCGTGACCAGAATCGCAATGTGACCTTGACCTTGGCGGAGGAGGC  296
            ||||||||.|||.||||.|||||.||||||||.||||||||.||.|||||||||||||||||||||||||||||
Sbjct  223  AACCAGCTTCGGAGGGCTGCCACAGCCCACCGAGACCAGAACCGAAATGTGACCTTGACCTTGGCGGAGGAGGC  296

Query  297  CAGCCAGGAGCCTGAGATGGCACCCTTGGGCCCCAAAGGCCTGATACACCTGTACTCTGAGCTGGAGCTCTCAG  370
            ||||||||||.||||||.||||||.|||||.|||||||||.|.||.||.||.||||||||||||||||||||.|
Sbjct  297  CAGCCAGGAGGCTGAGACGGCACCTTTGGGTCCCAAAGGCTTAATGCATCTATACTCTGAGCTGGAGCTCTCGG  370

Query  371  CTCACAACGCAGCCAACCGAGGCCTACGAGGACCTGGCCTGATCATCAGCACTCAAGAGCAGGGGCCAGATGAG  444
            |.|||||.||||||||||||||.||.|..|||.|.|.|.|||||||||.|||.||.||.|||||.||||||||.
Sbjct  371  CCCACAATGCAGCCAACCGAGGGCTTCATGGATCCGCCTTGATCATCAACACCCAGGAACAGGGACCAGATGAA  444

Query  445  GGAGAGGAGAAGGCGGCCGGGGAGGCCGAGGAGGAGGAGGAGGATGATGATGATGAAGAGGAGGAGGAGGACTT  518
            ||||||||||||||.||.||.|||||.||||||||.||.||.||.||.||.||.||.|||||||||||||||||
Sbjct  445  GGAGAGGAGAAGGCAGCAGGAGAGGCTGAGGAGGATGATGAAGACGAAGAGGAGGAGGAGGAGGAGGAGGACTT  518

Query  519  ATCTTCTCCCCCAGGGCTGCCTGAGCCCCTGGAGAGTGTGG-AGGCCCCTCCCAGGCCCCAAGCCCTTACAGAT  591
            .||||||||.||||||||.||||||||.|||||||.||||| ||.||||| |..|||||||.|||||.|||||.
Sbjct  519  GTCTTCTCCTCCAGGGCTACCTGAGCCTCTGGAGAATGTGGAAGTCCCCT-CTGGGCCCCAGGCCCTCACAGAC  591

Query  592  GGCCCCCGGGAACACAGCAAGAGTGCCAGCCTCCTGTTTGGCATGCGGAACAGTGCAGCCAGTGATGAGGACTC  665
            ||||||||||||||||||||||||||.||||||||.|||||||||||.||||||||||||||||||||||||||
Sbjct  592  GGCCCCCGGGAACACAGCAAGAGTGCTAGCCTCCTATTTGGCATGCGAAACAGTGCAGCCAGTGATGAGGACTC  665

Query  666  AAGCTGGGCTACCTTATCCCAGGGCAGCCCCTCCTATGGCTCCCCAGAGGACACAGATTCCTTCTGGAACCCCA  739
            |||||||||.||||||||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct  666  AAGCTGGGCCACCTTATCACAGGGCAGCCCCTCCTATGGCTCCCCGGAGGACACAGATTCCTTCTGGAACCCCA  739

Query  740  ACGCCTTCGAGACGGATTCCGACCTGCCGGCTGGATGGATGAGGGTCCAGGACACCTCAGGGACCTATTACTGG  813
            ||||.|||||||||||||||||.||.||||||||||||||||||||.||||||||||||||||||||.||||||
Sbjct  740  ACGCTTTCGAGACGGATTCCGATCTACCGGCTGGATGGATGAGGGTACAGGACACCTCAGGGACCTACTACTGG  813

Query  814  CACATCCCAACAGGGACCACCCAGTGGGAACCCCCCGGCCGGGCCTCCCCCTCACAGGGGAGCAGCCCCCAAGA  887
            |||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct  814  CACATCCCAACAGGGACCACCCAGTGGGAACCCCCAGGCCGGGCCTCCCCCTCACAGGGGAGCAGCCCCCAAGA  887

Query  888  GGAGTCCCAGCTCACCTGGACAGGTTTTGCTCATGGAGAAGGCTTTGAGGATGGAGAATTTTGGAAGGATGAAC  961
            .||||||||||||||||||||.||.||||||||...|||||||||||||||.|||||.||||||||||||||||
Sbjct  888  AGAGTCCCAGCTCACCTGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAAGGAGAGTTTTGGAAGGATGAAC  961

Query  962  CCAGTGATGAGGCCCCAATGGAGCTGGGACTGAAGGAACCTGAGGAGGGGACGTTGACCTTCCCAGCTCAGAGC  1035
            |||||||.|||||||||||||||.|||||||||||||.||.|||||||.|||.|||.|||||||||||||||||
Sbjct  962  CCAGTGAGGAGGCCCCAATGGAGTTGGGACTGAAGGACCCCGAGGAGGCGACATTGTCCTTCCCAGCTCAGAGC  1035

Query 1036  CTCAGCCCAGAGCC-GTTGCCCCAAGAGGAGGAGAAGCTTCCCCCACGGAATACCAACCCAGGGATCAAGTGTT  1108
            |||||||||||.|| ||| |||||.|||||.||||||||..|||.|||||||.|||||||||||||||||||||
Sbjct 1036  CTCAGCCCAGAACCAGTT-CCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGGATCAAGTGTT  1108

Query 1109  TCGCCGTGCGCTCCCTAGGCTGGGTAGAGATGACCGAGGAGGAGCTGGCCCCTGGACGCAGCAGTGTGGCAGTC  1182
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||
Sbjct 1109  TCGCTGTGCGCTCCCTAGGCTGGGTAGAGATGACCGAGGAGGAGCTGGCCCCAGGACGCAGCAGTGTGGCAGTC  1182

Query 1183  AACAATTGCATCCGTCAGCTCTCTTACCACAAAAACAACCTGCATGACCCCATGTCTGGGGGCTGGGGGGAAGG  1256
            ||||||||.|||||.||||||||.||||||||||||||.||.|||||.||.|||.|||||||||||||.||.||
Sbjct 1183  AACAATTGTATCCGCCAGCTCTCCTACCACAAAAACAATCTACATGATCCGATGGCTGGGGGCTGGGGAGAGGG  1256

Query 1257  AAAGGATCTGCTACTGCAGCTGGAGGATGAGACACTAAAGCTAGTGGAGCCACAGAGCCAGGCACTGCTGCACG  1330
            ||||||||||||.||.|||||||||||.|||||.||||||.|.|||||||||||||.||||.|.||||||||.|
Sbjct 1257  AAAGGATCTGCTGCTCCAGCTGGAGGACGAGACTCTAAAGTTGGTGGAGCCACAGAACCAGACGCTGCTGCATG  1330

Query 1331  CCCAACCCATCATCAGCATCCGCGTGTGGGGCGTCGGGCGGGACAGTGGA------AGGGACTTTGCCTACGTA  1398
            |.||.||||||.|||||||.||.|||||||||||.|||||||||||||||      ||||||||||||||||||
Sbjct 1331  CACAGCCCATCGTCAGCATTCGTGTGTGGGGCGTTGGGCGGGACAGTGGAAGAGAGAGGGACTTTGCCTACGTA  1404

Query 1399  GCTCGTGATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCGCTGTGAGGCACCTGCCAAGAACATCGCCAC  1472
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1405  GCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCGCTGTGAGGCACCTGCCAAGAACATCGCCAC  1478

Query 1473  CAGCCTGCATGAGATCTGCTCTAAGATCATGGCCGAACGGCGTAATGCCCGCTGCTTGGTAAATGGACTCTCCC  1546
            |||||||||||||||||||||.|||||||||.|.||||||||.|||||.|||||||||||.|||||||||||||
Sbjct 1479  CAGCCTGCATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAATGGACTCTCCC  1552

Query 1547  TGGACCACTCTAAACTTGTGGATGTCCCTTTCCAAGTGGAATTCCCAGCGCCTAAGAATGAGTTGGTCCAGAAG  1620
            |.||||||||||||||.||||||||||||||||||||||||||||||||.||.|||||||||.||||.||||||
Sbjct 1553  TAGACCACTCTAAACTCGTGGATGTCCCTTTCCAAGTGGAATTCCCAGCACCAAAGAATGAGCTGGTGCAGAAG  1626

Query 1621  TTCCAAGTCTATTACCTGGGGAATGTACCTGTTGCTAAACCTGTTGGGGTAGATGTGATTAATGGGGCCCTCGA  1694
            ||||||||||||||||||||.|||||.||.|||||||||||||||||||||||.|||||||||||||||||.||
Sbjct 1627  TTCCAAGTCTATTACCTGGGAAATGTGCCAGTTGCTAAACCTGTTGGGGTAGACGTGATTAATGGGGCCCTGGA  1700

Query 1695  GTCAGTCCTGTCCTCCAGCAGCCGTGAACAATGGACCCCAAGTCATGTCAGTGTGGCCCCTGCTACCCTCACCA  1768
            ||||||||||||.|||||.||||||||.||.|||||.||||||||.|||||.|||||||||||.||||||||||
Sbjct 1701  GTCAGTCCTGTCTTCCAGTAGCCGTGAGCAGTGGACTCCAAGTCACGTCAGCGTGGCCCCTGCCACCCTCACCA  1774

Query 1769  TCTTGCACCAGCAGACAGAGGCAGTGCTGGGAGAGTGTCGGGTGCGTTTCCTCTCCTTCCTGGCCGTGGGCAGA  1842
            |||||||||||||||||||.||.||||||||.|||||.||||||||.||.||||||||||||||.|||||||||
Sbjct 1775  TCTTGCACCAGCAGACAGAAGCGGTGCTGGGGGAGTGCCGGGTGCGGTTTCTCTCCTTCCTGGCTGTGGGCAGA  1848

Query 1843  GATGTCCACACGTTTGCATTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGCCACATGTTCTGGTGCGAGCC  1916
            |||||.|||||.||.||.|||||||||||||||||||||||||||||||||||.||||||||.|||||.|||||
Sbjct 1849  GATGTGCACACATTCGCGTTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGTCACATGTTTTGGTGTGAGCC  1922

Query 1917  CAATGCTGCCAGCCTCTCAGAGGCTGTGCAGGCTGCGTGCATGCTTCGCTACCAGAAGTGTCTGGATGCCCGTT  1990
            ||||||||||||.|||||||||||||||||||||||.||||||||.|||||||||||||||||||||||.||.|
Sbjct 1923  CAATGCTGCCAGTCTCTCAGAGGCTGTGCAGGCTGCATGCATGCTCCGCTACCAGAAGTGTCTGGATGCTCGCT  1996

Query 1991  CCCAGGCCTCCACCTCCTGCCTCCCAGCACCCCCTGCTGAGTCTGTGGCACGGCGTGTAGGGTGGACTGTCCGC  2064
            |||||.|||||||||||||||||||||||||||||||.|||||.||.|||.|.||||||||||||||.||||||
Sbjct 1997  CCCAGACCTCCACCTCCTGCCTCCCAGCACCCCCTGCGGAGTCAGTTGCAAGACGTGTAGGGTGGACAGTCCGC  2070

Query 2065  AGGGGTGTTCAGTCGCTGTGGGGCTCCCTGAAGCCCAAACGGCTGGGGGCCCATACCCCA  2124
            |||||||||||||||||||||||.|||||.|||||||||||.|||||..||||.||||||
Sbjct 2071  AGGGGTGTTCAGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGGATCCCAGACCCCA  2130

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