Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00076
Subject:
XM_006507232.3
Aligned Length:
2142
Identities:
1374
Gaps:
630

Alignment

Query    1  ATGTCTGTTCCATCATCACTGAGCCAGTCGGCCATTAATGCCAACAGCCACGGAGGCCCCGCACTGAGCCTACC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CCTGCCTCTGCACGCTGCCCACAACCAGCTGCTCAACGCCAAGCTGCAGGCCACAGCTGTGGGACCCAAGGACC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCGCAGCGCCATGGGGGAGGGTGGTGGGCCTGAGCCAGGCCCTGCCAATGCCAAGTGGCTAAAAGAGGGCCAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AACCAGCTCCGGCGGGCCGCCACGGCCCACCGTGACCAGAATCGCAATGTGACCTTGACCTTGGCGGAGGAGGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAGCCAGGAGCCTGAGATGGCACCCTTGGGCCCCAAAGGCCTGATACACCTGTACTCTGAGCTGGAGCTCTCAG  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CTCACAACGCAGCCAACCGAGGCCTACGAGGACCTGGCCTGATCATCAGCACTCAAGAGCAGGGGCCAGATGAG  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  GGAGAGGAGAAGGCGGCCGGGGAGGCCGAGGAGGAGGAGGAGGATGATGATGATGAAGAGGAGGAGGAGGACTT  518
                                                                            |.|||  ||.
Sbjct    1  ----------------------------------------------------------------ATGAG--CTC  8

Query  519  ATCTT-CTCCCCCAGGGCTGCCTGAGCCCC--TGGAG-------AGTGTGGAGGCCCCTCCCAGGCCCCAAGCC  582
            .|||| |||.||||  .||.|   |.||||  .||||       |||.|||.||     .|..||||||     
Sbjct    9  CTCTTCCTCACCCA--TCTCC---ATCCCCCAAGGAGGTTCCTTAGTATGGTGG-----TCTTGGCCCC-----  67

Query  583  CTTACAGATGGCCCCCGGGAACACAGCAAGAGTGCCAGCCTCCTGTTTGGCATGCGGAACAGTGCAGCCAGTGA  656
                      .|||.||.||||.|                          ||.|||                ||
Sbjct   68  ----------TCCCTCGAGAACTC--------------------------CAGGCG----------------GA  89

Query  657  TGAGGA-CTCAAGCTGGGCTACCTTATCCCAGGGCAGCCCCTCCTATGGCTCCCCAGAGGACACAGATTCCTTC  729
            .||||| ||          |.|||        |||||.|.|||   ||             |.|.|||||||||
Sbjct   90  GGAGGATCT----------TGCCT--------GGCAGACGCTC---TG-------------CCCTGATTCCTTC  129

Query  730  TGGAACCCCAACGCCTTCGAGACGGATTCCGACCTGCCGGCTGGATGGATGAGGGTCCAGGACACCTCAGGGAC  803
            ||||||||||||||.|||||||||||||||||.||.||||||||||||||||||||.|||||||||||||||||
Sbjct  130  TGGAACCCCAACGCTTTCGAGACGGATTCCGATCTACCGGCTGGATGGATGAGGGTACAGGACACCTCAGGGAC  203

Query  804  CTATTACTGGCACATCCCAACAGGGACCACCCAGTGGGAACCCCCCGGCCGGGCCTCCCCCTCACAGGGGAGCA  877
            |||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct  204  CTACTACTGGCACATCCCAACAGGGACCACCCAGTGGGAACCCCCAGGCCGGGCCTCCCCCTCACAGGGGAGCA  277

Query  878  GCCCCCAAGAGGAGTCCCAGCTCACCTGGACAGGTTTTGCTCATGGAGAAGGCTTTGAGGATGGAGAATTTTGG  951
            ||||||||||.||||||||||||||||||||.||.||||||||...|||||||||||||||.|||||.||||||
Sbjct  278  GCCCCCAAGAAGAGTCCCAGCTCACCTGGACTGGCTTTGCTCACCAAGAAGGCTTTGAGGAAGGAGAGTTTTGG  351

Query  952  AAGGATGAACCCAGTGATGAGGCCCCAATGGAGCTGGGACTGAAGGAACCTGAGGAGGGGACGTTGACCTTCCC  1025
            |||||||||||||||||.|||||||||||||||.|||||||||||||.||.|||||||.|||.|||.|||||||
Sbjct  352  AAGGATGAACCCAGTGAGGAGGCCCCAATGGAGTTGGGACTGAAGGACCCCGAGGAGGCGACATTGTCCTTCCC  425

Query 1026  AGCTCAGAGCCTCAGCCCAGAGCC-GTTGCCCCAAGAGGAGGAGAAGCTTCCCCCACGGAATACCAACCCAGGG  1098
            |||||||||||||||||||||.|| ||| |||||.|||||.||||||||..|||.|||||||.|||||||||||
Sbjct  426  AGCTCAGAGCCTCAGCCCAGAACCAGTT-CCCCAGGAGGAAGAGAAGCTGTCCCAACGGAATGCCAACCCAGGG  498

Query 1099  ATCAAGTGTTTCGCCGTGCGCTCCCTAGGCTGGGTAGAGATGACCGAGGAGGAGCTGGCCCCTGGACGCAGCAG  1172
            ||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  499  ATCAAGTGTTTCGCTGTGCGCTCCCTAGGCTGGGTAGAGATGACCGAGGAGGAGCTGGCCCCAGGACGCAGCAG  572

Query 1173  TGTGGCAGTCAACAATTGCATCCGTCAGCTCTCTTACCACAAAAACAACCTGCATGACCCCATGTCTGGGGGCT  1246
            ||||||||||||||||||.|||||.||||||||.||||||||||||||.||.|||||.||.|||.|||||||||
Sbjct  573  TGTGGCAGTCAACAATTGTATCCGCCAGCTCTCCTACCACAAAAACAATCTACATGATCCGATGGCTGGGGGCT  646

Query 1247  GGGGGGAAGGAAAGGATCTGCTACTGCAGCTGGAGGATGAGACACTAAAGCTAGTGGAGCCACAGAGCCAGGCA  1320
            ||||.||.||||||||||||||.||.|||||||||||.|||||.||||||.|.|||||||||||||.||||.|.
Sbjct  647  GGGGAGAGGGAAAGGATCTGCTGCTCCAGCTGGAGGACGAGACTCTAAAGTTGGTGGAGCCACAGAACCAGACG  720

Query 1321  CTGCTGCACGCCCAACCCATCATCAGCATCCGCGTGTGGGGCGTCGGGCGGGACAGTGGA------AGGGACTT  1388
            ||||||||.||.||.||||||.|||||||.||.|||||||||||.|||||||||||||||      ||||||||
Sbjct  721  CTGCTGCATGCACAGCCCATCGTCAGCATTCGTGTGTGGGGCGTTGGGCGGGACAGTGGAAGAGAGAGGGACTT  794

Query 1389  TGCCTACGTAGCTCGTGATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCGCTGTGAGGCACCTGCCAAGA  1462
            |||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  795  TGCCTACGTAGCTCGAGATAAGCTGACCCAGATGCTCAAGTGCCACGTGTTTCGCTGTGAGGCACCTGCCAAGA  868

Query 1463  ACATCGCCACCAGCCTGCATGAGATCTGCTCTAAGATCATGGCCGAACGGCGTAATGCCCGCTGCTTGGTAAAT  1536
            |||||||||||||||||||||||||||||||.|||||||||.|.||||||||.|||||.|||||||||||.|||
Sbjct  869  ACATCGCCACCAGCCTGCATGAGATCTGCTCCAAGATCATGTCTGAACGGCGCAATGCTCGCTGCTTGGTCAAT  942

Query 1537  GGACTCTCCCTGGACCACTCTAAACTTGTGGATGTCCCTTTCCAAGTGGAATTCCCAGCGCCTAAGAATGAGTT  1610
            |||||||||||.||||||||||||||.||||||||||||||||||||||||||||||||.||.|||||||||.|
Sbjct  943  GGACTCTCCCTAGACCACTCTAAACTCGTGGATGTCCCTTTCCAAGTGGAATTCCCAGCACCAAAGAATGAGCT  1016

Query 1611  GGTCCAGAAGTTCCAAGTCTATTACCTGGGGAATGTACCTGTTGCTAAACCTGTTGGGGTAGATGTGATTAATG  1684
            |||.||||||||||||||||||||||||||.|||||.||.|||||||||||||||||||||||.||||||||||
Sbjct 1017  GGTGCAGAAGTTCCAAGTCTATTACCTGGGAAATGTGCCAGTTGCTAAACCTGTTGGGGTAGACGTGATTAATG  1090

Query 1685  GGGCCCTCGAGTCAGTCCTGTCCTCCAGCAGCCGTGAACAATGGACCCCAAGTCATGTCAGTGTGGCCCCTGCT  1758
            |||||||.||||||||||||||.|||||.||||||||.||.|||||.||||||||.|||||.|||||||||||.
Sbjct 1091  GGGCCCTGGAGTCAGTCCTGTCTTCCAGTAGCCGTGAGCAGTGGACTCCAAGTCACGTCAGCGTGGCCCCTGCC  1164

Query 1759  ACCCTCACCATCTTGCACCAGCAGACAGAGGCAGTGCTGGGAGAGTGTCGGGTGCGTTTCCTCTCCTTCCTGGC  1832
            |||||||||||||||||||||||||||||.||.||||||||.|||||.||||||||.||.||||||||||||||
Sbjct 1165  ACCCTCACCATCTTGCACCAGCAGACAGAAGCGGTGCTGGGGGAGTGCCGGGTGCGGTTTCTCTCCTTCCTGGC  1238

Query 1833  CGTGGGCAGAGATGTCCACACGTTTGCATTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGCCACATGTTCT  1906
            .||||||||||||||.|||||.||.||.|||||||||||||||||||||||||||||||||||.||||||||.|
Sbjct 1239  TGTGGGCAGAGATGTGCACACATTCGCGTTCATCATGGCTGCCGGCCCAGCCTCCTTCTGCTGTCACATGTTTT  1312

Query 1907  GGTGCGAGCCCAATGCTGCCAGCCTCTCAGAGGCTGTGCAGGCTGCGTGCATGCTTCGCTACCAGAAGTGTCTG  1980
            ||||.|||||||||||||||||.|||||||||||||||||||||||.||||||||.||||||||||||||||||
Sbjct 1313  GGTGTGAGCCCAATGCTGCCAGTCTCTCAGAGGCTGTGCAGGCTGCATGCATGCTCCGCTACCAGAAGTGTCTG  1386

Query 1981  GATGCCCGTTCCCAGGCCTCCACCTCCTGCCTCCCAGCACCCCCTGCTGAGTCTGTGGCACGGCGTGTAGGGTG  2054
            |||||.||.||||||.|||||||||||||||||||||||||||||||.|||||.||.|||.|.|||||||||||
Sbjct 1387  GATGCTCGCTCCCAGACCTCCACCTCCTGCCTCCCAGCACCCCCTGCGGAGTCAGTTGCAAGACGTGTAGGGTG  1460

Query 2055  GACTGTCCGCAGGGGTGTTCAGTCGCTGTGGGGCTCCCTGAAGCCCAAACGGCTGGGGGCCCATACCCCA  2124
            |||.|||||||||||||||||||||||||||||.|||||.|||||||||||.|||||..||||.||||||
Sbjct 1461  GACAGTCCGCAGGGGTGTTCAGTCGCTGTGGGGTTCCCTCAAGCCCAAACGTCTGGGATCCCAGACCCCA  1530

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