Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00100
Subject:
NM_001042679.1
Aligned Length:
597
Identities:
463
Gaps:
36

Alignment

Query   1  ATGGCTGCCATCCGGAAGAAACTGGTGATTGTTGGTGATGGAGCCTGTGGAAAGACATGCTTGCTCATAGTCTT  74
           ||||||||.|||||.|||||.||||||||.|||||.|||||.||||||||.|||||.|||.|.|||||.|||||
Sbjct   1  ATGGCTGCAATCCGAAAGAAGCTGGTGATCGTTGGGGATGGTGCCTGTGGGAAGACCTGCCTCCTCATCGTCTT  74

Query  75  CAGCAAGGACCAGTTCCCAGAGGTGTATGTGCCCACAGTGTTTGAGAACTATGTGGCAGATATCGAGGTGGATG  148
           |||||||||.|||||.||.|||||.||.||.||.||.||.||||||||||||.|.||.||.||.||||||||.|
Sbjct  75  CAGCAAGGATCAGTTTCCGGAGGTCTACGTCCCTACTGTCTTTGAGAACTATATTGCGGACATTGAGGTGGACG  148

Query 149  GAAAGCAGGTAGAGTTGGCTTTGTGGGACACAGCTGGGCAGGAAGATTATGATCGCCTGAGGCCCCTCTCCTAC  222
           |.||||||||.|||.|||||.|||||||||||||.|||||||||||.||||||||.|||.||||.|||||||||
Sbjct 149  GCAAGCAGGTGGAGCTGGCTCTGTGGGACACAGCAGGGCAGGAAGACTATGATCGACTGCGGCCTCTCTCCTAC  222

Query 223  CCAGATACCGATGTTATACTGATGTGTTTTTCCATCGACAGCCCTGATAGTTTAGAAAACATCCCAGAAAAGTG  296
           ||.||.||.|||||.||.||.|||||.||.|||||||||||||||||.||..|.||||||||.||.||.|||||
Sbjct 223  CCGGACACTGATGTCATCCTCATGTGCTTCTCCATCGACAGCCCTGACAGCCTGGAAAACATTCCTGAGAAGTG  296

Query 297  GACCCCAGAAGTCAAGCATTTCTGTCCCAACGTGCCCATCATCCTGGTTGGGAATAAGAAGGATCTTCGGAATG  370
           |||||||||.||.|||||.|||||.|||||||||||||||||||||||.||||||||||||||.||..||.|.|
Sbjct 297  GACCCCAGAGGTGAAGCACTTCTGCCCCAACGTGCCCATCATCCTGGTGGGGAATAAGAAGGACCTGAGGCAAG  370

Query 371  ATGAGCACACAAGGCGGGAGCTAGCCAAGATGAAGCAGGAGC-----CGGTGAAACCTGAAGAAGGCAGAGATA  439
           |.||||||||.|||.|.|||||.|||||||||||||||||||     ||||     ||||.||||||.|.||.|
Sbjct 371  ACGAGCACACCAGGAGAGAGCTGGCCAAGATGAAGCAGGAGCCCGTTCGGT-----CTGAGGAAGGCCGGGACA  439

Query 440  TGGCAAACAGGATTGGCGCTTTTGGGTACATGGAGTGTTCAGCAAAGACCAAAGATGGAGTGAGAGAGGTTTTT  513
           ||||.|||.||||..|.||.|||||.|||.|.|||||.|||||.||||||||.||.||||||.|.|||||.|||
Sbjct 440  TGGCGAACCGGATCAGTGCCTTTGGCTACCTTGAGTGCTCAGCCAAGACCAAGGAGGGAGTGCGGGAGGTGTTT  513

Query 514  GAAATGGCTACGAGAGCT--------GCTCTGCAAG--CTAGACGTGGGAAGAAAAAATCTGGGTG---CCTTG  574
           ||.|||||.||..|.|||        |.||.|||||  |.|| |||.|||.|         ||.||   |.||.
Sbjct 514  GAGATGGCCACTCGGGCTGGCCTCCAGGTCCGCAAGAACAAG-CGTCGGAGG---------GGCTGTCCCATTC  577

Query 575  TCTTG  579
           ||   
Sbjct 578  TC---  579