Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00308
- Subject:
- XM_006532004.3
- Aligned Length:
- 1507
- Identities:
- 1115
- Gaps:
- 224
Alignment
Query 1 ATGACCCCAGGGGCTCTGCTGATGCTGCTGGGGGCGCTGGGGGCGCCGCTCGCCCCAGGCGTCCGCGGCTCGGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGCGGAGGGTCGACTCCGGGAGAAACTTTTCTCTGGCTATGATAGCTCCGTGCGGCCAGCGCGGGAGGTGGGAG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACCGTGTCAGGGTCAGCGTTGGTCTCATCCTGGCGCAACTCATCAGCCTGAACGAGAAGGATGAAGAGATGAGC 222
||||||
Sbjct 1 --------------------------------------------------------------------ATGAGC 6
Query 223 ACAAAGGTGTACTTAGACCTGGAGTGGACTGACTACAGGCTGAGCTGGGACCCTGCGGAGCACGACGGCATCGA 296
|||||||||||||||||||||||||||||.|||||||||.|.|||||||||||.||.||.||.||.||||||||
Sbjct 7 ACAAAGGTGTACTTAGACCTGGAGTGGACCGACTACAGGTTAAGCTGGGACCCCGCAGAACATGATGGCATCGA 80
Query 297 TTCGCTCCGCATCACGGCGGAATCCGTGTGGCTCCCTGACGTGGTGCTACTGAACAACAATGATGGGAATTTTG 370
|||.|||||||||||.||.||||||||.|||||||||||.||||||||.||||||||||||||.||.|||||.|
Sbjct 81 TTCTCTCCGCATCACTGCTGAATCCGTTTGGCTCCCTGATGTGGTGCTGCTGAACAACAATGACGGAAATTTCG 154
Query 371 ACGTGGCTCTGGACATTAGCGTCGTGGTGTCCTCCGACGGCTCCGTGCGTTGGCAACCCCCGGGCATCTATCGC 444
||||.||.||||||||.|..||.|||||.||.|.|||.|||||.|||||.|||||||||||.|||.|.||.|||
Sbjct 155 ACGTTGCCCTGGACATCAATGTTGTGGTATCTTTCGAGGGCTCTGTGCGCTGGCAACCCCCTGGCCTGTACCGC 228
Query 445 AGCAGCTGCAGCATCCAGGTCACCTACTTCCCCTTCGACTGGCAGAATTGCACTATGGTGTTCAGCTCCTACAG 518
|||||||||||||||||||||||||||||||||||.|||||||||||.|||||.||||||||.||.||||||||
Sbjct 229 AGCAGCTGCAGCATCCAGGTCACCTACTTCCCCTTTGACTGGCAGAACTGCACCATGGTGTTTAGTTCCTACAG 302
Query 519 CTACGACAGCTCGGAGGTCAGCCTGCAGACAGGCCTGGGTCCTGACG----GGCAAGGGCATCAGGAAATCCAC 588
|||.||||||||.||||||||||||.||||.|||||||.||||||.| ||..||| ||||||.||.||
Sbjct 303 CTATGACAGCTCTGAGGTCAGCCTGAAGACGGGCCTGGATCCTGAAGGAGAGGAGAGG----CAGGAAGTCTAC 372
Query 589 ATTCATGAAGGGACTTTCATTGAGAATGGCCAGTGGGAGATTATCCACAAGCCCTCTCGGCTAATCCAGCCTCC 662
||||||||||||||.|||||||||||||||||.|||||||||||||||||.||.|||.||.|||||||.|.|||
Sbjct 373 ATTCATGAAGGGACCTTCATTGAGAATGGCCAATGGGAGATTATCCACAAACCTTCTAGGTTAATCCAACTTCC 446
Query 663 AGGCGATCCTAGGGGAGGGAGGGAAGGACAGCGCCAGGAAGTCATCTTCTACCTCATCATCCGCCGCAAGCCTC 736
|||.||||..||.||.||||.||||||.||.|...|||||||.||||||||.|||||.||.||.||.|||||||
Sbjct 447 AGGGGATCAGAGAGGTGGGAAGGAAGGGCATCATGAGGAAGTTATCTTCTATCTCATTATTCGGCGGAAGCCTC 520
Query 737 TCTTCTACCTGGTCAACGTCATTGCCCCATGCATCCTCATCACTCTTCTGGCCATCTTCGTCTTCTACCTGCCA 810
|||||||||||||||||||||||||||||||||||||||||||.||.|||||||||||.|||||||||||.|||
Sbjct 521 TCTTCTACCTGGTCAACGTCATTGCCCCATGCATCCTCATCACGCTCCTGGCCATCTTTGTCTTCTACCTCCCA 594
Query 811 CCAGATGCAGGAGAGAAGATGGGGCTCTCAATCTTTGCCCTGCTGACCCTTACTGTGTTCCTGCTGCTGCTGGC 884
|||||||||||||||||||||||||||||.|||||||||||||||||.||.|||||||||.||||||||.||||
Sbjct 595 CCAGATGCAGGAGAGAAGATGGGGCTCTCCATCTTTGCCCTGCTGACGCTCACTGTGTTCTTGCTGCTGTTGGC 668
Query 885 TGACAAAGTACCTGAGACCTCACTATCAGTACCCATTATTATCAAGTACCTCATGTTTACCATGGTCCTCGTCA 958
.||||||||.|||||||||||.||..|.||.|||||.||||||||||||||||||||||||||||||||.||||
Sbjct 669 CGACAAAGTGCCTGAGACCTCCCTGGCGGTGCCCATCATTATCAAGTACCTCATGTTTACCATGGTCCTTGTCA 742
Query 959 CCTTCTCAGTCATCCTTAGTGTCGTGGTTCTCAACCTGCACCACCGCTCACCCCACACCCACCAAATGCCCCTT 1032
|||||||.||.|||||||||||.|||||.|||||||||||.||.|||||||||||||||||||||||||||.||
Sbjct 743 CCTTCTCCGTTATCCTTAGTGTTGTGGTCCTCAACCTGCATCATCGCTCACCCCACACCCACCAAATGCCCTTT 816
Query 1033 TGGGTCCGTCAGATCTTCATTCACAAACTTCCGCTGTACCTGCGTCTAAAAAGGCCCAAACCCGAGAGAGACCT 1106
||||||||.|||||||||||||||||.||.||.|..||||||.||||.||.||||||||||||||||||||||.
Sbjct 817 TGGGTCCGCCAGATCTTCATTCACAAGCTCCCTCCATACCTGGGTCTGAAGAGGCCCAAACCCGAGAGAGACCA 890
Query 1107 GATGCCGGAGCCCCCTCACTGTTCTTCTCCAGGAAGTGGCTGGGGTCGGGGAACAGATGAATATTTCATCCGGA 1180
..|.||.||.||.|.|||||.|..|||||||.|||||||||||||..|.|||||.|||||||||||||||||||
Sbjct 891 ACTCCCTGAACCACATCACTCTCTTTCTCCAAGAAGTGGCTGGGGCAGAGGAACTGATGAATATTTCATCCGGA 964
Query 1181 AGCCGCCAAGTGATTTTCTCTTCCCCAAACCCAATAGGTTCCAGCCTGAACTGTCTGCCCCTGATCTGCGGCGA 1254
||||.||||||||||||||.|||||.||||..||.|||||.|||||||||...||||||||.||.|||||.|||
Sbjct 965 AGCCTCCAAGTGATTTTCTTTTCCCTAAACTTAACAGGTTTCAGCCTGAATCATCTGCCCCGGACCTGCGACGA 1038
Query 1255 TTTATCGATGGTCCAAACCGGGCTGTGGCCCTGCTTCCGGAGCTACGGGAGGTCGTCTCCTCTATCAGCTACAT 1328
||||||||||||||||.|||||||||.|..||||.||.|||||||||.||||||.|.|||||.|||||||||||
Sbjct 1039 TTTATCGATGGTCCAACCCGGGCTGTAGGTCTGCCTCAGGAGCTACGAGAGGTCATTTCCTCAATCAGCTACAT 1112
Query 1329 CGCTCGACAGCTGCAGGAACAGGAGGACCACGATGCGCTGAAGGAGGACTGGCAGTTTGTGGCCATGGTAGTGG 1402
.||.||||||||.||||||||||||||||||||.||.||||||||||||||||||||||||||||||||.||||
Sbjct 1113 GGCCCGACAGCTTCAGGAACAGGAGGACCACGACGCACTGAAGGAGGACTGGCAGTTTGTGGCCATGGTTGTGG 1186
Query 1403 ACCGCCTCTTCCTGTGGACTTTCATCATCTTCACCAGCGTTGGGACCCTAGTCATCTTCCTGGACGCCACGTAC 1476
||||.||.||.||||||||.||||||.|.|||||.|||||.||||||||||||||.|||||.||.|||||||||
Sbjct 1187 ACCGTCTTTTTCTGTGGACATTCATCGTTTTCACAAGCGTCGGGACCCTAGTCATTTTCCTAGATGCCACGTAC 1260
Query 1477 CACTTGCCCCCTCCAGACCCCTTTCCT 1503
||.|||||||||||.||.||.||.|||
Sbjct 1261 CATTTGCCCCCTCCTGAACCTTTCCCT 1287