Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_00560
• Subject: NM_004115.3
• Aligned Length: 831
• Identities: 639
• Gaps: 165

Alignment

Query   1  -----------------------------------------------------------ATGGTAAAACCGGTG  15
                                                                      .|||   .|||||  
Sbjct   1  ATGGCCGCGGCCATCGCTAGCGGCTTGATCCGCCAGAAGCGGCAGGCGCGGGAGCAGCACTGG---GACCGG--  69

Query  16  CCCCTCT----TCAGGAGAACTGATTTCAAATTATTATTATGCAACC---ACAAGGATCTCTTCTTTCTCAGGG  82
            ||.|||    .|||||| .|.||                 |||.||   .||||.|.|.|           ||
Sbjct  70  -CCGTCTGCCAGCAGGAG-GCGGA-----------------GCAGCCCCAGCAAGAACCGC-----------GG  113

Query  83  TGTCT--------AAGCTGCTGGATTGCTTTTCGCCCAAATCAATGTG-GTTTCTTTGGAACATTTTCAGCAAA  147
           ..|||        ||.|||.|||||..|||.||        |||.||| |..||||.||        |..||| 
Sbjct 114  GCTCTGCAACGGCAACCTGGTGGATATCTTCTC--------CAAAGTGCGCATCTTCGG--------CCTCAA-  170

Query 148  GGAACGCATATGCTGCAGTGTCTTTGTGGCAAGAGTCTTAAGAAAAACAAGAACCCAACTGATCCCCAGCTCAA  221
            ||| ||       ||||    .|||.|||                       .||||  ||||||||||||||
Sbjct 171  -GAA-GC-------GCAG----GTTGCGGC-----------------------GCCAA--GATCCCCAGCTCAA  206

Query 222  GGGTATAGTGACCAGGTTATATTGCAGGCAAGGCTACTACTTGCAAATGCACCCCGATGGAGCTCTCGATGGAA  295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 207  GGGTATAGTGACCAGGTTATATTGCAGGCAAGGCTACTACTTGCAAATGCACCCCGATGGAGCTCTCGATGGAA  280

Query 296  CCAAGGATGACAGCACTAATTCTACACTCTTCAACCTCATACCAGTGGGACTACGTGTTGTTGCCATCCAGGGA  369
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 281  CCAAGGATGACAGCACTAATTCTACACTCTTCAACCTCATACCAGTGGGACTACGTGTTGTTGCCATCCAGGGA  354

Query 370  GTGAAAACAGGGTTGTATATAGCCATGAATGGAGAAGGTTACCTCTACCCATCAGAACTTTTTACCCCTGAATG  443
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 355  GTGAAAACAGGGTTGTATATAGCCATGAATGGAGAAGGTTACCTCTACCCATCAGAACTTTTTACCCCTGAATG  428

Query 444  CAAGTTTAAAGAATCTGTTTTTGAAAATTATTATGTAATCTACTCATCCATGTTGTACAGACAACAGGAATCTG  517
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 429  CAAGTTTAAAGAATCTGTTTTTGAAAATTATTATGTAATCTACTCATCCATGTTGTACAGACAACAGGAATCTG  502

Query 518  GTAGAGCCTGGTTTTTGGGATTAAATAAGGAAGGGCAAGCTATGAAAGGGAACAGAGTAAAGAAAACCAAACCA  591
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 503  GTAGAGCCTGGTTTTTGGGATTAAATAAGGAAGGGCAAGCTATGAAAGGGAACAGAGTAAAGAAAACCAAACCA  576

Query 592  GCAGCTCATTTTCTACCCAAGCCATTGGAAGTTGCCATGTACCGAGAACCATCTTTGCATGATGTTGGGGAAAC  665
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 577  GCAGCTCATTTTCTACCCAAGCCATTGGAAGTTGCCATGTACCGAGAACCATCTTTGCATGATGTTGGGGAAAC  650

Query 666  GGTCCCGAAGCCTGGGGTGACGCCAAGTAAAAGCACAAGTGCGTCTGCAATAATGAATGGAGGCAAACCAGTCA  739
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651  GGTCCCGAAGCCTGGGGTGACGCCAAGTAAAAGCACAAGTGCGTCTGCAATAATGAATGGAGGCAAACCAGTCA  724

Query 740  ACAAGAGTAAGACAACA  756
           |||||||||||||||||
Sbjct 725  ACAAGAGTAAGACAACA  741