Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00651
Subject:
NM_001256414.2
Aligned Length:
1063
Identities:
727
Gaps:
158

Alignment

Query    1  ATGGGCTGCACGTTGAGCGCCGAAGACAAGGCGGCAGTGGAGCGAAGCAAGATGATCGACCGCAACTTACGGGA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  GGACGGGGAAAAAGCGGCCAAAGAAGTGAAGCTGCTGCTACTCGGTGCTGGAGAATCTGGTAAAAGCACCATTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGAAACAGATGAAAATCATTCATGAGGATGGCTATTCAGAGGATGAATGTAAACAATATAAAGTAGTTGTCTAC  222
                    ||||||||.||.|||||.|.|||.||||||||.||.||.|||||||||||.||||.|||.||||||
Sbjct    1  --------ATGAAAATTATCCATGAAGCTGGTTATTCAGAAGAGGAGTGTAAACAATACAAAGCAGTGGTCTAC  66

Query  223  AGCAATACTATACAGTCCATCATTGCAATCATAAGAGCCATGGGACGGCTAAAGATTGACTTTGGGGAAGCTGC  296
            ||.||.||.||.|||||.||.|||||.|||||.||.||.|||||..||.|.|||||.||||||||.||..|.||
Sbjct   67  AGTAACACCATCCAGTCAATTATTGCTATCATTAGGGCTATGGGGAGGTTGAAGATAGACTTTGGTGACTCAGC  140

Query  297  CAGGGCAGATGATGCCCGGCAATTATTTGTTTTAGCTGGCAG-TGCTGAAGAAGGAGTCATGACTCCAGAACTA  369
            |.||||.||||||||.||.|||.|.|||||..||||||| || ||||||||||||..|.||||||.|||||||.
Sbjct  141  CCGGGCGGATGATGCACGCCAACTCTTTGTGCTAGCTGG-AGCTGCTGAAGAAGGCTTTATGACTGCAGAACTT  213

Query  370  GCAGGAGTGATTAAACGGTTATGGCGAGATGGTGGGGTACAAGCTTGCTTCAGCAGATCCAGGGAATATCAGCT  443
            ||.|||||.||.||..|.||.|||..||||.||||.||||||||.||.||||.|||||||.|.||.||.|||||
Sbjct  214  GCTGGAGTTATAAAGAGATTGTGGAAAGATAGTGGTGTACAAGCCTGTTTCAACAGATCCCGAGAGTACCAGCT  287

Query  444  CAATGATTCTGCTTCATATTATCTAAATGATCTGGATAGAATATCCCAGTCTAACTACATTCCAACTCAGCAAG  517
            .|||||||||||..||||.|||.|.|||||..||||.||||||.|.||..|.||.|||||.||.|||||.||||
Sbjct  288  TAATGATTCTGCAGCATACTATTTGAATGACTTGGACAGAATAGCTCAACCAAATTACATCCCGACTCAACAAG  361

Query  518  ATGTTCTTCGGACGAGAGTGAAGACCACAGGCATTGTAGAAACACATTTCACCTTCAAAGACCTATACTTCAAG  591
            |||||||..|.||.||||||||.||.|||||.|||||.|||||.|||||.||.||||||||.||..|.||.||.
Sbjct  362  ATGTTCTCAGAACTAGAGTGAAAACTACAGGAATTGTTGAAACCCATTTTACTTTCAAAGATCTTCATTTTAAA  435

Query  592  ATGTTTGATGTAGGTGGCCAAAGATCAGAACGAAAAAAGTGGATTCACTGTTTTGAGGGAGTGACAGCAATTAT  665
            |||||||||||.||.||.||.|||||.||.||.||.|||||||||||.||.||.||.||||||||.||.||.||
Sbjct  436  ATGTTTGATGTGGGAGGTCAGAGATCTGAGCGGAAGAAGTGGATTCATTGCTTCGAAGGAGTGACGGCGATCAT  509

Query  666  CTTCTGTGTGGCCCTCAGTGATTATGACCTTGTTCTGGCTGAGGACGAGGAGATGAACCGAATGCATGAAAGCA  739
            |||||||||.||.||.|||||.||.|||||.|||||.|||||.||.||.||.||||||||||||||||||||||
Sbjct  510  CTTCTGTGTAGCACTGAGTGACTACGACCTGGTTCTAGCTGAAGATGAAGAAATGAACCGAATGCATGAAAGCA  583

Query  740  TGAAACTGTTTGACAGCATTTGTAATAACAAATGGTTTACAGAAACTTCAATCATTCTCTTCCTTAACAAGAAA  813
            |||||.|||||||||||||.|||||.|||||.|||||||||||.||.||.||.||.||.||.||.||||||||.
Sbjct  584  TGAAATTGTTTGACAGCATATGTAACAACAAGTGGTTTACAGATACATCCATTATACTTTTTCTAAACAAGAAG  657

Query  814  GACCTTTTTGAGGAAAAAATAAAGAGGAGTCCGTTAACTATCTGTTATCCAGAATACACAGGTTCCAATACATA  887
            ||.||.|||||.||||||||.||.|.|||.||..|.|||||.||.|||||||||||..||||.||.||.|||||
Sbjct  658  GATCTCTTTGAAGAAAAAATCAAAAAGAGCCCTCTCACTATATGCTATCCAGAATATGCAGGATCAAACACATA  731

Query  888  TGAAGAGGCAGCTGCCTATATTCAATGCCAGTTTGAAGATCTGAACAGAAGAAAAGATACCAAGGAGATCTATA  961
            |||||||||||||||.|||||||||||.|||||||||||.||.||.|.||||||.||.||.|||||.||.||.|
Sbjct  732  TGAAGAGGCAGCTGCATATATTCAATGTCAGTTTGAAGACCTCAATAAAAGAAAGGACACAAAGGAAATATACA  805

Query  962  CTCACTTCACCTGTGCCACAGACACGAAGAATGTGCAGTTTGTTTTTGATGCTGTTACAGATGTCATCATTAAA  1035
            |.||||||||.|||||||||||.||.|||||||||||||||||||||||||||||.||||||||||||||.|||
Sbjct  806  CCCACTTCACATGTGCCACAGATACTAAGAATGTGCAGTTTGTTTTTGATGCTGTAACAGATGTCATCATAAAA  879

Query 1036  AACAACTTAAAGGAATGTGGACTTTAT  1062
            ||.||..||||.||.|||||.||.|.|
Sbjct  880  AATAATCTAAAAGATTGTGGTCTCTTT  906