Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00880
Subject:
XM_017312580.1
Aligned Length:
1111
Identities:
931
Gaps:
65

Alignment

Query    1  ---------------------------------------------------------------ATGCCGGTGGA  11
                                                                           |||||||||||
Sbjct    1  ATGGCAGGGGAACTGAATATACTCAACTCCTGCCTAGGAAGAGGCTGCTGGGAAAAGGGTACCATGCCGGTGGA  74

Query   12  AAGGATGCGCATGCGCCCGTGGCTGGAGGAGCAGATAAACTCCAACACGATCCCGGGGCTCAAGTGGCTTAACA  85
            |.|||||||.|||||||||||||||||||||||||||||.|||||.|||||.||.|||||.||||||||.||||
Sbjct   75  ACGGATGCGAATGCGCCCGTGGCTGGAGGAGCAGATAAATTCCAATACGATACCAGGGCTAAAGTGGCTGAACA  148

Query   86  AGGAAAAGAAGATTTTTCAGATCCCCTGGATGCATGCGGCTAGACATGGGTGGGATGTGGAAAAAGATGCACCA  159
            ||||.|||||||||||.||||||||||||||||||||||||.|.||.||.|||||.||||||||.|||||.||.
Sbjct  149  AGGAGAAGAAGATTTTCCAGATCCCCTGGATGCATGCGGCTCGGCACGGATGGGACGTGGAAAAGGATGCTCCG  222

Query  160  CTCTTTAGAAACTGGGCAATCCATACAGGAAAGCATCAACCAGGAGTAGATAAACCTGATCCCAAAACATGGAA  233
            |||||.|||||||||||.|||||||||||||||||||||||||||.||||||||||.|||||.|||||||||||
Sbjct  223  CTCTTCAGAAACTGGGCGATCCATACAGGAAAGCATCAACCAGGAATAGATAAACCAGATCCAAAAACATGGAA  296

Query  234  GGCGAATTTCAGATGCGCCATGAATTCCTTGCCTGATATTGAAGAAGTCAAGGATAAAAGCATAAAGAAAGGAA  307
            .||.|||||..||||.||||||||||||.||||.||.|||||.|||||.|||||.|.|||||||||||||||||
Sbjct  297  AGCAAATTTTCGATGTGCCATGAATTCCCTGCCCGACATTGAGGAAGTGAAGGACAGAAGCATAAAGAAAGGAA  370

Query  308  ATAATGCCTTCAGGGTCTACCGAATGCTGCCCCTATCAGAACGGCCTTCTAAGAAAGGAAAGAAACCAAAGACA  381
            |.||.||||||||.||||||||.|||||||||.||||.|||||.|||||.||||||||||||||||||||||||
Sbjct  371  ACAACGCCTTCAGAGTCTACCGGATGCTGCCCTTATCCGAACGACCTTCCAAGAAAGGAAAGAAACCAAAGACA  444

Query  382  GAAAAAGAAGACAAAGTTAAGCACATCAAGCAAGAACCAGTTGAGTCATCTCTGGGGCTTAGTAATGGAGTAAG  455
            |||||||||||.|.|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct  445  GAAAAAGAAGAGAGAGTTAAGCACATCAAGCAAGAACCAGTTGAGTCATCTTTGGGGCTTAGTAATGGAGTAAG  518

Query  456  TGATCTTTCTCCTGAGTATGCGGTCCTGACTTCAACTATAAAAAATGAAGTGGATAGTACGGTGAACATCATAG  529
            ||...|||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  519  TGGCTTTTCTCCTGAGTATGCGGTCCTGACTTCAGCTATAAAAAATGAAGTGGATAGTACGGTGAACATCATAG  592

Query  530  TTGTAGGACAGTCCCATCTGGACAGCAACATTGAGAATCAAGAGATTGTCACCAATCCGCCAGACATTTGCCAA  603
            ||||||||||||||||||||||||||||||||||..||||||||||.|||||.||.|||||||||||.|||||.
Sbjct  593  TTGTAGGACAGTCCCATCTGGACAGCAACATTGAAGATCAAGAGATCGTCACTAACCCGCCAGACATCTGCCAG  666

Query  604  GTTGTAGAGGTGACCACTGAGAGCGACGAGCAGCCGGTCAGCATGAGCGAGCTCTACCCTCTGCAGATCTCCCC  677
            ||||||||.||||||||||||||.||.||.|||||.|||||||||||.||||||||||||||.|||||.||.||
Sbjct  667  GTTGTAGAAGTGACCACTGAGAGTGATGACCAGCCAGTCAGCATGAGTGAGCTCTACCCTCTACAGATTTCTCC  740

Query  678  CGTGTCTTCCTATGCAGAAAGCGAAACGACTGATAGTGTGCCCAGCGATGAAGAGAGTGCCGAGGGGCGGCCAC  751
            .|||||||||||.||||||||||||||.||.||.||||||.||||.||||||||||..||.||||||.|.||||
Sbjct  741  TGTGTCTTCCTACGCAGAAAGCGAAACTACCGACAGTGTGGCCAGTGATGAAGAGAACGCAGAGGGGAGACCAC  814

Query  752  ACTGGCGGAAGAGGAATATTGAAGGCAAACAGTACCTCAGCAACATGGGGACTCGAGGCTCCTACCTGCTGCCC  825
            |||||.|||||||||..||.||||||||.|||||||||||||||||||||||.||...|.||||.|||||||||
Sbjct  815  ACTGGAGGAAGAGGAGCATCGAAGGCAAGCAGTACCTCAGCAACATGGGGACACGGAACACCTATCTGCTGCCC  888

Query  826  GGCATGGCGTCCTTCGTCACTTCCAACAAACCGGACCTCCAGGTCACCATCAAAGAGGAGAGCAATCCGGTGCC  899
            .||||||||.||||.|||||.||||||||.||.||.||.||||||||||||||||||||.|||..||||.||||
Sbjct  889  AGCATGGCGACCTTTGTCACCTCCAACAAGCCAGATCTGCAGGTCACCATCAAAGAGGATAGCTGTCCGATGCC  962

Query  900  TTACAACAGCTCCTGGCCCCCTTTTCAAGACCTCCCCCTTTCTTCCTCCA-TGACCCCAGCATCCAGCAGCAGT  972
            |||||||||||||||||||||.|||..||||||.||||||.||.|| ||| |||||||..|..|||||||||||
Sbjct  963  TTACAACAGCTCCTGGCCCCCATTTACAGACCTTCCCCTTCCTGCC-CCAGTGACCCCCACGCCCAGCAGCAGT  1035

Query  973  CGGCCAGACCGGGAGACCCGGGCCAGCGTCATCAAGAAAACATCGGATATCACCCAGGCCCGCGTCAAGAGCTG  1046
            ||||||||||||||||||||||||||.|||||||||||.|||||.|||||||||||||||||.|||||||||||
Sbjct 1036  CGGCCAGACCGGGAGACCCGGGCCAGTGTCATCAAGAAGACATCTGATATCACCCAGGCCCGTGTCAAGAGCTG  1109

Query 1047  T  1047
            |
Sbjct 1110  T  1110

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