Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00901
Subject:
NR_103458.2
Aligned Length:
1578
Identities:
693
Gaps:
885

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGCAACCCGCTCGGGTCCTCTTCAACACTGTGGAAGCTTTGTTCTTTCGCTCTTTTGCAATAAATCTTGCTACT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCTCACTCTTTGGGTCCACACTGCCTTTATGAGCTGTAACACTCACCGCGAAAGGTCTGCAGCTTCACTCCTGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGCCAGCGAGCCCACGAGCCCACAGGGAGGAATGAACAACTCCAGATGCACCGCCTTAAGAGCTGTAACACTCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCAGGAACCCACCAGAAGGAAGAAACTCCGAACACA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCCGAACATCAGAAGGAACAAACTCCAGACGGCGCCACCTTAAGAGCTGTAACACTCACCGCCAGGGTCCGGGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTTCGTTCTTGAAGTCAGTGAGACCAAGAACCCACCAATTCCGGACGCAGTACCATGATCAACAGGATGTTACT  444

Query    1  ------------------ATGTGGTTGATATCAATAACTTTTCTCTCCATTGGTTATGGTGACATGGTACCTAA  56
                              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AGCAACTTCCTTGGAGCGATGTGGTTGATATCAATAACTTTTCTCTCCATTGGTTATGGTGACATGGTACCTAA  518

Query   57  CACATACTGTGGAAAAGGAGTCTGCTTACTTACTGGAATTATGGGTGCTGGTTGCACAGCCCTGGTGGTAGCTG  130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CACATACTGTGGAAAAGGAGTCTGCTTACTTACTGGAATTATGGGTGCTGGTTGCACAGCCCTGGTGGTAGCTG  592

Query  131  TAGTGGCAAGGAAGCTAGAACTTACCAAAGCAGAAAAACACGTGCACAATTTCATGATGGATACTCAGCTGACT  204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TAGTGGCAAGGAAGCTAGAACTTACCAAAGCAGAAAAACACGTGCACAATTTCATGATGGATACTCAGCTGACT  666

Query  205  AAAA----------------------------------------------------------------------  208
            ||||                                                                      
Sbjct  667  AAAAGAGGAAAGGAAGATCATGGAGACAACAATTGCAATACACGGTGGAGAACTCAACACCCCTTGATTAAAAA  740

Query  209  ------------------------------------GAGTAAAAAATGCAGCTGCCAATGTACTCAGGGAAACA  246
                                                ||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAAAAAATAGTTGAATAAAAAAGAAGTTTCCTGAAGGAGTAAAAAATGCAGCTGCCAATGTACTCAGGGAAACA  814

Query  247  TGGCTAATTTACAAAAATACAAAGCTAGTGAAAAAGATAGATCATGCAAAAGTAAGAAAACATCAACGAAAATT  320
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGGCTAATTTACAAAAATACAAAGCTAGTGAAAAAGATAGATCATGCAAAAGTAAGAAAACATCAACGAAAATT  888

Query  321  CCTGCAAGCTATTCATCAATTAAGAAGTGTAAAAATGGAGCAGAGGAAACTGAATGACCAAGCAAACACTTTGG  394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CCTGCAAGCTATTCATCAATTAAGAAGTGTAAAAATGGAGCAGAGGAAACTGAATGACCAAGCAAACACTTTGG  962

Query  395  TGGACTTGGCAAAGACCCAGAACATCATGTATGATATGATTTCTGACTTAAACGAAAGGAGTGAAGACTTCGAG  468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGGACTTGGCAAAGACCCAGAACATCATGTATGATATGATTTCTGACTTAAACGAAAGGAGTGAAGACTTCGAG  1036

Query  469  AAGAGGATTGTTACCCTGGAAACAAAACTAGAGACTTTGATTGGTAGCATCCACGCCCTCCCTGGGCTCATAAG  542
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AAGAGGATTGTTACCCTGGAAACAAAACTAGAGACTTTGATTGGTAGCATCCACGCCCTCCCTGGGCTCATAAG  1110

Query  543  CCAGACCATCAGGCAGCAGCAGAGAGATTTCATTGAGGCTCAGATGGAGAGCTACGACAAGCACGTCACTTACA  616
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCAGACCATCAGGCAGCAGCAGAGAGATTTCATTGAGGCTCAGATGGAGAGCTACGACAAGCACGTCACTTACA  1184

Query  617  ATGCTGAGCGGTCCCGGTCCTCGTCCAGGAGGCGGCGGTCCTCTTCCACAGCACCACCAACTTCATCAGAGAGT  690
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ATGCTGAGCGGTCCCGGTCCTCGTCCAGGAGGCGGCGGTCCTCTTCCACAGCACCACCAACTTCATCAGAGAGT  1258

Query  691  AGC-----------------------------------------------------------------------  693
            |||                                                                       
Sbjct 1259  AGCTAGAAGAGAATAAGTTAACCACAAAATAAGACTTTTTGCCATCATATGGTCAATATTTTAGCTTTTATTGT  1332

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 1333  AAAGCCCCTATGGTTCTAATCAGCGTTATCCGGGTTCTGATGTCAGAATCCTGGGAACCTGAACACTAAGTTTT  1406

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 1407  AGGCCAAAATGAGTGAAAACTCTTTTTTTTTCTTTCAGATGCACAGGGAATGCACCTATTATTGCTATATAGAT  1480

Query  694  --------------------------------------------------------------------------  693
                                                                                      
Sbjct 1481  TGTTCCTCCTGTAATTTCACTAACTTTTTATTCATGCACTTCAAACAAACTTTACTACTACATTATATGATATA  1554

Query  694  ------------------------  693
                                    
Sbjct 1555  TAATAAAAAAAGTTAATTTCTGCA  1578

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