Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_00903
• Subject: NM_008434.2
• Aligned Length: 2039
• Identities: 1397
• Gaps: 427

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGACACGGCCTCGTCCCCGCCCAGTGCTGAAAGGAAGCGCGCGGGTTGGAGCCGCCTGCTAGGCGCCCGGCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGCAGCGCGGTGGTCAAGAAGTGTCCCTTCTCACTGGAGCTGGCCGAAGGTGGCCCTGAGGGCAGCACGGTCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATGCGCCCATCGCGCCAACCGGAGCCCCCGGGCTCGCGCCCCCCATGTCGACCCCAGTGTCGCCCGCCCCGGCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCTGCAGACCTCGGCCCACGTCCGCGGGTGAGCCTTGACCCGCGGGTCTCCATCTACAGTGCGCGCCGCCCGCT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCTGGCGCGCACCCACATCCAGGGCCGAGTCTACAACTTCCTCGAGCGCCCCACGGGTTGGAAGTGTTTCGTGT  370

Query    1  --------ATGGACTTCCTCATCGTCCTGGTCTGCCTCATCTTCAGCGTGCTGTCCACCATCGAGCAGTATGCC  66
                    |..|.|||||||||.||.||||||||||||||||||||.||.||||||||.||.||||||||||||
Sbjct  371  ACCACTTCACCGTCTTCCTCATTGTTCTGGTCTGCCTCATCTTCAGTGTCCTGTCCACTATTGAGCAGTATGCC  444

Query   67  GCCCTGGCCACGGGGACTCTCTTCTGGATGGAGATCGTGCTGGTGGTGTTCTTCGGGACGGAGTACGTGGTCCG  140
            ||.||||||||.|||||.|||||||||||||||||.||.||.|||||||||||.|||||.||.||.||||||||
Sbjct  445  GCTCTGGCCACCGGGACCCTCTTCTGGATGGAGATTGTCCTTGTGGTGTTCTTTGGGACAGAATATGTGGTCCG  518

Query  141  CCTCTGGTCCGCCGGCTGCCGCAGCAAGTACGTGGGCCTCTGGGGGCGGCTGCGCTTTGCCCGGAAGCCCATTT  214
            |||||||||.||.||||||||||||||||||||||||.|||||||.|||||.||.|||||||||||||||||||
Sbjct  519  CCTCTGGTCTGCAGGCTGCCGCAGCAAGTACGTGGGCATCTGGGGCCGGCTACGTTTTGCCCGGAAGCCCATTT  592

Query  215  CCATCATCGACCTCATCGTGGTCGTGGCCTCCATGGTGGTCCTCTGCGTGGGCTCCAAGGGGCAGGTGTTTGCC  288
            |||||||.||||||||||||||.||.|||||.|||||.||||||||||||||.|||||.||.||.|||||.|||
Sbjct  593  CCATCATTGACCTCATCGTGGTTGTAGCCTCTATGGTTGTCCTCTGCGTGGGTTCCAAAGGACAAGTGTTCGCC  666

Query  289  ACGTCGGCCATCAGGGGCATCCGCTTCCTGCAGATCCTGAGGATGCTACACGTCGACCGCCAGGGAGGCACCTG  362
            ||.||.||.||||||||.|||||||||||.|||||||||.|||||||.||.|||||.||||||||.||.|||||
Sbjct  667  ACATCAGCTATCAGGGGTATCCGCTTCCTTCAGATCCTGCGGATGCTGCATGTCGATCGCCAGGGGGGTACCTG  740

Query  363  GAGGCTCCTGGGCTCCGTGGTCTTCATCCACCGCCAGGAGCTGATAACCACCCTGTACATCGGCTTCCTGGGCC  436
            |||||||||||||||.||.||||||||.|||||||||||||||||.||||||||||||||.|||||.|||||||
Sbjct  741  GAGGCTCCTGGGCTCTGTAGTCTTCATTCACCGCCAGGAGCTGATCACCACCCTGTACATTGGCTTTCTGGGCC  814

Query  437  TCATCTTCTCCTCGTACTTTGTGTACCTGGCTGAGAAGGACGCGGTGAACGAGTCAGGCCGCGTGGAGTTCGGC  510
            |.|||||||||||.||||||||.|||.||||||||||.||.||||||||||||||.||||||.|.|||||.|||
Sbjct  815  TTATCTTCTCCTCCTACTTTGTCTACTTGGCTGAGAAAGATGCGGTGAACGAGTCCGGCCGCATCGAGTTTGGC  888

Query  511  AGCTACGCAGATGCGCTGTGGTGGGGGGTGGTCACAGTCACCACCATCGGCTATGGGGACAAGGTGCCCCAGAC  584
            ||||||||||||||.||||||||||||||||||||||||||.|||||.|||||.|||||.|||||.||.|||||
Sbjct  889  AGCTACGCAGATGCTCTGTGGTGGGGGGTGGTCACAGTCACTACCATTGGCTACGGGGATAAGGTACCTCAGAC  962

Query  585  GTGGGTCGGGAAGACCATCGCCTCCTGCTTCTCTGTCTTTGCCATCTCCTTCTTTGCGCTCCCAGCGGGGATTC  658
            ||||||.||||||||||||||||||||.|||||||||||.|||||.|||||||||||.||||||||||||||.|
Sbjct  963  GTGGGTTGGGAAGACCATCGCCTCCTGTTTCTCTGTCTTCGCCATATCCTTCTTTGCACTCCCAGCGGGGATAC  1036

Query  659  TTGGCTCGGGGTTTGCCCTGAAGGTGCAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGATCCCGGCGGCA  732
            |||||||.|||||.||.||||||||.|||||||||||||||||||||||||||||||||||||||||.||.|||
Sbjct 1037  TTGGCTCTGGGTTCGCGCTGAAGGTCCAGCAGAAGCAGAGGCAGAAGCACTTCAACCGGCAGATCCCAGCTGCA  1110

Query  733  GCCTCACTCATTCAGACCGCATGGAGGTGCTATGCTGCCGAGAACCCCGACTCCTCCACCTGGAAGATCTACAT  806
            |||||||||||.|||||.|||||||||||||||||.||.||||||||.|||||..||||.|||||||||||..|
Sbjct 1111  GCCTCACTCATCCAGACTGCATGGAGGTGCTATGCCGCTGAGAACCCTGACTCAGCCACTTGGAAGATCTATGT  1184

Query  807  CCGGAAGGCCCCCCGGAGCCACACTCTGCTGTCACCCAGCCCCAAACCCAAGAAGTCTGTGGTGGTAAAGAAAA  880
            |||||||.|..|.|||||.|||||.||.|||||.||||||||||||||.||.||||||||..||||||||||.|
Sbjct 1185  CCGGAAGCCTGCTCGGAGTCACACGCTTCTGTCCCCCAGCCCCAAACCTAAAAAGTCTGTCATGGTAAAGAAGA  1258

Query  881  AAAAGTTCAAGCTGGACAAAGACAATGGGGTGACTCCTGGAGAGAAGATGCTCACAGTCCCCCATATCACGTGC  954
            |.||||||||||||||.||.||.||||||.|||.||||||||||||||||.|||..||.||.||.|||||.|..
Sbjct 1259  AGAAGTTCAAGCTGGATAAGGATAATGGGATGAGTCCTGGAGAGAAGATGTTCAATGTTCCTCACATCACTTAT  1332

Query  955  GACCCCCCAGAAGAGCGGCGGCTGGACCACTTCTCTGTCGACGGCTATGACAGTTCTGTAAGGAAGAGCCCAAC  1028
            ||.||||||||.||..||.|||..|||||.|||||..|.||.|||||||||||.||.||||||||||||||.||
Sbjct 1333  GATCCCCCAGAGGATAGGAGGCCAGACCATTTCTCCATTGATGGCTATGACAGCTCAGTAAGGAAGAGCCCTAC  1406

Query 1029  ACTGCTGGAAGTGAGCATGCCCCATTTCATGAGAACCAACAGCTTCGCCGAGGACCTGGACCTGGAAGGGGAGA  1102
            ||||||||||||.||||..|||||||||.|||||||.||||||||.||.|||||||||||||||||||||||||
Sbjct 1407  ACTGCTGGAAGTAAGCACACCCCATTTCTTGAGAACAAACAGCTTTGCAGAGGACCTGGACCTGGAAGGGGAGA  1480

Query 1103  CTCTGCTGACACCCATCACCCACATCTCACAGCTGCGGGAACACCATCGGGCCACCATTAAGGTCATTCGACGC  1176
            |.||||||||.|||||||||||..|.||||||||||||||.|||||||||||||||||.||||||||..|.|||
Sbjct 1481  CACTGCTGACCCCCATCACCCATGTGTCACAGCTGCGGGATCACCATCGGGCCACCATCAAGGTCATCAGGCGC  1554

Query 1177  ATGCAGTACTTTGTGGCCAAGAAGAAATTCCAGCAAGCGCGGAAGCCTTACGATGTGCGGGACGTCATTGAGCA  1250
            ||||||||||||||.|||||||||||||||||||||||.||||||||.|||||.|||||.||.|||||.|||||
Sbjct 1555  ATGCAGTACTTTGTAGCCAAGAAGAAATTCCAGCAAGCACGGAAGCCCTACGACGTGCGAGATGTCATCGAGCA  1628

Query 1251  GTACTCGCAGGGCCACCTCAACCTCATGGTGCGCATCAAGGAGCTGCAGAGGAGGCTGGACCAGTCCATTGGGA  1324
            ||||||.|||||||||||.|||||.|||||||||||.||.||.||.|||||.||||||||.|||||||||||||
Sbjct 1629  GTACTCCCAGGGCCACCTGAACCTTATGGTGCGCATTAAAGAACTACAGAGAAGGCTGGATCAGTCCATTGGGA  1702

Query 1325  AGCCCTCACTGTTCATCTCCGTCTCAGAAAAGAGCAAGGATCGCGGCAGCAACACGATCGGCGCCCGCCTGAAC  1398
            ||||.||..||||||||.||.||||||||||||||||.||.||.|||||.|||||.|||||.|||||.||||||
Sbjct 1703  AGCCATCTTTGTTCATCCCCATCTCAGAAAAGAGCAAAGACCGTGGCAGTAACACCATCGGTGCCCGTCTGAAC  1776

Query 1399  CGAGTAGAAGACAAGGTGACGCAGCTGGACCAGAGGCTGGCACTCATCACCGACATGCTTCACCAGCTGCTCTC  1472
            .|.||.||||||||||||||.||.|||||||||||.||||...|||||||.||||||||.|||||||||||.||
Sbjct 1777  AGGGTGGAAGACAAGGTGACACAACTGGACCAGAGACTGGTGATCATCACAGACATGCTCCACCAGCTGCTGTC  1850

Query 1473  CTTG---CACGGTGG--CAGCACCCCCGGCAGCGGCGGCCCCCCCAGAGAGGGCGGGGCCCACATCAC------  1535
            |.||   ||.|||||  ||  |||..|..||||                |||            ||||      
Sbjct 1851  CATGCAACAAGGTGGTCCA--ACCTGCAACAGC----------------AGG------------TCACAAGTTG  1894

Query 1536  ---CCAGCCCTGCGGCAGTGGCGGCTCCGTCGACCCTGAGCTCTTCCTGCCCAGCAACACCCTGCCCACCTACG  1606
               |||||..||     ..||.||||||.||.||||||||||||||||.||||||||||.||||||||||||||
Sbjct 1895  TAGCCAGCAATG-----AAGGTGGCTCCATCAACCCTGAGCTCTTCCTACCCAGCAACAGCCTGCCCACCTACG  1963

Query 1607  AGCAGCTGACCGTGCCCAGGAGGGGCCCCGATGAGGGGTCC  1647
            |.||.|||||.||||||..||..|||||.||||||||.|||
Sbjct 1964  AACAACTGACTGTGCCCCAGACAGGCCCTGATGAGGGTTCC  2004