Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_00978
Subject:
XR_943452.3
Aligned Length:
2189
Identities:
453
Gaps:
1736

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATCCGGTGCTGCAGTGAGGAGGTGGTTCTTGCCCGTGTTGTGTGTGTGTGTGAGTGAGAGAGCGAGTGAGTGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGAGTGAGTGTGTGTGTGGGGGGGACTCGGCTTGTTGTTGTCGGTGACTTCCCCCTCCCCTTCACCCCTTCCCC  148

Query    1  ------------------------------------------ATGAGCGATAACGATGACATCGAGGTGGAGAG  32
                                                      ||||||||||||||||||||||||||||||||
Sbjct  149  TCCCCGCCGCCGCTGCAGTGGCCGCTCCCTGGGCCGTAGGAAATGAGCGATAACGATGACATCGAGGTGGAGAG  222

Query   33  CGACGAAGAGCAACCGAGGTTTCAATCTGCGGCTGACAAACGGGCTCATCATAATGCACTGGAACGAAAACGTA  106
            ||||                           |||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CGAC---------------------------GCTGACAAACGGGCTCATCATAATGCACTGGAACGAAAACGTA  269

Query  107  GGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAGAAGGCATCCCGG  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  270  GGGACCACATCAAAGACAGCTTTCACAGTTTGCGGGACTCAGTCCCATCACTCCAAGGAGAGAAGGCATCCCGG  343

Query  181  GCCCAAATCCTAGACAAAGCCACAGAATATATCCAGTATATGCGAAGGAAAAACCACACACACCAGCAAGATAT  254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  344  GCCCAAATCCTAGACAAAGCCACAGAATATATCCAGTATATGCGAAGGAAAAACCACACACACCAGCAAGATAT  417

Query  255  TGACGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAGCAAG---------------------------------  295
            |||||||||||||||||||||||||||||||||||||||||                                 
Sbjct  418  TGACGACCTCAAGCGGCAGAATGCTCTTCTGGAGCAGCAAGGTGCTCTGCCTGCAGTAGGGATCACACCTGGCA  491

Query  296  --------------------------------------------------------------------------  295
                                                                                      
Sbjct  492  TCAGGTGTCTGAAAAGAGCTTTGAGGTCCTTGGAGTGGAATGTGCTGTGGGAAAGCGAGAGCTGATCAAGTTCT  565

Query  296  -----------------------------------------------------------TCCGTGCACTGGAGA  310
                                                                       |||||||||||||||
Sbjct  566  TTGTTCCTGGGGAATTCACTTCTCTTCCTCCCTCATGGAAGATGCAAGTAAAAGGAAATTCCGTGCACTGGAGA  639

Query  311  AGGCGAGGTCAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAACAGCCTCTACACCAACGCCAAGGGC  384
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  640  AGGCGAGGTCAAGTGCCCAACTGCAGACCAACTACCCCTCCTCAGACAACAGCCTCTACACCAACGCCAAGGGC  713

Query  385  AGCACCATCTCTGCCTTCGATGGGGGCTCGGACTCCAGCTCGGAGTCTGAGCCTGAAGAGCCCCAAAGCAGGAA  458
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  714  AGCACCATCTCTGCCTTCGATGGGGGCTCGGACTCCAGCTCGGAGTCTGAGCCTGAAGAGCCCCAAAGCAGGAA  787

Query  459  GAAGCTCCGGATGGAGGCCAGC----------------------------------------------------  480
            ||||||||||||||||||||||                                                    
Sbjct  788  GAAGCTCCGGATGGAGGCCAGCTAAGCCACTCGGGGCAGGCCAGCAATAAAAACTGTCTGTCTCCATCGTCTCA  861

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct  862  TCCTCCTTTCAGTTCGTTGGTAGAGCCCTCAGAACCATTTAAGAGACTCTTTATTTTTCTCTTTCTCCCTTTTT  935

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct  936  TTTTTAAATTTTTATTTTTACGTAGAAGCTCTTGGACAACAGCTCTCGTTCTCCTTCCCCATTTCCACTGTATA  1009

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1010  TTTTTTAATGTATTCCCTTCAGGGATTCCCTGTCCCCAACAGGAATTTTTAAACCAAAACACCCCAACTTGGCA  1083

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1084  GCTTTTTCTGTGGAGGACAGACGGCCGGCCGGACCTCTGAGCACATAGTGTCCTGCCCACCCTACCAGCTCCTC  1157

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1158  CAGCCCTGCCGGGCACATGCCCGGGGGACGCCTGCCCTGCCCAGGTGGCCTCCTGGCCCGCCCTCACCTCTGAT  1231

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1232  AGACTTTGTGAATCTGAACTGCTCTACTTTGAGAAGATGACCGGTTTGGAGTAATCAGAATGAACCCTCCTCCT  1305

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1306  TTTTAAGGGTTTTTTTTTTTTCCTTTTTCTAAAAAGCTATGTATCGCTCCTATTGAAAGACCAGATCCTTAGAG  1379

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1380  AAGTTTGTGGTATAAAAAGGAAGTGGGGACAGATTCGCAGCACAGAGTCGCTGGCATGTTTCACTCCTGCTTCT  1453

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1454  CTCAGCCAGCTGTTTAAGCCTGCGGCGCCAGCCTCACGGAGGGCCGTGTGACACTCTCGTGGTATGTATGGGAG  1527

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1528  ATGGCAGCAGTGAAGCAGCAGCCACCAGGGAGTGGCCATTTGGGGTTGGGACAGGGAGGGTGTTTTGGGTGGCA  1601

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1602  TAGAGGTTTTGTATTGAGGGCCAGTGATGATGTTTTGATATTTATTTCCTGCTACTTAAATTTGAATCTGAGTG  1675

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1676  AATTGTACCTATTTCTGATGATGTCGGTCTTGCAAAGCGACAGATTCATAAAGTAATGATGAAATCTTTCTTTC  1749

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1750  TTCCCGTGTGTATTTCTAAGAAATAGAGCCAACTGATTTTGTATGTAAATACCAAGAGCAATTTACCTGGTACT  1823

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1824  AAACCCGCACCCCAGTGCGGACCCTTCCCAGCCCTCATCCCACTTCCTTTCCTACTGTCCTGGAACCTGTCTCC  1897

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1898  ATTGTGTGATCCAGCCCTGGTTCTGGCTGTGGTCAGCAGATGCCAGTGAAGGGTTTTGTGTGTTTAGGCCTCAT  1971

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 1972  TTCTTTGTCTTTTTCCTACTCCGTTCCTGGCATTTGCTGATTTCTAGTGTATACTCTGTAGTCTCAGTTCGTGT  2045

Query  481  --------------------------------------------------------------------------  480
                                                                                      
Sbjct 2046  TTGATTCCATTCCATGGAAATAAAAAGTATGTTGTACATACTGCCGAAGAATTGTCTTGCAAGTTAAGGCTTCC  2119

Query  481  -------------------------------------------  480
                                                       
Sbjct 2120  CCCTTTACTATAAGACTATAAATAAAAACTTATTTTATCCTTC  2162

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