Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_00998
- Subject:
- XR_001751290.2
- Aligned Length:
- 3112
- Identities:
- 1333
- Gaps:
- 1779
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ACATGTGGGCTGCTGACGGGCCGCTCGTAACCTTCAGTTCGGGGGCTTGACAATTTTTTTCTTCTTTTTCTTCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTTCTTTTCTTTCTTTTTTTTTCCAACTGAGGGGAAGAGAAGAGAAAGAGGGGGAAAGGAGGACCGAAGAGGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAGGAGGGGAGGGGGGAGGAGGAGGAGGTGGAGGAGGAGGAGGAAGATCAGGAGGAGGAGGAAGAAGAGGAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAGAGAAAAAGAAGAAATATCACAGAAAAAAAAATTCTTCGTTGTCTAGACTGGGCTTTTTTTCCCCCCTAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAATAGCATATTGGAGAATTGGGAGAAGTCTCTTTGGTTTGGAAAAAAAAAAAAGGAATCTTCAGCCTAGATCA 370
Query 1 -----------------------------------------------------------------ATGGCGCAA 9
|||||||||
Sbjct 371 CTTTCTTATCCGGACTGGGATATTAAATATACGACACATCCAGGAGTTTATTGGAGCGCAGACTGATGGCGCAA 444
Query 10 AGGTACGATGAGCTGCCCCATTACGGCGGGATGGACGGAGTAGGGGTTCCCGCTTCCATGTACGGAGACCCTCA 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGGTACGATGAGCTGCCCCATTACGGCGGGATGGACGGAGTAGGGGTTCCCGCTTCCATGTACGGAGACCCTCA 518
Query 84 CGCGCCGCGGCCGATCCCCCCGGTTCACCACCTGAACCACGGGCCGCCGCTCCACGCCACACAGCACTACGGCG 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CGCGCCGCGGCCGATCCCCCCGGTTCACCACCTGAACCACGGGCCGCCGCTCCACGCCACACAGCACTACGGCG 592
Query 158 CGCACGCCCCGCACCCCAATGTCATGCCGGCCAGTATGGGATCCGCTGTCAACGACGCCTTGAAGCGGGACAAG 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 CGCACGCCCCGCACCCCAATGTCATGCCGGCCAGTATGGGATCCGCTGTCAACGACGCCTTGAAGCGGGACAAG 666
Query 232 GACGCGATCTATGGGCACCCGTTGTTTCCTCTGTTAGCTCTGGTCTTTGAGAAGTGCGAGCTGGCGACCTGCAC 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GACGCGATCTATGGGCACCCGTTGTTTCCTCTGTTAGCTCTGGTCTTTGAGAAGTGCGAGCTGGCGACCTGCAC 740
Query 306 TCCCCGGGAACCTGGAGTGGCTGGCGGAGACGTCTGCTCCTCCGACTCCTTCAACGAGGACATCGCGGTCTTCG 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCCCCGGGAACCTGGAGTGGCTGGCGGAGACGTCTGCTCCTCCGACTCCTTCAACGAGGACATCGCGGTCTTCG 814
Query 380 CCAAGCAGGTTCGCGCCGAAAAGCCACTTTTTTCCTCAAATCCAGAGCTGGACAATTTGATGATACAAGCAATA 453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CCAAGCAGGTTCGCGCCGAAAAGCCACTTTTTTCCTCAAATCCAGAGCTGGACAATTTGATGATACAAGCAATA 888
Query 454 CAAGTACTAAGGTTTCATCTTTTGGAGTTAGAAAAGGTCCACGAACTGTGCGATAACTTCTGCCACCGATACAT 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CAAGTACTAAGGTTTCATCTTTTGGAGTTAGAAAAGGTCCACGAACTGTGCGATAACTTCTGCCACCGATACAT 962
Query 528 TAGCTGTTTGAAGGGGAAAATGCCCATCGACCTCGTCATTGATGAAAGAGACGGCAGCTCCAAGTCAGATCATG 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TAGCTGTTTGAAGGGGAAAATGCCCATCGACCTCGTCATTGATGAAAGAGACGGCAGCTCCAAGTCAGATCATG 1036
Query 602 AAGAACTTTCAGGCTCCTCCACAAATCTCGCTGACCATAACCCTTCTTCTTGGCGAGACCACGATGATGCAACC 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AAGAACTTTCAGGCTCCTCCACAAATCTCGCTGACCATAACCCTTCTTCTTGGCGAGACCACGATGATGCAACC 1110
Query 676 TCAACCCACTCAGCAGGCACCCCAGGGCCCTCCAGTGGGGGCCATGCTTCCCAGAGCGGAGACAACAGCAGTGA 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TCAACCCACTCAGCAGGCACCCCAGGGCCCTCCAGTGGGGGCCATGCTTCCCAGAGCGGAGACAACAGCAGTGA 1184
Query 750 GCAAGGGGATGGTTTAGACAACAGTGTAGCTTCACCTGGTACAGGTGACGATGATGATCCGGATAAGGACAAAA 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCAAGGGGATGGTTTAGACAACAGTGTAGCTTCACCTGGTACAGGTGACGATGATGATCCGGATAAGGACAAAA 1258
Query 824 AACGCCAGAAGAAAAGAGGCATTTTCCCCAAAGTAGCAACAAATATCATGAGAGCATGGCTCTTCCAGCATCTC 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AACGCCAGAAGAAAAGAGGCATTTTCCCCAAAGTAGCAACAAATATCATGAGAGCATGGCTCTTCCAGCATCTC 1332
Query 898 ACACATCCGTACCCTTCCGAAGAGCAGAAGAAACAGTTAGCGCAAGACACAGGACTTACAATTCTCCAAGTAAA 971
|||
Sbjct 1333 ACA----------------------------------------------------------------------- 1335
Query 972 CAACTGGTTTATTAATGCCAGAAGAAGAATAGTACAGCCCATGATTGACCAGTCAAATCGAG------------ 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1336 ------GTTTATTAATGCCAGAAGAAGAATAGTACAGCCCATGATTGACCAGTCAAATCGAGCAGGTTTTCTTC 1403
Query 1034 ---------CAGTGAGCCAAGGAGCAGCATATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGTTGGATGGT 1098
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 TTGATCCTTCAGTGAGCCAAGGAGCAGCATATAGTCCAGAGGGTCAGCCCATGGGGAGCTTTGTGTTGGATGGT 1477
Query 1099 CAGCAACACATGGGGATCCGGCCTGCAG---------------------------------------------- 1126
||||||||||||||||||||||||||||
Sbjct 1478 CAGCAACACATGGGGATCCGGCCTGCAGGACCTATGAGTGGAATGGGCATGAATATGGGCATGGATGGGCAATG 1551
Query 1127 --------------------------------------------------GTTTGCAGAGCATGCCAGGGGACT 1150
||||||||||||||||||||||||
Sbjct 1552 GCACTACATGTAACCTTCATCATGTAAAGCAATCGCAAAGCAAGGGGGAAGTTTGCAGAGCATGCCAGGGGACT 1625
Query 1151 ACGTTTCTCAGGGTGGTCCTATGGGAATGAGTATGGCACAGCCAAGTTACACTCCTCCCCAGATGACCCCACAC 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 ACGTTTCTCAGGGTGGTCCTATGGGAATGAGTATGGCACAGCCAAGTTACACTCCTCCCCAGATGACCCCACAC 1699
Query 1225 CCTACTCAATTAAGACATGGACCCCCAATGCATTCATATTTGCCAAGCCATCCCCACCACCCAGCCATGATGAT 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1700 CCTACTCAATTAAGACATGGACCCCCAATGCATTCATATTTGCCAAGCCATCCCCACCACCCAGCCATGATGAT 1773
Query 1299 GCACGGAGGACCCCCTACCCACCCTGGAATGACTATGTCAGCACAGAGCCCCACAATGTTAAATTCTGTAGATC 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1774 GCACGGAGGACCCCCTACCCACCCTGGAATGACTATGTCAGCACAGAGCCCCACAATGTTAAATTCTGTAGATC 1847
Query 1373 CCAATGTTGGCGGACAGGTTATGGACATTCATGCCCAA------------------------------------ 1410
||||||||||||||||||||||||||||||||||||||
Sbjct 1848 CCAATGTTGGCGGACAGGTTATGGACATTCATGCCCAATAGTATAAGGGAACTCAAGGGAAAAGGAAACACACG 1921
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1922 CAAAAACTATTTTAAGACTTTCTGAACTTTGACCAGATGTTGACACTTAATATGAAATTCCAGACAGCTGTGAT 1995
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 1996 TATTTTTTACTTTTGTCATTTTTCATCAAGCAACAGAGGACCAATGCAACAAGAACACAAATGTGAAATCATGG 2069
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2070 GCTGACTGAGACAATTCTGTCCATGTAAAGATCCTCTGGAAAAAGACTCCGAGAGTTATAACTACTGTAGTATA 2143
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2144 AATATAGGAACTAAGTTAAACTTGTACATTTCTGTTGATCACGCCGTTATGTTGCCTCAAATAGTTTTAGAAGA 2217
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2218 GAAAAAAAAATATATCCTTGTTTTCCACACTATGTGTGTTGTTCCCAAAAGAATGACTGTTTTGGTTCATCAGT 2291
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2292 GAATTCACCATCCAGGAGAGACTGTGGTATATATTTTAAACCTGTTGGGCCAATGAGAAAAGAACCACACTGGA 2365
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2366 GATCATGATGAACTTTTGGCTGAACCTCATCACTCGAACTCCAGCTTCAAGAATGTGTTTTCATGCCCGGCCTT 2439
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2440 TGTTCCTCCATAAATGTGTCCTTTAGTTTCAAACAGATCTTTATAGTTCGTGCTTCATAAGCCAATTCTTATTA 2513
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2514 TTATTTTTGGGGGACTCTTCTTCAAAGAGCTTGCCAATGAAGATTTAAAGACAGAGCAGGAGCTTCTTCCAGGA 2587
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2588 GTTCTGAGCCTTGGTTGTGGACAAAACAATCTTAAGTTGGGCAGCTTTCCTCAACACAAAAAAAAGTTATTAAT 2661
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2662 GGTCATTGAACCATAACTAGGACTTTATCAGAAACTCAAAGCTTGGGGGATAAAAAGGAGCAAGAGAATACTGT 2735
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2736 AACAAACTTCGTACAGAGTTCGGTCTATTAATTGTTTCATGTTAGATATTCTATGTGTTTACCTCAATTGAAAA 2809
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2810 AAAAAAGAATGTTTTTGCTAGTATCAGATCTGCTGTGGAATTGGTATTGTATGTCCATGAATTCTTCTTTTCTC 2883
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2884 AGCACGTGTTCCTCACTAGAAGAAAATGCTGTTACCTTTAAGCTTTGTCAAATTTACATTAAAATACTTGTATG 2957
Query 1411 -------------------------------------------------------------------------- 1410
Sbjct 2958 AGGACTGTGACGTTATGTTAAAAAAAAAAAGGTGTTAAGTCACAAAAAGCGGTAATAAATATTTCATTTTTGAT 3031
Query 1411 ---- 1410
Sbjct 3032 TTTT 3035
