Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01027
- Subject:
- NR_103504.2
- Aligned Length:
- 6071
- Identities:
- 227
- Gaps:
- 5840
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAACCCTCAGGGACCTGGTATAGACGCAGAATCTGTTTCACACAACAACTGCTATTTGAAGGAAAAAAAAAAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAAGCAAATGATACCAAGACAAGCTCATAACAGAGATCCAATCAGCAGATGTGTACGGATGAAAATACAGTGA 148
Query 1 -ATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACACTTCAGCATAC 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACACTTCAGCATAC 222
Query 74 ACTGCTGCCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGATAGTGGATCGGAAATACAGCATCTGTAAGAGC 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACTGCTGCCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGATAGTGGATCGGAAATACAGCATCTGTAAGAGC 296
Query 148 GGCTGCTTCTACCAGAAGAAAGAGGAGGACTGGATCTGCTGCGCCTGCCAGAAGACCAGATTGAAAAGGAAGAT 221
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |.
Sbjct 297 GGCTGCTTCTACCAGAAGAAAGAGGAGGACTGGATCTGCTGCGCCTGCCAGAAGACCAGA------------AC 358
Query 222 CAG-------GCCAA--CCCCAAAGAAG---AAG---------------------------------------- 243
||| ||||| ||||..|||.| |||
Sbjct 359 CAGCCGCCGTGCCAAGTCCCCTCAGAGGCCCAAGCAACAGCCAGCTGCGCCCCCCGCGGTGGTCAGAGCGCCAG 432
Query 244 -------------------------------------------------------------------------- 243
Sbjct 433 CCAAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGGTCC 506
Query 244 -------------------------------------------------------------------------- 243
Sbjct 507 CCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGTCCCCGCCCAGAGGTCCG 580
Query 244 -------------------------------------------------------------------------- 243
Sbjct 581 ACCACCGCCAGCCAAGCAGCGTCCCCCTCAGAAGTCCAAGCAACAGCCGCGCAGCAGCCCCCTCAGAGGGCCAG 654
Query 244 -------------------------------------------------------------------------- 243
Sbjct 655 GCGCCAGCCGTGGGGGGTCCCCCGTCAAAGCTTCTAGGTTCTGATTGAAAAGGAAGATCAGGCCAACCCCAAAG 728
Query 244 -------------------------------------------------------------------------- 243
Sbjct 729 AAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAACAACCTCGGCTCCTGGACTCATTGCTTCACAACCCATCT 802
Query 244 -------------------------------------------------------------------------- 243
Sbjct 803 ACCCCTGGATGAAGTTATCTGGCTTCAAATATTATGCAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGC 876
Query 244 -------------------------------------------------------------------------- 243
Sbjct 877 TCATGGTCCCCATGGCATGGGGGCCTCAGGGCAGCCTGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTC 950
Query 244 -------------------------------------------------------------------------- 243
Sbjct 951 TGACCTCTATAATTGCCACTGAGAGATCTGCTGTCAGTCTGCTTATCCTTCCACGGACTCAAGTTTCTTCAATC 1024
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1025 TGAAGATACATGTCTTTCTCCAGGGACATGTGGAAAAAAAAAAGATGTTATACAACCATCAAAGTGGCAAAAAT 1098
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1099 AAAAAAAATCAAGTATTGGCAAAGATGTGGGGAAAATTCTCATAAGCTACTGATGAGAATTTATAAATTATTAT 1172
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1173 GACACCTTTGGGTTGCAATCTGGGGATACTGGCAAAGCAGAAAATTGTACAACCTGTGATCAAGCAATAATAAT 1246
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1247 TTTAGGCACCCATCCTAGAGAAAACTTGAATTCATAGAAAAAGTAGGTACACGTAAATCTGTTCAAGGAATCAT 1320
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1321 TGTTTGGCATTGAAAATAGGAGAGAGATCATGAGAAATTACCAAAATGTCCACCAATAGAATGAGTGAATCACC 1394
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1395 TGTGGTATATTTATAAATAAAAATATTAAATAGAAGGTAAAACAAATCAGACATACACACATTAGATAGATAAA 1468
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1469 TTTAGAGGACAAAATAAGGAACATGAAAAGCAAATAGTAGATGGCAAATGTAATATAATATACTATGCATAAAT 1542
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1543 TTTAACAACACACAATATTATATTGCATATTGCCCAATAAGCAGAAGCCATAAGGTCTCACACTTTTCTTATAA 1616
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1617 TGCAATAGAATAAAAATGACAACAAAGTAAAAGGGTATCCCAAAAATAAAACTATCCTTTTGGAAAAAAAAAGA 1690
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1691 TTTAAAATAATTCCTGGTTTGAAGAAATAACAAATTAAAAGCTATATATAAACGGTTAACAATATTAGGTGGAC 1764
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1765 ATATTTGTTTGAAGAGATAGGTGAAAGATAGTTGAAAAGCCTGGGGGTATATTCAAGGTTATATGTCTTAGAAA 1838
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1839 ACAAAAATACTTGTTTGGGTTCAGTTTTGGATCTGGGCTTGTTCTTGTGGCTTCTGATGATTTCTGACTTGGGG 1912
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1913 AAAAATGGGGAAGAGTTGAAATACGTCCTTCCACCCAAACCTTTGTTTAGTAATAGGTAGGAAAATGAAGAAGA 1986
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1987 AAATAGAATGTTGCAGAATGTGGAGGGATGTAAAATGGACAGTACTAGGGTAGAGGGGAAGTCAGATTAGAGGA 2060
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2061 AAGAAAGAGCATCAGGAACAGTCTTGTGCTAGGAGCTGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAA 2134
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2135 CAAGGCCATGGCTCTGTGTCCTTGAGTGGGCACAACCATTCCTAGCCAAGTTTAAGAGGCAAGTAAAAATATAG 2208
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2209 GGGCAATGTCAGATGAAGTCTTGTTCAGGGTATGGGGCTAGGATGAGAGAGAATGCCACAGAGTATGAAGGAAG 2282
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2283 AGTGATAGATCCAGATGAGATACAGCTCAGAGTGCCACGCCCCCAGAAAGAGGAATCAGGCAAGTACTGTCCCA 2356
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2357 AGGCAGCTGGAGGGTGAGGGCTGAGTGCCCTGGCTTCCTCACTTGGGGAGACCATGGGTCTCTGTAGAAATTCC 2430
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2431 AATATAAAGGCAGGGAAATTTGACTGCATGGAGTCTTCAGGTAGAAATGTTTCTCTTGCCTAAATTCAGGTGCT 2504
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2505 AAATAAACAACAAAATGGTAACCTCTACTATGAAGTGTTTCCAATGATGGGATATCTGAGGCCATTACATTCCT 2578
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2579 GGGAATAACATGGTGAGGTGCAGGGTGGTGGTGGTGGTGAAACATACGACAGACCACTGTAAGTGAGAACAAAT 2652
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2653 TACTGGCCCAGCCCAACCCACACCAAATAAGAAATTTAATATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCC 2726
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2727 AGGCCCATAGTGCTTGCTGGGCTCTCTCTTCCACATCATCCAGAAGACACACATTTGCTATGGAATGATTGTGG 2800
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2801 AGGTGAGAGTATAGTGCATATTAATTCATGCAAAAAGTTAGATATTAGCCCAGAAATGTTAGTAACAAGAAACT 2874
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2875 ACTGAATTCTCTGTTTGTCTGTTGTGGAAATAAAACCTTCTGGGGATGAATCAAAACTATCTGACAATTACTTG 2948
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2949 AAATGGGTGAATAGCTAAATGTAATGTGCCTTGGATATTATAACTAAAAGGTGCTATAATCCAGTTATATTTTT 3022
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3023 TATCTTTTAAGGATTGGTTCTGAGGAGCACTACCAGTAAATATTGCAAAAATTACATAAAGCTCCAAAAGCTAC 3096
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3097 TCTGTGTAAACTTCTTGAGTGGGAATTCTCAACCATAATATCTGGAATATGACTGATAATTCTGGATGTTAACT 3170
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3171 GATTTTATGTTCTGATGTTTTGACTGGTTTTGGGAAAAATTTTGGGAAAAAAGAGTTTTCCTCGTAAATACCCA 3244
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3245 ACAACTGGGTCTCTGGGTAAAAAGGCCTAATTTATAGAGATTGCTAATTTCCATGGTGTAAATATTTCCACAAT 3318
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3319 GCAGATTCCTTCCTTCCTTTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCACTCTTGTTACCCAGACTGGAGTG 3392
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3393 CAAAGGTGCGACCTTGGCTCACTGCAATCTTCACCTCCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCAAG 3466
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3467 TAGCTGGGATTACAGGTGCCCACGACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATAGGGATTCACCATG 3540
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3541 TTGGCCAGGCTGGTCTCAACCTCTGGACCTCAGGTGATCCACCCGCCTCGGCCTCCTAAAGTGCTGGAGATTAC 3614
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3615 AGGCATGAGCCACCACGCCCGGACCATGATGCAGATTTCAAGCTATGAACATGATTCTCTGGAGTTTACCATTT 3688
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3689 GTCTTTTAATTGGCAAATTTGATGCAGAATTGGGAAGAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGC 3762
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3763 TGGTGCCAGTGCACCACTGTATATATCCATGGCCCTCTGTGAAGCTAGAGTTTACTACTAAAATTTGTGCTCCA 3836
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3837 TAAATATACAAAGGCACTAGTAAGAGAAAAAATATAAAGAGAATATAAACTAAATTCAAATTAGGGAGCTCAAA 3910
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3911 TGGAGAAAATTGACAGATAATATTTTTGAAACTTTGAAAAGTAGTATTTGTCTAGATTCACCTTTTATTACCTT 3984
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3985 TTCCTTTTTTTCTTTTCCTTTTTTTTTTTTTTTTGAGACGGAGTTTCTCTCTTGTTACCCAGGCTGGAGTGCAA 4058
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4059 TGGCACGCAATCTCAGCTCATTGCAACCTCGGCTCACTGTAACCTTCACCTTCCGTGTTCAAATGATTCTCCTG 4132
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4133 CCTCAGCCTTCCGAGTAGCTGGGATTACAGGCACCCACCACCATGCCCAGCTAATTCTTTGTATTTTTAGTGGA 4206
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4207 GATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACCCCTGACCTCAGGTGATCCACCCACCTGGGCCTCCC 4280
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4281 AAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCCGGCCTGTTATTATCTTTTATTAAGCAAACAGCGTATCT 4354
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4355 ATGTATCATACTGAGTGTTCTGAGCTGTTAGTTTCTTTGGTGTTCATCTAGATGGAAGCTGGGGCTTCCTTCCT 4428
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4429 TTCAGATATTGGTGCTAACATGAAGCTGACCAAAGAATTGATGGGATCTGCACACTGTAAAGCCGGTTTCAGGA 4502
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4503 TGGCTGAGCTGACGGTCAAGAAAGAAGAGAAGATATGAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTA 4576
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4577 GACTTGTGATTTGGTATGACAATATATGGCTTTTTGTGATTGTTAACATTAATGAAAACAAGAAAAATTAGTTG 4650
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4651 CTCAAAAGTTGAAAAATGGATTCATAAACTTTTTATTAGAGTAAGGCAAAAGAACATATTAAAATAGAGGTAAA 4724
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4725 TTAGAAATGTCAATAAGAACCCATGGACATTTTTTATAAGGAGACTTTATCTGTTCTGTCCCTACAGTGATTTA 4798
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4799 TGCTCTTGGATATTTTTGCTGTCATCCTGACAAATTCTAGTTGGAATATGGAACAAGCTTATTTGTAGACCTAG 4872
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4873 TGCCTGTGGCTTCTAAAGCAATTTTCTGAAAAGAGAAACCACTGCCTGTTGGAAGAATAGTTGATTCCATACCT 4946
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4947 CAAGCTAGGGAAAAAAAATCAGAATTAGTCTGTGAATTCTAGATGTTGAGAGAAAGCAGGGTTTCATTAGGGCA 5020
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5021 TCGGAGAGTCACAAGTCCATAGGATGCAAAAAGGAAGATGAAATAAAATTGCCTGAAAAACGCACCTGAATTTC 5094
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5095 TGGCATTGTTTACTGAAAAGGCTGTGTATTGATGAACCCCAATTATGTGAGGTCTACATTTAAGAGTTTATAAT 5168
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5169 CAACAGTTTGAAAATGCAGGGTGTTGTTTCTTTCTATAAGGAGACAAAACAGTCAGAAGGGAGTGTCACAGGAC 5242
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5243 ATTATCACAAAATCAAAGTTCTCCATGAAATGTGGTTCATTTGCTAGAAAATAATGCAAGCCTATTGGAGAGAA 5316
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5317 TCAGGGCTTCTAGTGATGCTAGGGATGACCTTAAGCATTGTTTGTAAATCACACTTTTTCCTAGTCTTTCAGCA 5390
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5391 GCAGCTGCACAGAGTAGGCCTGCTTCTTCCCATGAAAGCCACACTGAGTTTTATCAACTAGTAGTGTGTGGGCA 5464
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5465 CTATTGCAAGTTATGTTGTGTTGTTTATGGCCATTTATCCAACAGTGCTTTCCTCTGTGCGGGGCTCTGCAGCC 5538
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5539 TCGTTCTATGTTATTTTTATTACCACGTGTCTGTGCGCCTCAGGTGGCAAAGCAGAATCAGCTTCTCTACCCTC 5612
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5613 AGCAGGGCTCACTATGACTCACTATAAGGGAAGAAAATCTTACAGATGTCAGAAAATGTTAGGTAAGTGGACAG 5686
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5687 TGATAAACACAAAACAGCAAGTGGTCAGTATCAAAGAGAAAAACAGTATGTTGGTGAAGGAGAAGTATCAAAGC 5760
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5761 TAGTTAAAAAAGTAACAGGAGAAATGTAAAGGGACAATACTCCACAAAAATTTAGATTGTAACTGAGCTTCTTC 5834
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5835 TCCTAAAGAGATTTAAAAATAAAGTATAGGAAATACATGAAGAAACAAAGTAAAATGCCAAGGTGTAAGTTTGA 5908
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5909 CCATGAATATCTAGGGAAAAACATACTTGCACTAAAACAACCAAATATGCAAAAATCAAGTGGAAAAACAGGTC 5982
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5983 AAAATAATGCCAGTTGATGTCTGTAAGAACTAAATGTATAATAAAATGAGCAAAAAAAATGGCCAGTTTAACAC 6056
Query 244 --- 243
Sbjct 6057 CAA 6059
