Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01027
- Subject:
- NR_103505.2
- Aligned Length:
- 6109
- Identities:
- 227
- Gaps:
- 5878
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAACCCTCAGGGACCTGGTATAGACGCAGAATCTGTTTCACACAACAACTGCTATTTGAAGGAAAAAAAAAAAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAAGCAAATGATACCAAGACAAGCTCATAACAGAGATCCAATCAGCAGATGTGTACGGATGAAAATACAGTGA 148
Query 1 -ATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACACTTCAGCATAC 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GATGAGTCAGAAACCGGCCAAGGAGGGTCCCAGACTCTCCAAAAACCAGAAGTACTCCGAACACTTCAGCATAC 222
Query 74 ACTGCTGCCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGATAGTGGATCGGAAATACAGCATCTGTAAGAGC 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACTGCTGCCCGCCGTTCACCTTCCTCAATTCCAAGAAGGAGATAGTGGATCGGAAATACAGCATCTGTAAGAGC 296
Query 148 GGCTGCTTCTACCAGAAGAAAGAGGAGGACTGGATCTGCTGCGCCTGCCAGAAGACCAGATTGAAAAGGAAGAT 221
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |.
Sbjct 297 GGCTGCTTCTACCAGAAGAAAGAGGAGGACTGGATCTGCTGCGCCTGCCAGAAGACCAGA------------AC 358
Query 222 CAG-------GCCAA--CCCCAAAGAAG---AAG---------------------------------------- 243
||| ||||| ||||..|||.| |||
Sbjct 359 CAGCCGCCGTGCCAAGTCCCCTCAGAGGCCCAAGCAACAGCCAGCTGCGCCCCCCGCGGTGGTCAGAGCGCCAG 432
Query 244 -------------------------------------------------------------------------- 243
Sbjct 433 CCAAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGGTCC 506
Query 244 -------------------------------------------------------------------------- 243
Sbjct 507 CCTCCGAGGTCTGAGCGTCAGCCACGGTCCCCTCCGAGGTCTGAGCGTCAGCCACGTCCCCGCCCAGAGGTCCG 580
Query 244 -------------------------------------------------------------------------- 243
Sbjct 581 ACCACCGCCAGCCAAGCAGCGTCCCCCTCAGAAGTCCAAGCAACAGCCGCGCAGCAGCCCCCTCAGAGGGCCAG 654
Query 244 -------------------------------------------------------------------------- 243
Sbjct 655 GCGCCAGCCGTGGGGGGTCCCCCGTCAAAGCTTCTAGGTTCTGGTAACACCATCTCTTCCCTTTTGTTCCCCAG 728
Query 244 -------------------------------------------------------------------------- 243
Sbjct 729 CCCTAAGATTGAAAAGGAAGATCAGGCCAACCCCAAAGAAGAAGTGACCAAGGAGGAGTTTAAACTGAATGAAC 802
Query 244 -------------------------------------------------------------------------- 243
Sbjct 803 AACCTCGGCTCCTGGACTCATTGCTTCACAACCCATCTACCCCTGGATGAAGTTATCTGGCTTCAAATATTATG 876
Query 244 -------------------------------------------------------------------------- 243
Sbjct 877 CAGGGGCAAACACCTGCTGATGTGGCAACTGCTGATGCTCATGGTCCCCATGGCATGGGGGCCTCAGGGCAGCC 950
Query 244 -------------------------------------------------------------------------- 243
Sbjct 951 TGCCTGGAGTACTTTGAAGATGTCATCCCATTGTCTTCTGACCTCTATAATTGCCACTGAGAGATCTGCTGTCA 1024
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1025 GTCTGCTTATCCTTCCACGGACTCAAGTTTCTTCAATCTGAAGATACATGTCTTTCTCCAGGGACATGTGGAAA 1098
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1099 AAAAAAAGATGTTATACAACCATCAAAGTGGCAAAAATAAAAAAAATCAAGTATTGGCAAAGATGTGGGGAAAA 1172
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1173 TTCTCATAAGCTACTGATGAGAATTTATAAATTATTATGACACCTTTGGGTTGCAATCTGGGGATACTGGCAAA 1246
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1247 GCAGAAAATTGTACAACCTGTGATCAAGCAATAATAATTTTAGGCACCCATCCTAGAGAAAACTTGAATTCATA 1320
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1321 GAAAAAGTAGGTACACGTAAATCTGTTCAAGGAATCATTGTTTGGCATTGAAAATAGGAGAGAGATCATGAGAA 1394
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1395 ATTACCAAAATGTCCACCAATAGAATGAGTGAATCACCTGTGGTATATTTATAAATAAAAATATTAAATAGAAG 1468
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1469 GTAAAACAAATCAGACATACACACATTAGATAGATAAATTTAGAGGACAAAATAAGGAACATGAAAAGCAAATA 1542
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1543 GTAGATGGCAAATGTAATATAATATACTATGCATAAATTTTAACAACACACAATATTATATTGCATATTGCCCA 1616
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1617 ATAAGCAGAAGCCATAAGGTCTCACACTTTTCTTATAATGCAATAGAATAAAAATGACAACAAAGTAAAAGGGT 1690
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1691 ATCCCAAAAATAAAACTATCCTTTTGGAAAAAAAAAGATTTAAAATAATTCCTGGTTTGAAGAAATAACAAATT 1764
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1765 AAAAGCTATATATAAACGGTTAACAATATTAGGTGGACATATTTGTTTGAAGAGATAGGTGAAAGATAGTTGAA 1838
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1839 AAGCCTGGGGGTATATTCAAGGTTATATGTCTTAGAAAACAAAAATACTTGTTTGGGTTCAGTTTTGGATCTGG 1912
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1913 GCTTGTTCTTGTGGCTTCTGATGATTTCTGACTTGGGGAAAAATGGGGAAGAGTTGAAATACGTCCTTCCACCC 1986
Query 244 -------------------------------------------------------------------------- 243
Sbjct 1987 AAACCTTTGTTTAGTAATAGGTAGGAAAATGAAGAAGAAAATAGAATGTTGCAGAATGTGGAGGGATGTAAAAT 2060
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2061 GGACAGTACTAGGGTAGAGGGGAAGTCAGATTAGAGGAAAGAAAGAGCATCAGGAACAGTCTTGTGCTAGGAGC 2134
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2135 TGGTGTGGCCAAGCACAGTCGGATGCCCAAAGATCCAACAAGGCCATGGCTCTGTGTCCTTGAGTGGGCACAAC 2208
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2209 CATTCCTAGCCAAGTTTAAGAGGCAAGTAAAAATATAGGGGCAATGTCAGATGAAGTCTTGTTCAGGGTATGGG 2282
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2283 GCTAGGATGAGAGAGAATGCCACAGAGTATGAAGGAAGAGTGATAGATCCAGATGAGATACAGCTCAGAGTGCC 2356
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2357 ACGCCCCCAGAAAGAGGAATCAGGCAAGTACTGTCCCAAGGCAGCTGGAGGGTGAGGGCTGAGTGCCCTGGCTT 2430
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2431 CCTCACTTGGGGAGACCATGGGTCTCTGTAGAAATTCCAATATAAAGGCAGGGAAATTTGACTGCATGGAGTCT 2504
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2505 TCAGGTAGAAATGTTTCTCTTGCCTAAATTCAGGTGCTAAATAAACAACAAAATGGTAACCTCTACTATGAAGT 2578
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2579 GTTTCCAATGATGGGATATCTGAGGCCATTACATTCCTGGGAATAACATGGTGAGGTGCAGGGTGGTGGTGGTG 2652
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2653 GTGAAACATACGACAGACCACTGTAAGTGAGAACAAATTACTGGCCCAGCCCAACCCACACCAAATAAGAAATT 2726
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2727 TAATATCCCTTTGGCCTGTTTTAGATTTTGGCAAAGCCAGGCCCATAGTGCTTGCTGGGCTCTCTCTTCCACAT 2800
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2801 CATCCAGAAGACACACATTTGCTATGGAATGATTGTGGAGGTGAGAGTATAGTGCATATTAATTCATGCAAAAA 2874
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2875 GTTAGATATTAGCCCAGAAATGTTAGTAACAAGAAACTACTGAATTCTCTGTTTGTCTGTTGTGGAAATAAAAC 2948
Query 244 -------------------------------------------------------------------------- 243
Sbjct 2949 CTTCTGGGGATGAATCAAAACTATCTGACAATTACTTGAAATGGGTGAATAGCTAAATGTAATGTGCCTTGGAT 3022
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3023 ATTATAACTAAAAGGTGCTATAATCCAGTTATATTTTTTATCTTTTAAGGATTGGTTCTGAGGAGCACTACCAG 3096
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3097 TAAATATTGCAAAAATTACATAAAGCTCCAAAAGCTACTCTGTGTAAACTTCTTGAGTGGGAATTCTCAACCAT 3170
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3171 AATATCTGGAATATGACTGATAATTCTGGATGTTAACTGATTTTATGTTCTGATGTTTTGACTGGTTTTGGGAA 3244
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3245 AAATTTTGGGAAAAAAGAGTTTTCCTCGTAAATACCCAACAACTGGGTCTCTGGGTAAAAAGGCCTAATTTATA 3318
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3319 GAGATTGCTAATTTCCATGGTGTAAATATTTCCACAATGCAGATTCCTTCCTTCCTTTTTTTTTTTTTTTTTTT 3392
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3393 TGAGATGGAGTTTCACTCTTGTTACCCAGACTGGAGTGCAAAGGTGCGACCTTGGCTCACTGCAATCTTCACCT 3466
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3467 CCCGGGTTCAAGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGTGCCCACGACCATGCCTGGC 3540
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3541 TAATTTTGTATTTTTAGTAGAGATAGGGATTCACCATGTTGGCCAGGCTGGTCTCAACCTCTGGACCTCAGGTG 3614
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3615 ATCCACCCGCCTCGGCCTCCTAAAGTGCTGGAGATTACAGGCATGAGCCACCACGCCCGGACCATGATGCAGAT 3688
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3689 TTCAAGCTATGAACATGATTCTCTGGAGTTTACCATTTGTCTTTTAATTGGCAAATTTGATGCAGAATTGGGAA 3762
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3763 GAGAAGCACACAATTGACTCTCGTCAGCTGGCACAAGCTGGTGCCAGTGCACCACTGTATATATCCATGGCCCT 3836
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3837 CTGTGAAGCTAGAGTTTACTACTAAAATTTGTGCTCCATAAATATACAAAGGCACTAGTAAGAGAAAAAATATA 3910
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3911 AAGAGAATATAAACTAAATTCAAATTAGGGAGCTCAAATGGAGAAAATTGACAGATAATATTTTTGAAACTTTG 3984
Query 244 -------------------------------------------------------------------------- 243
Sbjct 3985 AAAAGTAGTATTTGTCTAGATTCACCTTTTATTACCTTTTCCTTTTTTTCTTTTCCTTTTTTTTTTTTTTTTGA 4058
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4059 GACGGAGTTTCTCTCTTGTTACCCAGGCTGGAGTGCAATGGCACGCAATCTCAGCTCATTGCAACCTCGGCTCA 4132
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4133 CTGTAACCTTCACCTTCCGTGTTCAAATGATTCTCCTGCCTCAGCCTTCCGAGTAGCTGGGATTACAGGCACCC 4206
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4207 ACCACCATGCCCAGCTAATTCTTTGTATTTTTAGTGGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGA 4280
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4281 ACCCCTGACCTCAGGTGATCCACCCACCTGGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCGCGCCC 4354
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4355 GGCCTGTTATTATCTTTTATTAAGCAAACAGCGTATCTATGTATCATACTGAGTGTTCTGAGCTGTTAGTTTCT 4428
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4429 TTGGTGTTCATCTAGATGGAAGCTGGGGCTTCCTTCCTTTCAGATATTGGTGCTAACATGAAGCTGACCAAAGA 4502
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4503 ATTGATGGGATCTGCACACTGTAAAGCCGGTTTCAGGATGGCTGAGCTGACGGTCAAGAAAGAAGAGAAGATAT 4576
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4577 GAGCCGCCTGCATTTTGGGGTGGTGGCAGTGAAATTTAGACTTGTGATTTGGTATGACAATATATGGCTTTTTG 4650
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4651 TGATTGTTAACATTAATGAAAACAAGAAAAATTAGTTGCTCAAAAGTTGAAAAATGGATTCATAAACTTTTTAT 4724
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4725 TAGAGTAAGGCAAAAGAACATATTAAAATAGAGGTAAATTAGAAATGTCAATAAGAACCCATGGACATTTTTTA 4798
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4799 TAAGGAGACTTTATCTGTTCTGTCCCTACAGTGATTTATGCTCTTGGATATTTTTGCTGTCATCCTGACAAATT 4872
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4873 CTAGTTGGAATATGGAACAAGCTTATTTGTAGACCTAGTGCCTGTGGCTTCTAAAGCAATTTTCTGAAAAGAGA 4946
Query 244 -------------------------------------------------------------------------- 243
Sbjct 4947 AACCACTGCCTGTTGGAAGAATAGTTGATTCCATACCTCAAGCTAGGGAAAAAAAATCAGAATTAGTCTGTGAA 5020
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5021 TTCTAGATGTTGAGAGAAAGCAGGGTTTCATTAGGGCATCGGAGAGTCACAAGTCCATAGGATGCAAAAAGGAA 5094
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5095 GATGAAATAAAATTGCCTGAAAAACGCACCTGAATTTCTGGCATTGTTTACTGAAAAGGCTGTGTATTGATGAA 5168
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5169 CCCCAATTATGTGAGGTCTACATTTAAGAGTTTATAATCAACAGTTTGAAAATGCAGGGTGTTGTTTCTTTCTA 5242
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5243 TAAGGAGACAAAACAGTCAGAAGGGAGTGTCACAGGACATTATCACAAAATCAAAGTTCTCCATGAAATGTGGT 5316
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5317 TCATTTGCTAGAAAATAATGCAAGCCTATTGGAGAGAATCAGGGCTTCTAGTGATGCTAGGGATGACCTTAAGC 5390
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5391 ATTGTTTGTAAATCACACTTTTTCCTAGTCTTTCAGCAGCAGCTGCACAGAGTAGGCCTGCTTCTTCCCATGAA 5464
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5465 AGCCACACTGAGTTTTATCAACTAGTAGTGTGTGGGCACTATTGCAAGTTATGTTGTGTTGTTTATGGCCATTT 5538
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5539 ATCCAACAGTGCTTTCCTCTGTGCGGGGCTCTGCAGCCTCGTTCTATGTTATTTTTATTACCACGTGTCTGTGC 5612
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5613 GCCTCAGGTGGCAAAGCAGAATCAGCTTCTCTACCCTCAGCAGGGCTCACTATGACTCACTATAAGGGAAGAAA 5686
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5687 ATCTTACAGATGTCAGAAAATGTTAGGTAAGTGGACAGTGATAAACACAAAACAGCAAGTGGTCAGTATCAAAG 5760
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5761 AGAAAAACAGTATGTTGGTGAAGGAGAAGTATCAAAGCTAGTTAAAAAAGTAACAGGAGAAATGTAAAGGGACA 5834
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5835 ATACTCCACAAAAATTTAGATTGTAACTGAGCTTCTTCTCCTAAAGAGATTTAAAAATAAAGTATAGGAAATAC 5908
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5909 ATGAAGAAACAAAGTAAAATGCCAAGGTGTAAGTTTGACCATGAATATCTAGGGAAAAACATACTTGCACTAAA 5982
Query 244 -------------------------------------------------------------------------- 243
Sbjct 5983 ACAACCAAATATGCAAAAATCAAGTGGAAAAACAGGTCAAAATAATGCCAGTTGATGTCTGTAAGAACTAAATG 6056
Query 244 ----------------------------------------- 243
Sbjct 6057 TATAATAAAATGAGCAAAAAAAATGGCCAGTTTAACACCAA 6097
