Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01142
- Subject:
- NR_110282.2
- Aligned Length:
- 4050
- Identities:
- 484
- Gaps:
- 3533
Alignment
Query 1 ATGAGCCAAGGAGACTCAAACCCAGCAGCTATTCCGCATGCAGCAGAAGATATTCAAGGAGATGACCGATGGAT 74
..|||||.|| |.|.||| |
Sbjct 1 ------------------------------------------------------GGAGGAGCTG-CTGCTGG-T 18
Query 75 GTCTCAGCACAACAGATTTGTTTTGGACTGTAAAGACAAAGAGCCTGATGTACTGTTCGTGGGA--GACTCCAT 146
| ||..|..| ||| |.|..||| |.|||.|| |.|||| |||
Sbjct 19 G-CTGGGGCC--------------GGA--GGAGGGAC---GCGCCGGA----------GCGGGACCGAC----- 57
Query 147 GGTGCAGTTAATGCAGCAATATGAGATATGGCGA-----GAGCTTTTTTCCC-----CACTTCATGCACTGAAT 210
||..|.| |||.| |||| |.|| ..||| |.|.|||..|.|
Sbjct 58 GGGACCG-------AGCGA-----------GCGACCGACGCGC----CACCCGCCGACGCCTCAGCCGC----- 104
Query 211 TTTGGAATTGGGGGAGATACAACAAG-ACATGTTTTGTGGAGACTAAAGAATGGAGAACTGGAGAATA-TTAAG 282
|||||| |..| || |||..|| .|| ||.|
Sbjct 105 -------TTGGGG---------CCCGCAC---------GGACCCT--------------------CTACTTCA- 132
Query 283 CCTAAGGTCATTGTTGTCTGGGTAGGAACAAATAACCACGAAAATACAGCAGAAGAAGTAGCAGGTGGGATCGA 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 133 ------GTCATTGTTGTCTGGGTAGGAACAAATAACCACGAAAATACAGCAGAAGAAGTAGCAGGTGGGATCGA 200
Query 357 GGCCATTGTACAACTTATCAACACAAGGCAGCCACAGGCCAAAATCATTGTATTGGGTTTGTTACCTCGAGGTG 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 201 GGCCATTGTACAACTTATCAACACAAGGCAGCCACAGGCCAAAATCATTGTATTGGGTTTGTTACCTCGAGGTG 274
Query 431 AGAAACCCAATCCTTTGAGGCAAAAGAACGCCAAGGTGAACCAACTCCTCAAGGTTTCGCTGCCGAAGCTTGCC 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 275 AGAAACCCAATCCTTTGAGGCAAAAGAACGCCAAGGTGAACCAACTCCTCAAGGTTTCGCTGCCGAAGCTTGCC 348
Query 505 AACGTGCAGCTCCTGGATACCGACGGGGGTTTTGTGCACTCGGACGGTGCCATCTCCTGCCACGACATGTTTGA 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 349 AACGTGCAGCTCCTGGATACCGACGGGGGTTTTGTGCACTCGGACGGTGCCATCTCCTGCCACGACATGTTTGA 422
Query 579 TTTTCTGCATCTGACAGGAGGGGGCTATGCAAAGATCTGCAAACCCCTGCATGAACTGATCATGCAGTTGTTGG 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 423 TTTTCTGCATCTGACAGGAGGGGGCTATGCAAAGATCTGCAAACCCCTGCATGAACTGATCATGCAGTTGTTGG 496
Query 653 AGGAAACACCTGAGGAGAAACAAACCACCATTGCC--------------------------------------- 687
|||||||||||||||||||||||||||||||||||
Sbjct 497 AGGAAACACCTGAGGAGAAACAAACCACCATTGCCTGACTGGCTCTTATCAGTGTTAATAGCATCTCAGCTTCC 570
Query 688 -------------------------------------------------------------------------- 687
Sbjct 571 TCAGATCAGTTCTATCACTGGCACTACAGAATCCTTCTCTTTCTTAAGGCACTTTGCATTGTAGAATGTTCCTG 644
Query 688 -------------------------------------------------------------------------- 687
Sbjct 645 GATGTTCATATCTAGTGTTTGAAGGGGAGGAGGGATTTAAACTGGTCCTGTACATAGAAGGTTTGTTTGACAGA 718
Query 688 -------------------------------------------------------------------------- 687
Sbjct 719 GGAGAAAAATTAGCCAAGGAAGATTGTTGTTTAAATTCATTTGAAACCAGAAGGGGACTTTTTAGTTGTATGTG 792
Query 688 -------------------------------------------------------------------------- 687
Sbjct 793 TAACACATTCATTGAATTATTATCACTGTTTTCTTGGGACAACATCAAGCCTAAATACTGAACAATATGAAGAT 866
Query 688 -------------------------------------------------------------------------- 687
Sbjct 867 TCTTTTCTTGGCCTTTCTGTGGATTATGTCATATATAATAATTATCAGAATCATTCTACTTGGCTTTAAAACAT 940
Query 688 -------------------------------------------------------------------------- 687
Sbjct 941 GTTTTCTCCAATTTTTTTAAGGTTCATAATTTAGCCTTTTGTTTTTATGTTGCTTAGATTCTTATGTATACTGA 1014
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1015 ATATTTTATTAACATGTAGCATCAGGTTGAACATGCTTGTCATTGATATATGGAAGATGCTATAGTTAGAAGTG 1088
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1089 AATTTGTTCTGCTTTCTTAATCTTTTCCATGCTTAGCAGTGAAAAACAGGTTTTGCCCCAGTAGAGGGATTCTT 1162
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1163 TGGAGGGTATTATTTTTTATGCTGCTGAATATCATGTCTATAATAGACCCGTGCATGCAGCCTTTCCTCCTTAT 1236
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1237 TCCCCTTCATGCCCCCCTTTCCCCTTCATTCCCCCCGCCACCCCGTTTTTTTTTTTTTTTTTTTTTTTTTGGTT 1310
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1311 CTTGTTGACATTACAAGCTTTTAACACATTTTTGACCTAGGAGCCCTGTTGCTGGAAGTATAGTCTCCAGCCAG 1384
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1385 TTACTCTCATGATAGTACTGCTATAAAACTCATTCTTGTGTGGTGTTCTGTGCTATAGATTCTGTGTATTGCTG 1458
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1459 TTCATATTCGGAGTTCTGGTTTTGTTTTTCCCTTAAAACCTGTTAACAGTTTTTTTTGGGGGTGGGGGGATTCA 1532
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1533 GAACTCTTGTTTCCCATTCCATAGCACCTGACATTATTTCAAGTTTTATAATATCTTAAGGTGTATATTTTATT 1606
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1607 TTTTTTATTGGCTTAGTTGTTTTTTGTTTTGTTTTGTTTGAGATGGAGTTTCACTGTTGCCCAGGCTGGGGTGC 1680
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1681 AATGGTGTGATCTTGGCTCACTGCAGCCTCCACCTCCCGAGTTCAAATGATTCTCCTGCCTCAGCTTCCTGAGT 1754
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1755 AGCTGGGATTACAGGTGCATGCCACCATGCCCGGCTAATTTTTATATTTTTATTAGAGACGGGATTTCGCCATG 1828
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1829 TTAACCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACA 1902
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1903 GGCATGAGCCACCGTGCCTGGCCTTATTGGCTTAGTTTTTAAATTATCCTCCAAAAATTTTGGGCCTTTTTCTG 1976
Query 688 -------------------------------------------------------------------------- 687
Sbjct 1977 TGGGGAAACAAGTGAAGCTGCTCTTCAGCATAGACACTACCTTTATCCCATCATTTTAGTAAAAACTAGGTTTG 2050
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2051 TTTCACTTCTGAGGTGTCTTATTAATGTACTTCATCTGAGAATTTGTTGATCTTAATGTTCGAGCTATATAAGA 2124
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2125 ACTGCCATTAAAAAAAATGGGATAATAGATGATTTTATCAGTATACCTGTGGAATATGTACAAACTGGATCTAT 2198
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2199 AGATATTTTGAACTGGACCAGGTGGGTATTGAAGTAACCCATCAAAATATGCTCTGCAGTGATTCCGCTTAATG 2272
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2273 TTTAAATTCAGTAACGTACTTGAAAGGCAAATTTCAGTGCTTTTGTATGTTGGAGGAGGGCTTACTGATGCGTG 2346
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2347 CTAAGACCGATTTCTGATTGAGGGATGAACCTTGGGCTCATTTTTTTCTTGTGAAGTCTCTTTCTAGAAAATTT 2420
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2421 TTTGGTTTTGTTCTTTTTAAAAAATACATACTTTTTTGAATGTATCATGTCTTCATTAACAACAGAAAATCCAC 2494
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2495 ATGGTGTTTACTAAACTTGTTTACGACATTAAAAATTTCCTTTTTATTTTTAGTAGCCCAGGTTGAGTTTTTCA 2568
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2569 CAAGAGATTTTTTTCTTAGCTGAGGTATAGTTGTATAGCAAGAAGAATTAAGCCAGATTTTTGTGTGTGGAAAG 2642
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2643 ACAGTTTTCTATCCACGTCTTTTTCTGTTTGTCAGAAGGTGGGAGTATGGTCCAAATAAATCCATTAGGTTACT 2716
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2717 CCTGCAGCATGCGCTTTTAGCTTCTCTCTTGACTGAGGATCAAATATCCCTTTGTGAGCTGGCCCTCAGCTCCT 2790
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2791 TTGCTCATGTGTACAAACCTCAGATGTTACTACATTTTATATCTACCAGAGCTATTCAAGCAATAGTATTTGAA 2864
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2865 CCACTAGCCTTTTAAATAAAATTCTGCCCCATTACTGATGTGCAGATATTGAGTTCACTTTCATTTTTTGCCAG 2938
Query 688 -------------------------------------------------------------------------- 687
Sbjct 2939 ATTTCTTTGCACTACTTTAGGTAAAAATAGTTAATCTATTTTTCTTTGACATCCTAGTTTGCGTCAGTGACAGA 3012
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3013 ACTTACTGCTTAGTCTTTGTACTTTTTAAAAAATCTATAAATTTAATGCACTGTCCAAGTGAAATGTCCTAGTT 3086
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3087 GTCATTGTGATTAAGGGGCCAACTTTCCAGGCAGCTAGCAGAGATACTATTCTCTTCCTCTCCCAGCAAATTTG 3160
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3161 TATTCCTTCGCCCACGCATTCCTGCTATACTAGATGGCAGCCAGTGATGGAACTATAAAGATGTCTGTGGTCAT 3234
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3235 ATGTTGAATGTGGCAGCTTGAAGATGTACTGCCACGGGTGATCTAGGGCAGGCTGTCTTCCAGTCCATGTGTTC 3308
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3309 TCGGTCGCCGTAGACAGCGCTCTGGCTACCACCGTGAGGCTACTTGAACTGTCAGGGGCATCTGCCTAAACCAG 3382
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3383 AATCTTTTGTCAGAAACCTTAACCCAACAAAACAAATCTTGAGTAGCTCATGCCCGGCTCTTAGGAATTTTGTC 3456
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3457 TGTTTAAAAAAAAAAAAAAAAAAAAAGTCCAACTTACTTTATTTTATTTTTTTAACCTAGTCACTGTTTACAAT 3530
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3531 TGTATGCTAAAGCCTGAAATATTGTCTGTGCTGTGGTGTATGAGCATTGCCAACTTTATATTTATTGCAGTGAA 3604
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3605 GAAGAAACTAAAAATATATGGAAATGAGGAGCATGTCCAAGCTCCTAAATCCGTGTGGGTGCATGTGGGAGAAG 3678
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3679 TGAGTTAGGGCCTCTTGAAAGGAGGCTTTTTGGAGAGGGGTCCCCCAGGTTTCTTGGTGTTCCTGCTTGGGGAT 3752
Query 688 -------------------------------------------------------------------------- 687
Sbjct 3753 CACTGCTGCTAGCTGACTGGACCTCCCCATTGGAAGTTTGTGATTTTGCTTTGGCAAAGTTTCATTGACTAGTA 3826
Query 688 ------------------------------------------------------ 687
Sbjct 3827 GAACTCATTCTGTTTTAGTGTATATTTCAATATAAATGTAAACATTTTGCTCAA 3880
