Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01151
- Subject:
- NM_001301259.1
- Aligned Length:
- 2754
- Identities:
- 366
- Gaps:
- 2352
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGAATAAAACGTCAGCAATTTGAAATGGTAAACCTGAGAGGATACAACTGGAAGAGCCAACAATTACTCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTTCCTGATAATTGTGGCAGCCTGGGAGGCAGGGAGCGGCCAGCTCCACTACTCCGTCCCAGAGGAAGCCAAAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACGGCACCTTCGTGGGCCGCATCGCGCAGGACCTGGGGCTGGAGCTGACGGAGCTGGTGCCCCGCCTGTTCAGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGGCGTCCAAGGACCGCGGGGACCTTCTGGAGGTAAATCTTCAGAATGGCATTTTGTTTGTGAATTCTCGCAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGACCGGGAGGAACTGTGCGGGCGGAGCGCGGAGTGTAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGTTTTCCACGTGGAGGTGGAGGTGAAGGACATTAATGACAACCCTCCCATGTTTCCAGCGACACAAAAGGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGTTTATCCTGGAGTCCAGACTGCTTGACTCGCGGTTTCCACTAGAGGGCGCGTCAGATGCAGATGTCGGTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAATGCTCTGCTGACTTACAGACTGAGCACCAATGAACATTTCTCTCTGGATGTACCGCCCAACCACGAGCAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGAAACCTCTTGGGCTGGTTTTGCGGAAACCTTTAGACAGAGAAGAAGCTGCAGAGATTCGCTTATTGCTCACG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCACCGACGGAGGCAAACCGGAGCTGACAGGCACCGTTCAATTACTCATCACCGTGCTGGATGTCAATGACAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGCTCCAGTTTTTGACAGATCTCTGTATACTGTGAAATTGCCAGAAAACGTTCCAAATGGAACATTGGTAATCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGTCAATGCCTCAGATTTGGACGAAGGCGTGAATGGGGACGTTATGTACTCATTTTCTAGTGATGTTTCTTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GATATAAAATCCAAGTTCCACATGGACACTGTGAGTGGAGAGATTACAGTTATAGGAATTATTGATTTCGAAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGTAAAGCTTACAAGATTCCATTGGAGGCACGTGATAAAGGGTTCCCACAACTGCCTGGACACTGTACCATTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTGTGGAAGTTGTAGATGCTAATGACAACGCTCCACAGTTGACGGTTAGTTCCTTGTCTCTCCCAGTATCCGAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACAGTCAACCTGGAAGAGTCGTCACTTTAATTAGCGTATTTGACCGTGATTCCGGTGCCAATGGGCAGGTGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTGCTCCCTGACTCCTCATATCCCCTTCAAGCTGGTGTCCACATTCAAAAATTACTATTCGCTCGTGCTGGACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGCTCTGGACCGAGAGACCATCGCTAACTATGATGTGATTGTGACCGCTCGCGATGGCGGTTCGCCCTCCCTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGGCCACGGCCAGCGTGTCCGTGGAGGTGGCTGATGTGAACGACAATGCTCCACTGTTTGCGCAGCCTGAATA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CACGGTGTTCGTGAAGGAGAACAACCCGCCTGGTGCGCACATCTTTACAGTGTCAGCGATGGATGCTGATGCGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGAGAATGCGCTGGTGTCCTACTCGCTGGTGGAACGGAGGGTGGGCGAGCGCTTGCTGTCGAGCTATGTGTCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTGCACGCGGAGAGCGGCAAGGTGTTCGCTCTGCAGCCTCTGGACCATGAGGAGCTGGAACTGCTGCAGTTCCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTGAGCGCGCGGGATGCTGGTGTGCCTGCCCTGGGCAGCAATGTGACTCTGCAGGTGTTTGTACTGGACGAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACGACAATGCACCTACCCTGCTGGGGCCTTTGGCTAACGGGGTTGGTGGCACAATGAATGAGGTAGTATCAAGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCTTTGGTGCCTGGTCAGGTTGTGGCGAAAGTCCGGGCCGTAGATGAGGACTCTGGATACAATGCGTGGTTGTC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TTTTGAGCTGCAGCCAGTTGCGGGTGGAGTTCGTAGTCCCTTCCGTGTAGGCCTGTACACAGGAGAAATCAGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGACACGTGCTCTGGAGGAGACAGATGCCTTGCGGCAGTGCTTGTTAGTGTTGGTGAAAGATCACGGAGAACCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TCTCTGACCGCCACAGCCACGGTGTTGCTTTCTCTGGTAGACAGCGGCCAAACACAGAAGGTCTCATCTAAGGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTCAGCTGGAGCCTCCAGAGTGGATCAGAGGCTGGTGGATGTCAACGTGTACCTGATCATCGCCATCTGCGCGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGTCCAGCCTGTTGGTGCTCACGCTACTGCTGTACACAGCGCTGCGCTGTTCGGCGACGCCCACCGATGGAGCC 2220
Query 1 -----------------------------------------------ATGGTC---------CCAGAGGC---- 14
.||||| .|||||||
Sbjct 2221 TGTGCTCCAGGGAAGCCCATGCTGGTGTGCTCCAGCGCGGTGGGGAGCTGGTCATACTCGCAGCAGAGGCGACA 2294
Query 15 -----------CTGGAGGAG------------CGGAC----TG------------------------------- 30
||||||.|| |.||| ||
Sbjct 2295 GAGAGTGTGCTCTGGAGAAGGCCCACCCAAGACCGACCTCATGGCCTTCAGCCCCAGCCTACCTCAGGGTCCCA 2368
Query 31 --------------CAAGCCCCGCCCAACACGGACTGGCGTTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGC 90
|||||||||||||||||.|||||||||||||||||.|||||||||||||||||.|||||.
Sbjct 2369 GCTCTACAGATAACCAAGCCCCGCCCAACACTGACTGGCGTTTCTCTCAAGCCCAGAGACCCGGCACGAGCGGA 2442
Query 91 TCCCAAAATGGCGATGACACCGGCACCTGGCCCAACAACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTT 164
|||||||||||.|||||.||.||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 2443 TCCCAAAATGGTGATGAAACTGGCACCTGGCCCAACAACCAGTTTGATACAGAGATGCTGCAAGCCATGATCTT 2516
Query 165 GGCGTCCGCCAGTGAAGCTGCTGATGGGAGCTCCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCC 238
|||.||.|||||.||||||||||||||||||||.||||||||||||||.||.|||||||||||..|||||||.|
Sbjct 2517 GGCCTCTGCCAGCGAAGCTGCTGATGGGAGCTCTACCCTGGGAGGGGGCGCTGGCACCATGGGTCTGAGCGCTC 2590
Query 239 GCTACGGACCCCAGTTCACCCTGCAGCACGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCC 312
|.||||||||||||||.|||||||||||||||||.||||||||||||||.||.||||||||.||||||||||||
Sbjct 2591 GATACGGACCCCAGTTTACCCTGCAGCACGTGCCTGACTACCGCCAGAACGTGTACATCCCTGGCAGCAATGCC 2664
Query 313 ACACTGACCAACGCAGCTGGCAAGCGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGG 386
||.||||||||.||.||||||||.||.|||||||||||.|||||||||||.|||||||||||||||||.|||||
Sbjct 2665 ACGCTGACCAATGCCGCTGGCAAACGAGATGGCAAGGCTCCAGCAGGTGGTAATGGCAACAAGAAGAAATCGGG 2738
Query 387 CAAGAAGGAGAAGAAG 402
||||||.|||||||||
Sbjct 2739 CAAGAAAGAGAAGAAG 2754
