Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01320
- Subject:
- NR_002319.2
- Aligned Length:
- 3781
- Identities:
- 1093
- Gaps:
- 2655
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCCGGGTTGGGCGATTAACAGGCGGTGGCTAGGGAGGACGGAGAGGGGGCGTTTGCTCCTCTGGGACTTTTCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCCTCGTTTTTTTTTTCAGATGTGGCTTGGTCTGGACGCAAGGTCCCAGCAGCCAGCTTAAGCTTACTCTTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGAAAGGGGAAAGTATCCCCTGTGGAAAGCAGTTAAACTTGTGGAGGGGGTGCGAGACGTGAGTTCTCCCCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGCCAGGCGAATGGTGTGGACTTGAGCTGGTCCAGCAGCCGGCTCGACTTGTCTGAGGGAGCCCTGGAGGGGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGGGAGGGGGCCCACAGAACGTGGGTTCTATAAAGAGACATTGGGAAGATTCGATTCCGAGAAGAGGAAGAGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGATTGAAAGAGAGCCAGGCCCTTGAGGGGGAGGGGGCTGCCAAGATGGCGTCGGCCTCCTCCGGGCCGTTGTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCGGTCGGTTTTTCTCCGTTGATCCCGCGGTCCCTTCCTGTACCTCGTCCTCAGCATCTGGAATCAAGAGTCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CATGGCATCTGAGGTGCCTTATGCCTCTGGCATGCCCATCAAGAAAATAGGCCATAGAAGTGTTGATTCCTCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGGGACAACCTCATCAGCCTTGAAAGGTGCCATCCAGTTAGGCATTACCCACACTGTGGGGAGCCTGAGTACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAACCAGAGAGTGATGTCCTCATGCAAGATTTCCACATGGTGGAGAGTATCTTCTTTCCCAGTGAAGGGAGCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTGACCCCTGCTCATCACTACAATGCCTTTCGTTTCAAGACCTATGCACCTGTTGCCTTCCGCTACTTCTGGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCTATTTGGTATCCGGCCCGATGATTACTTGTATTCCCTCTGCAGTGAGCCGCTGATTGAACTCTGTAGCTCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGAGCTAGTGGTTCCCTGTTCTATGTGTCCAGCGACGATGAGTTCATTGTTAAGACAGTCCGACATAAAGAAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAGTTTCTGCAGAAGCTGCTTCCAGGATACTACATAAACCTCAACCAGAACCCTCGGACTTTGCTGCCTAAAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCTATGGACTGTACTGTGTGCAGACAGGTGGCAAGAACATTCGGATTGTGGTGATGAACAATCTTTTACCAAGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCGGTAAAAATGCATATCAAATATGACCTCAAAGGCTCAACCTACAGGCGGCGGGCTTCCCAGAAAGAGCGAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GAAGCCTCTTCCCACATTTAAAGACCTAGACTTCTTACAAGACATCCCTGATGGTCTTTTTTTGGATGCTGACG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCACAACGCTCTCTGTAAGACCCTGCAGCGTGACTGTTTGGTGCTGCAGAGCTTCAAGATAATGGATTATAGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTCTTGATGTCAATCCATAATATAGATCATGCACAACGAGAGCCCTTAAGCAGCGAAACACAATACTCAGTTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TACTCGAAGACCAGCCCCCCAAAAGGCTCTGTATTCCACAGCCATGGAATCCATCCAGGGAGAGGCTCGACGGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGGCACCATGGAGACCGATGACCATATGGGTGGCATCCCTGCCCGGAATAGTAAAGGGGAAAGGCTTCTGCTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TATATTGGCATCATTGACATTCTACAGTCTTACAGGTTTGTTAAGAAGTTGGAGCACTCTTGGAAAGCCCTGAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ACATGACGGAGACACTGTCTCAGTGCATCGCCCAGGCTTCTATGCTGAATGGTTCCAGCGCTTCATGTGCAACA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CGGTATTTAAGAAGATTCCCTTGAAGCCTTCTCCTTCCAAAAAACTTCGGTCTGGCTCATCTTTCTCTCAGCGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCAGGCTCCAGTGGCAACTCCTGCATTACTTACCAGCCATTGGTCTCTGGGGAACACAAGGCACAAGTGACAAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AAAGGCGGAAGTGGAGCCAGGTGTTCACCTTGGTTGTCCTGATGTTTTACCTCAGACTCCACCTTTGGAGGAAA 1924
Query 1 -------------------------------------------ATGGTGTTGGAAAGCACT------ATGGT-- 23
| ||||.|.|| ||| |||.|
Sbjct 1925 TCAGTGAGGGCTCACCTACTCCTGACCCCAGTTTCTCACCTCTA----GTTGAAGAG-ACTTTGCAAATGCTAA 1993
Query 24 ----GTGTGTGGACAACAGTGAGTATATGCGGAATGGAGACTTCTTACCCACCAGGCTGCAGGCCCAGCAGGAT 93
..|||||||||||||||||||||||.|||||||||||||||||||||||.||||||||||||||||||||
Sbjct 1994 CTACAAGTGTGGACAACAGTGAGTATATGGGGAATGGAGACTTCTTACCCACCCGGCTGCAGGCCCAGCAGGAT 2067
Query 94 GCTGTCAACATAGTTTGTCATTCAAAGACCCGCAGCAACCCTGAGAACAACGTGGGCCTTATCACACTGGCTAA 167
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 2068 GCTGTCAACACAGTTTGTCATTCAAAGACCCGCAGCAACCCTGAGAACAACGTGGGCCTTATCACACTGGATAA 2141
Query 168 TGACTGTGAAGTGCTGACCACACTCACCCCAGACACTGGCCGTATCCTGTCCAAGCTACATACTGTCCAACCCA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2142 TGACTGTGAAGTGCTGACCACACTCACCCCAGACACTGGCCGTATCCTGTCCAAGCTACATACTGTCCAACCCA 2215
Query 242 AGGGCAAGATCACCTTCTGCACGGGCATCCGCGTGGCCCATCTGGCTCTGAAGCACCGACAAGGCAAGAATCAC 315
|||||||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||.||||||
Sbjct 2216 AGGGCAAGATCACCTTCTGCATGGGCATCCACGTGGCCCATCTGGCTCTGAAGCACCGACAAGGCAACAATCAC 2289
Query 316 AAGATGCGCATCATTGCCTTTGTGGGAAGCCCAGTGGAGGACAATGAGAAGGATCTGGTGAAACTGGCTAAACG 389
|||||.||||||||||||||||||||||.|||.||||||||||||||||||.||||||||||||||||||||.|
Sbjct 2290 AAGATCCGCATCATTGCCTTTGTGGGAAACCCGGTGGAGGACAATGAGAAGAATCTGGTGAAACTGGCTAAATG 2363
Query 390 CCTCAAGAAGGAGAAAGTAAATGTTGACATTATCAATTTTGGGGAAGAGGAGGTGAACACAGAAAAGCTGACAG 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2364 CCTCAAGAAGGAGAAAGTAAATGTTGACATTATCAATTTTGGGGAAGAGGAGGTGAACACAGAAAAGCTGACAG 2437
Query 464 CCTTTGTAAACACGTTGAATGGCAAAGATGGAACCGGTTCTCATCTGGTGACAGTGCCTCCTGGGCCCAGTTTG 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2438 CCTTTGTAAACACGTTGAATGGCAAAGATGGAACCGGTTCTCATCTGGTGACAGTGCCTCCTGGGCCCAGTTTG 2511
Query 538 GCTGATGCTCTCATCAGTTCTCCGATTTTGGCTGGTGAAGGTGGTGCCATGCTGGGTCTTGGTGCCAGTGACTT 611
|||||||||||||||||||.|||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 2512 GCTGATGCTCTCATCAGTTTTCCGATTTTGGCTGGTGAAGGTGGTGCCATGATGGGTCTTGGTGCCAGTGACTT 2585
Query 612 TGAATTTGGAGTAGATCCCAGTGCTGATCCTGAGCTGGCCTTGGCCCTTCGTGTATCTATGGAAGAGCAGCGGC 685
||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||
Sbjct 2586 TGAATTTGGAGTAGATCCCAGTGCTGATCCTGAGCTGGCCTTGGTCCTTCGTGTATTTATGGAAGAGCAGCGGC 2659
Query 686 AGCGGCAGGAGGAGGAGGCCCGGCGGGCAGCTGCAGCTTCTGCTGCTGAGGCCGGGATTGCTACGACTGGGACT 759
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2660 AGCGGCAGGAGGAGGAGGCCCGGCAGGCAGCTGCAGCTTCTGCTGCTGAGGCCGGGATTGCTACGACTGGGACT 2733
Query 760 GAAGACTCAGACGATGCCCTGCTGAAGATGACCATCAGCCAGCAAGAGTTTGGCCGCACTGGGCTTCCTGACCT 833
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 2734 GAAGACTCAGACGATGCCCTGCTGAAGATGACCATCAGCCAGCAAGAGTTTGGCCACACTGGGCTTCCTGACCT 2807
Query 834 AAGCAGTATGACTGAGGAAGAGCAGATTGCTTATGCCATGCAGATGTCCCTGCAGGGAGCAGAGTTTGGCCAGG 907
||||||||||||||||||||||.||||||.||.||||||||||||||||||||||||||||||||||||||.||
Sbjct 2808 AAGCAGTATGACTGAGGAAGAGAAGATTGTTTGTGCCATGCAGATGTCCCTGCAGGGAGCAGAGTTTGGCCTGG 2881
Query 908 CGGAATCAGCAGACATTGATGCCAGCTCAGCTATGGACACATCTGAGCCAGCCAAGGAGGAGGATGATTACGAC 981
|.|||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 2882 CAGAATCAGCAGACATTGATGCCAGCTCAGCCATGGACACATCTGAGCCAGCCAAGGAGGAGGATGATTACGAC 2955
Query 982 GTGATGCAGGACCCCGAGTTCCTTCAGAGTGTCCTAGAGAACCTCCCAGGTGTGGATCCCAACAATGAAGCCAT 1055
||||||||.|||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2956 GTGATGCAAGACCCTGAGTTCCTTCAGAGTGTCCTAGAGAACCTCCCAGGTGTGGATCCCAACAATGAAGCCAT 3029
Query 1056 TCGAAATGCTATGGGCTCCCTGGCCTCCCAGGCCACCAAGGACGGCAAGAAGGACAAGAAGGAGGAAGACAAGA 1129
||||||||||.||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 3030 TCGAAATGCTGTGGGCTCCCTGGCCTCCCAGGCCACCAAGGACAGCAAGAAGGACAAGAAGGAGGAAGACAAGA 3103
Query 1130 AG------------------------------------------------------------------------ 1131
||
Sbjct 3104 AGTGAGACTGGAGGGAAAGGGTAGCTGAGCCTGCTCAGGGGACTGCATGGGAAGCACGGAATATAGGGTTAGAT 3177
Query 1132 -------------------------------------------------------------------------- 1131
Sbjct 3178 GTGTGTTATCTGTAATCATTATAGCCTAAATAAAGCTTGGCAAGATTTTTTCCTTCTTTGCTTCAAAAAAAAAA 3251
Query 1132 -------------------------------------------------------------------------- 1131
Sbjct 3252 GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAA 3325
Query 1132 -------------------------------------------------------------------------- 1131
Sbjct 3326 AAGAAATCCTGATGCCTAAATCTGACCCCTTGAAATGCTGATGAGCTTCATCTGAGCTGTGTGATCTCTCATGT 3399
Query 1132 -------------------------------------------------------------------------- 1131
Sbjct 3400 GCAGCTAAGGTTGAGAACCACTAACATAAAATAATTCACATTAAAATCACCAGGAAGCTTTAATAACATTTCAA 3473
Query 1132 -------------------------------------------------------------------------- 1131
Sbjct 3474 ATACTTGGACCCAACCCCTAAAGATTCTAATTTAATTGGCCTGGGACTCAGGTACTGATATTTTTCAAAAGCTC 3547
Query 1132 -------------------------------------------------------------------------- 1131
Sbjct 3548 ACAAGGTAATTCTGAAATTCAGCAAAAGTTGAGAACCACTATTCAGACTAAGTGACTTGTCCAATGTCTCTGGG 3621
Query 1132 -------------------------------------------------------------------------- 1131
Sbjct 3622 TGCATCAGACTTTACGGCCTTCCTTACACAGGGGTTGTGAATGAAATATGGCTATGGAAAGCAATTGTTGAGTA 3695
Query 1132 -------------------------------------------------------------------------- 1131
Sbjct 3696 ATATGTTATAAAGTATGGTGGTGATGATGATGATGACAATGATGACAATATTTCTTGAGTGCGTCCTATGCACC 3769
Query 1132 ------- 1131
Sbjct 3770 AGGCACT 3776
