Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_01374
Subject:
NM_001251922.2
Aligned Length:
560
Identities:
344
Gaps:
157

Alignment

Query   1  ATGCGTGAGTACAAGCTAGTGGTCCTTGGTTCAGGAGGCGTTGGGAAGTCTGCTCTGACAGTTCAGTTTGTTCA  74
           |||||||||||.||||||||.||.|||||.||||||||||||||.|||||||||.||||.||.||.||||||||
Sbjct   1  ATGCGTGAGTATAAGCTAGTCGTTCTTGGCTCAGGAGGCGTTGGAAAGTCTGCTTTGACTGTACAATTTGTTCA  74

Query  75  GGGAATTTTTGTTGAAAAATATGACCCAACGATAGAAGATTCCTACAGAAAGCAAGTTGAAGTCGATTGC-CAA  147
           .|||||||||||.||||||||.||.||.||||||||||||||.||.|||||||||||||||||.|| ||| |||
Sbjct  75  AGGAATTTTTGTAGAAAAATACGATCCTACGATAGAAGATTCTTATAGAAAGCAAGTTGAAGTAGA-TGCACAA  147

Query 148  CAGTGTATGCTCGAAATCCTGGATACTGCAGGGACAGAGCAATTTACAGCAATGAGGGATTTGTATATGAAGAA  221
           |||||||||||.||||||.||||||||||||                                        |||
Sbjct 148  CAGTGTATGCTTGAAATCTTGGATACTGCAG----------------------------------------GAA  181

Query 222  CGGCCAAGGTTTTGCACTAGTATATTCTATTACAGCTCAGTCCACGTTTAACGACTTACAGGACCTGAGGGAAC  295
           ||                                                                        
Sbjct 182  CG------------------------------------------------------------------------  183

Query 296  AGATTTTACGGGTTAAGGACACGGAAGATGTTCCAATGATTTTGGTTGGCAATAAATGTGACCTGGAAGATGAG  369
                                        ||||||||||||.|.|||||.|||||.||||||.||||||||||.
Sbjct 184  -----------------------------GTTCCAATGATTCTTGTTGGTAATAAGTGTGACTTGGAAGATGAA  228

Query 370  CGAGTAGTTGGCAAAGAGCAGGGCCAGAATTTAGCAAGACAGTGGTGTAACTGTGCCTTTTTAGAATCTTCTGC  443
           .||||.||.||.||.||.||.||.||.|||.||||||||||.|||...||||||||.||.||||||||||||||
Sbjct 229  AGAGTTGTAGGGAAGGAACAAGGTCAAAATCTAGCAAGACAATGGAACAACTGTGCATTCTTAGAATCTTCTGC  302

Query 444  AAAGTCAAAGATCAATGTTAATGAGATATTTTATGACCTGGTCAGACAGATAAATAGGAAAACACCAG----TG  513
           |||.|||||.||.||||||||||||||.|||||||||||.||..|.||.||.||.||.|||||.||||    ||
Sbjct 303  AAAATCAAAAATAAATGTTAATGAGATCTTTTATGACCTAGTGCGGCAAATTAACAGAAAAACTCCAGTGCCTG  376

Query 514  GAAAAGAAGAAGCCT---AAAAAGAAATCATGTCTGCTGCTC  552
           |       ||||.||   ||||||..||||||||.||||||.
Sbjct 377  G-------GAAGGCTCGCAAAAAGTCATCATGTCAGCTGCTT  411