Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01374
- Subject:
- XR_001783642.2
- Aligned Length:
- 2586
- Identities:
- 520
- Gaps:
- 2034
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGCGGGGCCTGCGTGCTGCGTGCGTGCGCGTTCCGGAGGCGCCGCCGCCGCCGCTCCCGAGGCCGCTGCTCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCGCCGCCGTGCAGAGCCCGAGCCCGAGCCGCGGCCGAGAGGAGGGAGGAGGAGGAGGTGGAGGAGGCGCCGG 148
Query 1 -----------------------------------ATGCGTGAGTACAAGCTAGTGGTCCTTGGTTCAGGAGGC 39
||||||||||||||||||||.||||||||||||||||||
Sbjct 149 GCCGCGGGATTGTCAATATTTAAACAGAGCGCATCATGCGTGAGTACAAGCTAGTAGTCCTTGGTTCAGGAGGC 222
Query 40 GTTGGGAAGTCTGCTCTGACAGTTCAGTTTGTTCAGGGAATTTTTGTTGAAAAATATGACCCAACGATAGAAGA 113
||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 223 GTGGGGAAGTCTGCTCTGACAGTTCAGTTTGTTCAGGGGATTTTTGTTGAAAAATATGACCCAACGATAGAAGA 296
Query 114 TTCCTACAGAAAGCAAGTTGAAGTCGATTGCCAACAGTGTATGCTCGAAATCCTGGATACTGCAGGGACAGAGC 187
||||||||||||||||||.||.||.||||||||||||||.|||||.||.||||||||.||||||||.||.||||
Sbjct 297 TTCCTACAGAAAGCAAGTCGAGGTAGATTGCCAACAGTGCATGCTGGAGATCCTGGACACTGCAGGAACCGAGC 370
Query 188 AATTTACAGCAATGAGGGATTTGTATATGAAGAACGGCCAAGGTTTTGCACTAGTATATTCTATTACAGCTCAG 261
||||||||||||||||||||||||||||||||||.||||||||.|||||||||||.|||||.||||||||||||
Sbjct 371 AATTTACAGCAATGAGGGATTTGTATATGAAGAATGGCCAAGGGTTTGCACTAGTTTATTCAATTACAGCTCAG 444
Query 262 TCCACGTTTAACGACTTACAGGACCTGAGGGAACAGATTTTACGGGTTAAGGACACGGAAGATGTTCCAATGAT 335
||.||||||||.||.|||||.|||.||||.||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 445 TCTACGTTTAATGATTTACAAGACTTGAGAGAACAGATTTTACGGGTTAAAGACACAGAAGATGTTCCAATGAT 518
Query 336 TTTGGTTGGCAATAAATGTGACCTGGAAGATGAGCGAGTAGTTGGCAAAGAGCAGGGCCAGAATTTAGCAAGAC 409
||||||||||||||||||||||.||||||||||.||.||||||||||||||.||.|||||||||||||||||||
Sbjct 519 TTTGGTTGGCAATAAATGTGACTTGGAAGATGAACGGGTAGTTGGCAAAGAACAAGGCCAGAATTTAGCAAGAC 592
Query 410 AGTGGTGTAACTGTGCCTTTTTAGAATCTTCTGCAAAGTCAAAGATCAATGTTAA------------------- 464
|||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 593 AGTGGTGTAACTGTGCCTTTTTAGAATCTTCTGCAAAGTCAAAGATCAACGTTAATGAGATTTTTCTATAGTTC 666
Query 465 -------------------------------------------------------------------------- 464
Sbjct 667 AGAGAGATGAGGACGAACCTAGGCTGGGAACTTTCAGCATTTCTAACCAAATATTATAGTTCGAACTTGCCCTC 740
Query 465 ----------------------TGAGATATTTTATGACCTGGTCAGACAGATAAATAGGAAAACACCAGTGGAA 516
||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 741 ATCACTGAACCACCTGCTGCTGTGAGATATTTTATGACCTGGTCAGACAGATAAATAGAAAAACACCAGTGGAA 814
Query 517 AAGAAGAAGCCTAAAAAGAAATCATGTCTGCTGCTC-------------------------------------- 552
|||||||||||||||||||||||||||.||||||||
Sbjct 815 AAGAAGAAGCCTAAAAAGAAATCATGTTTGCTGCTCTAGACCTGAAGTCAGCAGCAGCTCTGAGCCAGATTACA 888
Query 553 -------------------------------------------------------------------------- 552
Sbjct 889 GAAATGAAGAACTGTTGCCTAATTGGAAAGTGCCAGCATTCCAGACTTCAAAAACGAAATCTGAAGAGGCTTCT 962
Query 553 -------------------------------------------------------------------------- 552
Sbjct 963 CCTGTTTTATATATTATGTGAAGAATTTAGATCTTATATTGGTTTGCACAAGTTCCCTGGAGACAAAGTTGCTC 1036
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1037 TGTGTATATCTCTTGGAAATAAGACATAGTATTTCTCCTTTGCAATAGCAGTTATAACAGATGTGAAATAAGAT 1110
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1111 ACTTGACTCTAATACAATTATACAGAAGAGCATGGATGCATTTCAAATGTTAGATGTACTACTATAATCAAATG 1184
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1185 ATTTCATATTGACGTTTTTATCATGACTCCTCCCTGTCAAGCACTAAAAAATTGAACCATCATACTTTATATCT 1258
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1259 GTAATGATATAGATTATGAAATCTCCTCTCAAACTCATTGCAGCAGATAACTTTTTTGAGTCATTGACTTCATT 1332
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1333 TTATATTTAAAATTATGAAAATATCATCTGTCATTATATTCTAATTAAAATTGTTTGTGCATAATGCTTTGGAA 1406
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1407 AAATGGGTCTTTTATAGGGAAAAACTGGGATAACTGATTTCTATGGCTTTCAAAGCTAGAATATATAATATACT 1480
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1481 AAACCAACTCTAATATTGCTTCTTGTGTTTTACTGTCAGATTAAATTACAGCTTTTATGGATGATTAAATTTTA 1554
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1555 GTACATTTTCATTTGGTTTGTGTCTTTTTGTTATTGTTTATTGACATAGTCCTTTATTTTATAATGACCACATT 1628
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1629 GTTTAGAGTGCAGCAGTAGCTCTTCCTTTCTGCCTGGATTCAGCAGAACACTTGGCTTTAAACTACCCTAACTG 1702
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1703 GTGATCTCTCTAGGAACAGACCTCGCACTCCTGCTCTAGATAGAGTTATTCCTACTATACAGTAAGATGCACCA 1776
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1777 TGTGACATAGAATAGTTTTATATATACTCTCTTGACCTTAAAGATTGTATCATATTGAATAAAGTATCCCACTC 1850
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1851 TGTATTATTTTTATATGTAAAAAGATAAGTTCAATACTGTATTACCAGGGTTTGACTTTGACTATCGCAAATCC 1924
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1925 TACATACACAGTTTGTAACTTCATCCAGGGAATCCTTGCCATTGTTAATTTGTTGGTGTGTGTCCACCAATGAA 1998
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1999 GTGTTAAATGAAAATTTTCAAACTTGCTCTCTAGTAGATGGAAGAACTTGAGGGAAGTGGTTGCAAGTCAGAAC 2072
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2073 ACAAAAAGGGACGTGTGACTTGACTGTATGAGCAGTGTAGAGGAATGCTGTGAAGATGGATACAGCAGCTTGCT 2146
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2147 GGCTGTACAGAGGTGCTTTTCTTTTCCTTCCCAGTTGCATTTTACAAAGGTGGGGCATATGTAGGACATGGAGC 2220
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2221 CAGGGCGATACTGCTGTATGTTCTCCATGAAGAAAGAGAAAGCAAATGGCCTGTTGGCCAGGTGCATACAGGAG 2294
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2295 AAGAAAGCAGATTGCAAGCTTAGGAAACCCTGTGCCTTGTCCCTGAAAATCAAGGAGACCAGTCCTAGAAAGTA 2368
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2369 AATCTTTGCTCAGGGATCTAGATATGGTCTCATTGCAACTAGGTGTGAAGGTGTTCATGCCTTGCTGAGATATG 2442
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2443 CCAGGTGTGTGGACAGCCCTTTAGTTACCAAGTCAGCTTTCAAATGTAAGATCCAACCAACCTGAAGAAATGTC 2516
Query 553 ---------------------------------------------------------------------- 552
Sbjct 2517 AAAAAGTACTGTTTGAAACATTGGAAATTGTATTCTTTTGATATTCTAATAAACTTAGCTACTTAACATT 2586
