Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01398
- Subject:
- NR_160660.1
- Aligned Length:
- 2328
- Identities:
- 540
- Gaps:
- 1776
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCGAGCGAGAGGCAGCCGCGCCCGCCGCCGCCCCTGCTCTGTATGCCGCTCTCTCCCGGCGCGGCCGCCGCCG 74
Query 1 --------------------------------------------------------------------ATGCCG 6
||||||
Sbjct 75 ATCACAGCAGCAGGAGCCGCCGCCGCCGCGGTTGATGTGGTTGGGCCGGGGCTGAGGAGGCCGCCAAGATGCCG 148
Query 7 CAGTCCAAGTCCCGGAAGATCGCGATCCTGGGCTACCGGTCTGTGGGGAAATCCTCATTGACGATTCAATTTGT 80
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CAGTCAAAGTCCCGGAAGATCGCGATCCTGGGCTACCGGTCTGTGGGGAAATCCTCATTGACGATTCAATTTGT 222
Query 81 TGAAGGCCAATTTGTGGACTCCTACGATCCAACCATAGAAAACACTTTTACAAAGTTGATCACAGTAAATGGAC 154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TGAAGGCCAATTTGTGGACTCCTACGATCCAACCATAGAAAACACTTTTACAAAGTTGATCACAGTAAATGGAC 296
Query 155 AAGAATATCATCTTCAACTTGTAGACACAGCCGGGCAAGATGAATATTCTATCTTTCCTCAGACATACTCCATA 228
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAGAATATCATCTTTAACTTGTAGACACAGCCGGGCAAGATGAATATTCTATCTTTCCTCAGACATACTCCATA 370
Query 229 GATATTAATGGCTATATTCTTGTGTATTCTGTTACATCAATCAAAAGTTTTGAAGTGATTAAAGTTATCCATGG 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GATATTAATGGCTATATTCTTGTGTATTCTGTTACATCAATCAAAAGTTTTGAAGTGATTAAAGTTATCCATGG 444
Query 303 CAAATTGTTGGATATGGTGGGGAAAGTACAAATACCTATTATGTTGGTTGGGAATAAGAAAGACCTGCATATGG 376
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 445 CAAATTGTTGGATATGGTGGGGAAAGTACAAATACCTATTATGTTGGTTGGAAATAAGAAAGACCTGCATATGG 518
Query 377 AAAGGGTGATCAGTTATGAAGAAGGGAAAGCTTTGGCAGAATCTTGGAATGCAGCTTTTTTGGAATCTTCTGCT 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAAGGGTGATCAGTTATGAAGAAGGGAAAGCTTTGGCAGAATCTTGGAATGCAGCTTTTTTGGAATCTTCTGCT 592
Query 451 AAAGAAAATCAGACTGCTGTGGATGTTTTTCGAAGGATAATTTTGGAGGCAGAAAAAATGGAC-GGGGCAGCTT 523
||||||||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||| ||||||||||
Sbjct 593 AAAGAAAATCAGACTGCTGTTGATGTTTTTCGAAGGATGATTTTGGAGGCAGAAAAAATGGACGGGGGCAGCTT 666
Query 524 CACAAG--GCAAGT------------------CTTCA-----TGCTCGGTGATG-------------------- 552
|||||| .|.||| ||||| |.||.|...|||
Sbjct 667 CACAAGATTCCAGTGTAGTTAGTGACGTTGTACTTCAAGACTTACTGGCATATGTGTCCTCAAAACATTCCTAC 740
Query 553 -------------------------------------------------------------------------- 552
Sbjct 741 CTCAGAGATCTTCCTCCGAGACAGCCTCAGAGGGTGAACAGTATAGACTTTGTAGAATTGGAGCACCTTCAACC 814
Query 553 -------------------------------------------------------------------------- 552
Sbjct 815 TGATGTGTTAGTCCACGCAGTACTAAGAGTTGTTGATTTCCTATACTGACAGAGGCAGTATACAGTTATAGAGG 888
Query 553 -------------------------------------------------------------------------- 552
Sbjct 889 ACAGAAGCAGAAAAAAGTTATGTTAACAGTGGAACAGGCCCAAGATCAACATTATGCGCTTGTATTATGGGGTC 962
Query 553 -------------------------------------------------------------------------- 552
Sbjct 963 CTGGAGCAGCCTGGTACCCTCAACTTCAAAGGAAAAAAGGAGTGGTTCTAATTAAAGCCCAGATTTCAGAGCTG 1036
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1037 GCATTTCCTCTTACAGCAGCTCAGAAGATATCTCTAAATGCTCACAGTTCTCTGAAGAGTATTTTTTCTTCTCT 1110
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1111 TCCCAACATCATATATACTGGCTGTGCAAAATGTGGATTGGAACTAGAAACAGATGAGAACAGGATCTACAAAC 1184
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1185 AATGTTTTAGCTGCTTGCCATTTACTATGAAGAAAATATATTATAGGCCAGCGTTAATGACTGCCGTTGATGGA 1258
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1259 AGACATAATGTTTACATCCATGTAGAATCAAAGCTGATAGAGAAGATTCTTCTCAACATTTCTGCAGACTGCCT 1332
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1333 CAACAGAGTGATAGTTCCTTCCTCAGAGATCACCTATGGGATGGTTGTGGCAGACCTGTTCCACTCCTTGTTGG 1406
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1407 CAGTCAGCGCAGAACCTTGTGTATTGAAGATTCAGAGCCTTTTTGTGTTAGATGAAAACAGCTATCCATTACAA 1480
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1481 CAAGATTTCTCCCTCCTGGATTTTTATCCTGACATGGTAAAGCATGGAGCCAATGCCCGTCTCTGAGGCCAGAG 1554
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1555 GAAGAAATTGCAGGCATTTCAAGGAAGAAGTACTGAAATGATTTGTCTTTTGAAATAAATGAATGACAGGGCTT 1628
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1629 TTGCTTTGGATTTTTTATGAAATATATTTTACAAAGAGAATTGCACTAGATATATAAATTAAAACTTTTTTCTA 1702
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1703 AGAAAATCCTGTGAGGTTTAAAAAGATTGTTTTTGTCTTTTGGTTTCTTCCTTTCTTCTGGAGAAATGATCTAC 1776
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1777 CAGTCAAGGCAATATGTAGCAGATCCCTGGGAATTAAAGGTTTGCCCATTTGTTCACTGTATTTAGTCCCTGCT 1850
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1851 ACATTCCAGGCATCGTACTAAGTATGGGGAACCACAGAGAAGACACTCCTTCAGAAACTGCTGCAGTGCTTTCG 1924
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1925 CTTATCCCTACCTAAAAAACCGTCAATGTGAAATCATTTCCTTGATTATAACTATAATGATAATGGATTAGTTT 1998
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1999 ATATAAACCTATGTTTAGACAAGTTCAAGACAAGCGTGTCTTTCTATAAAAAGTATTGAAAGTGAAGGAAATGA 2072
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2073 GATCATGTTTCAATTTATTAAAGCAGGGAAGAGCGTTCTGTGGTTAGTTCGTGTCTAGGATTTGAGTGCCTTAC 2146
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2147 TGAATGTATTTACCAGCAAACATGTAGCAATCTGTTCTCTCATTGTGATTGTGGAAGAAGCTCATGTAAAATGA 2220
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2221 TAGTCATTAATGAGGAAGTATGGCGTGGTACTTATTCTGTAAGTTCAGAGTATGCTGAGTGTTAATAGATTGTC 2294
Query 553 ---------------------------------- 552
Sbjct 2295 ATATTGCCTGAAAATAAATTCATGATGACATGAA 2328
