Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01521
- Subject:
- NR_034041.1
- Aligned Length:
- 4747
- Identities:
- 744
- Gaps:
- 4003
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGCGCTCCCGCGCGTGCGTGTTGGGATCGAATCGCTGTTTCCTTCCGCTTCTCTTCCTCTGTCTCCCCCCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATCCGTGCGCCGAGCTGATAAAGGCGCCATTTTGGAGGGGCCGCGGGAGACGTGGTGCCGCTGCGGGCTCGCT 148
Query 1 -------------------------------------------------------------ATGTCGGGAGGTG 13
|||||||||||||
Sbjct 149 CTGCCGTGCGCTAGGCTTGGTGGGAAGGCCTGTTCTCGAGTCCGCGCTTTTCGTCACCGCCATGTCGGGAGGTG 222
Query 14 GTGTGATTCGTGGCCCCGCAGGGAACAACGATTGCCGCATCTACGTGGGTAACTTACCTCCAGACATCCGAACC 87
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTGTGATTCGTGGCCCCGCAGGGAACAACGATTGCCGCATCTACGTGGGTAACTTACCTCCAGACATCCGAACC 296
Query 88 AAGGACATTGAGGACGTGTTCTACAAATACGGCGCTATCCGCGACATCGACCTCAAGAATCGCCGCGGGGGACC 161
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AAGGACATTGAGGACGTGTTCTACAAATACGGCGCTATCCGCGACATCGACCTCAAGAATCGCCGCGGGGGACC 370
Query 162 GCCCTTCGCCTTCGTTGAGTTCGAGGACCCGCGAGACGCGGAAGACGCGGTGTATGGTCGCGACGGCTATGATT 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCCCTTCGCCTTCGTTGAGTTCGAGGACCCGCGAGACGCGGAAGACGCGGTGTATGGTCGCGACGGCTATGATT 444
Query 236 ACGATGGGTACCGTCTGCGGGTGGAGTTTCCTCGAAGCGGCCGTGGAACAGGCCGAGGCGGCGGCGGGGGTGGA 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACGATGGGTACCGTCTGCGGGTGGAGTTTCCTCGAAGCGGCCGTGGAACAGGCCGAGGCGGCGGCGGGGGTGGA 518
Query 310 GGTGGCGGAGCTCCCCGAGGTCGCTATGGCCCCCCATCCAGGCGGTCTGAAAACAGAGTGGTTGTCTCTGGACT 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGTGGCGGAGCTCCCCGAGGTCGCTATGGCCCCCCATCCAGGCGGTCTGAAAACAGAGTGGTTGTCTCTGGACT 592
Query 384 GCCTCCAAGTGGAAGTTGGCAGGATTTAAAGGATCACATGCGTGAAGCAGGTGATGTATGTTATGCTGATGTTT 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCTCCAAGTGGAAGTTGGCAGGATTTAAAGGATCACATGCGTGAAGCAGGTGATGTATGTTATGCTGATGTTT 666
Query 458 ACCGAGATGGCACTGGTGTCGTGGAGTTTGTACGGAAAGAAGATATGACCTATGCAGTTCGAAAACTGGATAAC 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACCGAGATGGCACTGGTGTCGTGGAGTTTGTACGGAAAGAAGATATGACCTATGCAGTTCGAAAACTGGATAAC 740
Query 532 ACTAAGTTTAGATCTCATG------------------------------------------------------- 550
|||||||||||||||||||
Sbjct 741 ACTAAGTTTAGATCTCATGAGGTAGGTTATACACGTATTCTTTTCTTTGACCAGAATTGGATACAGTGGTCTTA 814
Query 551 -------------------------------------------------------------------------- 550
Sbjct 815 ACAGTGGAATTTCAAGGTAAGGATTCAGGCAAGGTTGTCCAAGTAAATTGCCAGATTTCTGGTTTTAGTTACAT 888
Query 551 -----------------------------------------------------------------------AGG 553
|||
Sbjct 889 TGTATTCATTCAGCATGTCTGAAGATAGATGAAAGCTTAGATCTTTCAATGGAAAGTTCTGTCTATCCAATAGG 962
Query 554 GAGAAACTGCCTACATCCGGGTTAAAGTTGATGGGCCCAGAAGTCCAAGTTATGGAAGATCTCGATCTCGAAGC 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GAGAAACTGCCTACATCCGGGTTAAAGTTGATGGGCCCAGAAGTCCAAGTTATGGAAGATCTCGATCTCGAAGC 1036
Query 628 CGTAGTCGTAGCAGAAGCCGTAGCAGAAGCAACAGCAGGAGTCGCAGTTACTCCCCAAGGAGAAGCAGAGGATC 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CGTAGTCGTAGCAGAAGCCGTAGCAGAAGCAACAGCAGGAGTCGCAGTTACTCCCCAAGGAGAAGCAGAGGATC 1110
Query 702 ACCACGCTATTCTCCCCGTCATAGCAGATCTCGCTCTCGTACA------------------------------- 744
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ACCACGCTATTCTCCCCGTCATAGCAGATCTCGCTCTCGTACATAAGATGATTGGTGACACTTTTTGTAGAACC 1184
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1185 CATGTTGTATACAGTTTTCCTTTATTCAGTACAATCTTTTCATTTTTTAATTCAAACTGTTTTGTTCAGAATGG 1258
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1259 GCTAAAGTGTTGAATTGCATTCTTGTAATATCCCCTTGCTCCTAACATCTACATTCCCTTCGTGTCTTTGATAA 1332
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1333 ATTGTATTTTAAGTGATGTCATAGACAGGATTGTTTAAATTTAGTTAACTCCATACTCTTCAGACTGTGATATT 1406
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1407 GTGTAAATGTCTATCTGCCCTGGTTTGTGTGAACTGGGATGTTGGGGGTGTTTGTGGTTATCTTACCTGGGGAA 1480
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1481 GTTCTTATGTTTATCTTGCTTTTCATGTGTCTTTCTGTAGACATATCTGAAGAGATGGATTAAGAATGCTTTGG 1554
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1555 ATTAAGGATTGTGGAGCACATTTCAATCATTTTAGGATTGTCAAAAGGAGGATTGAGGAGGATCAGATCAATAA 1628
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1629 TGGAGGCAATGGTTTGGATTGGAGAGGGCTCACTGGATCCCAATCCTTGGAGCTGGATCATTGGATTCAAATCA 1702
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1703 TAATGTGGATAGGATAGGGAGGATGAATTACCAGGATTCATGGAGCGGGATCAGATTACCAGGAACATAGGAGT 1776
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1777 GGATTCCTGCCCCAACCAAACCGCATTCGTGTGGATTTTTTTATTCAACTTAATTGGCTATTCCAAAGATTTTT 1850
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1851 TTTTTCCTATTTTTGACGATTGGAGCCCTTAAGATGCACGATGGAATTGTGTTTTGCGTTTTTTGGTAAAAGGA 1924
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1925 GCAAAGCGAGGACCTGGAGATAAACGCTGGAGCAATCTCCTTGGAAGGATTCAGCACGAGTAGATGGTAAACAT 1998
Query 745 -------------------------------------------------------------------------- 744
Sbjct 1999 TTAAAGGGGAAAGGGGGGGTTTGTTTAAAATAGTAAATCAGTAAGTCACTTCTAAATTTAAAGAAAACAAAATT 2072
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2073 GGAGTTGAAGAATAAGTAGGTTTCCAATTGGCTATTGCCGTTTTCTTTGAAAAAATAAACATTTTTTAAAAAAC 2146
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2147 TATGCATGGTTGTCCTTTTTCCTCTTCATGTAAGATTCTAACTGGGTCTATCAGTTAATCTTTAAATTGTTAAG 2220
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2221 TAAGATAAGATTTTGACTCTTGTGTTAATGTGTTAGCAAATTAAAAGTTCTTAAAAGGCAATCTAATGGTATTA 2294
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2295 GCCATCTTTTATTGTTAATTGTAAAAGTCTTCAGGGGAAAGCAAAAGGGGAGAATAAGGCATTTGTGTATGTAA 2368
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2369 CTTGGTAAATGACGGTGGGGGATGGATCTAGCATCTGAAAGATAAGCTTCTCTACTTTGTTATAAAGTGGTTAA 2442
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2443 AAAACTATAGATGCTGCTTATTTTCTGGTGGTCATAGACAACATAGGCTTTTGTGCAAAATTGGTTGATGGCTA 2516
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2517 CTAATGTTCACTTGGAGATAGCTTTTGATATTCTCAATGAAACTCATCTCAAAAAAAGGTAAGTATTAAATGTT 2590
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2591 AACATCAGCACAGATGTATTAGAACTGTTTTTTGTTTTTGAGACAGAGTCTCGCTCTGTTCTCCAGACTGGAGG 2664
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2665 GCAGTGGTGTGATCTAGGCTCACTGCAACCTCCACCCCTGGATTTGAGTGATTCTCGTGCCTCAGTCTCCCAAG 2738
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2739 TAGCTGAGACTACAAGTGTGTGCCACCCTTGCCCGGCTAATTTTGTATTTTTAGTAGAGATGTGGTTTCTCTGT 2812
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2813 GTTACCCAGGCTGGTCCCAAAACTCCTGGCCTCAAGTGATCTGCCTGCCTTGGCCTCCCAAAGTGTTAGGATTA 2886
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2887 CAGGTGTGAGCCACCATGCTCAGCCTGTAGAACTTTTAACCCAAGTCTCATTTCTTTTTTGAAAGGGAAGAGTG 2960
Query 745 -------------------------------------------------------------------------- 744
Sbjct 2961 CACAAGATTAACTGCTTCTTTGGATGAATCATTGTTAATAAAAAGCTGGGCATTTAGAATTTTGCCTTATAAGC 3034
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3035 CCTTCTCCAACCATAAGATTATTTTGTACCAAAAACTTTGGTGTTCTCTACCAAAGCAGTTAAAAACTTTTAGC 3108
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3109 CTGCTACTTCTTGTATTTGTCTACTGACAGCCCCTTGGTACTATTTAGGTTGGGGGAGGGGACCTAAAATAAAT 3182
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3183 AGACTTTAACATTTCCCTTGGGTGCTAATCATAGTTGGAAGTTGAATTTAAGGTGATTATTTGGGTGACAATTA 3256
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3257 AAAACCTAAGGAAAACCAGAAATCTTGGTAGTGGAAGAAATGTGTAAGGTCACCCCAATCGGTAGATTTTAATG 3330
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3331 AACGTTGTGGAATGTTGGGAAGAGGGGATGTTAAGTTGAATGCAGAATTTCACTAAGTACTTAGTGTAAGTTTA 3404
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3405 AGGATGTAGCTCTTTTTATCTAAGAATTCAATGTAATGGCCAAAAGGCAGATTTACTGTTTAAAAATTTGAATA 3478
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3479 ATTTTACATGACATTCTTGAAATTCTAAGAAGTTTTATGTGTAGAACATTTTAAAAATTCATCAGATTATTAAA 3552
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3553 GGGAAAATAAATGATTAATGATAATTTTGGAAGGTTAATGTGAGCTAGACTTAAGTAAACTTTGGTTCATTTGT 3626
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3627 GTTCATTGAATGTTTTGGAAATGACCAAAAAATGTAAATGGCCTTCACTCAAGTTTGAGTGTTTAAAGTTGAAA 3700
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3701 GATGTGCTCTACTAAAAGTTATAGTAATTCTAACCTCACATTGAAATGAGACAGTATTCCTTGTTATACAGGCT 3774
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3775 GAATTTGAAGATTAGAGAGGATCTAATGTTTACTTAGGTAAAGGGGCATAGGTTTTGTAGTTAAGATGACCAGA 3848
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3849 CAGCTAAAAGCTGTGATGGGAAGTATGGACTGCTCCTATTTATAGTCTCAGAAAATGGACCTTTAGGTCTCTAT 3922
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3923 CCGTATTGGCAATTATTAGAAGAAAGTTACACCCTTTTGAAACTACAAAAGCTGTCTTGGAATTTCCCCCTCTT 3996
Query 745 -------------------------------------------------------------------------- 744
Sbjct 3997 CTCCCTATTTATGTCCCCTTAGAATATTTTAGGGAGCCTATAATTATTTTCTAACCAAGGAAAAACTTAAGTCT 4070
Query 745 -------------------------------------------------------------------------- 744
Sbjct 4071 CTTTAAGAAGCAATTACTTTTCATAACATCAGATTGAATAACCCACCTTGCTGTTCAGCCCACATCCTACTGGA 4144
Query 745 -------------------------------------------------------------------------- 744
Sbjct 4145 AACAAAAGGTAAGAAACCCATTTTCTGGTTCTTGATTGTTTGGGTCTGAATTTTGTTTTTAAAACTAAGCTAAG 4218
Query 745 -------------------------------------------------------------------------- 744
Sbjct 4219 TTTAATGTTTTTTAAAATGCTGTTTGGAATATGAATAGATTCCCCGTAAAATGATTTTTCCTAAGTTTTATGCT 4292
Query 745 -------------------------------------------------------------------------- 744
Sbjct 4293 TTAGTAAATATTCAGTGCTCACGTCTGTGCATCATAGTGCTTGCGTTTAATATGATTTATTGTAGAATCTCAAC 4366
Query 745 -------------------------------------------------------------------------- 744
Sbjct 4367 TTTTCTTGGTGTTTGTTGTCTTTGAAACATTGTCTTGGTCATTAGGGCTGGTGTTTTCACATTTCTGTGGTCAA 4440
Query 745 -------------------------------------------------------------------------- 744
Sbjct 4441 GGTGGATTTCTTATGTGTGCCTTTTTGCTTACTTTGTATATGAATTTTGTAATTTAAATTGCAAGTAAGTTATA 4514
Query 745 -------------------------------------------------------------------------- 744
Sbjct 4515 TATATGTATTTACCATAAATAGTATTAAAAGATGAGAAACTGTTAGACTGAAGTTCTGTTGTAACATAACCATT 4588
Query 745 -------------------------------------------------------------------------- 744
Sbjct 4589 ATTTCCATCACAGTATGAAGACTGCAAACGCAGAAAACAGATTACAGTCTCTTATCCATTTTTTGAAATCCAAA 4662
Query 745 -------------------------------------------------------------------------- 744
Sbjct 4663 AACTACGAAAACAAAAGATTTTCTGTTGTTGAGCTAATTAAATGTGAACCCTGACCAGAAAAAAAAAAAAAAAA 4736
Query 745 ----------- 744
Sbjct 4737 AAAAAAAAAAA 4747
