Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01524
- Subject:
- XR_001750508.2
- Aligned Length:
- 2058
- Identities:
- 816
- Gaps:
- 1242
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTTTGTGGAGCGCCAGAGCTGCTAAGTGCGTCAGTTGTGGAGTGGCGTAGACGAGTTAAGTCCTGGTCTGCGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGGTCGACGACTCCGTCGCAGACTACGGACCTGTCTGGGTCTCAGCCGCCAAAGACCCCGTCCGGTAGGAAG 148
Query 1 ---------------ATGAGTGGCTGTCGGGTATTCATCGGGAGACTAAATCCAGCGGCCAGGGAGAAGGACGT 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TACTAGCCGGACATCATGAGTGGCTGTCGGGTATTCATCGGGAGACTAAATCCAGCGGCCAGGGAGAAGGACGT 222
Query 60 GGAAAGATTCTTCAAGGGATATGGACGGATAAGAGATATTGATCTGAAAAGAGGCTTTGGTTTTGTGGAATTTG 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGAAAGATTCTTCAAGGGATATGGACGGATAAGAGATATTGATCTGAAAAGAGGCTTTGGTTTTGTGGAATTTG 296
Query 134 AGGATCCAAGGGATGCAGATGATGCTGTGTATGAGCTTGATGGAAAAGAACTCTGTAGTGAAAGGGTTACTATT 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AGGATCCAAGGGATGCAGATGATGCTGTGTATGAGCTTGATGGAAAAGAACTCTGTAGTGAAAGGGTTACTATT 370
Query 208 GAACATGCTAGGGCTCGGTCACGAGGTGGAAGAGGTAGAGGACGATACTCTGACCGTTTTAGTAGTCGCAGACC 281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GAACATGCTAGGGCTCGGTCACGAGGTGGAAGAGGTAGAGGACGATACTCTGACCGTTTTAGTAGTCGCAGACC 444
Query 282 TCGAAATGATAGACGAAATGCTCCACCTGTAAGAACAGAAAATCGTCTTATAGTTGAGAATTTATCCTCAAGAG 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TCGAAATGATAGACGAAATGCTCCACCTGTAAGAACAGAAAATCGTCTTATAGTTGAGAATTTATCCTCAAGAG 518
Query 356 TCAGCTGGC----------------------------------------------------------------- 364
|||||||||
Sbjct 519 TCAGCTGGCAGCCTGTCTGTGTCGTTGGCCTTATGACGAGGAGTGCCTGTGGGTTATCCTAATCGTTGTCTTGG 592
Query 365 -------------------------------------------------------------------------- 364
Sbjct 593 TCACTCTTGGTTGGGCCTGGTTGACTTTGCCAGTCAGCTCCTACAGTGATCAGTTGGCCACCTCTAGATCTGTG 666
Query 365 -------------------------------------------------------------------------- 364
Sbjct 667 TTTGCCGGTCTAGACGTTATCGGTGCACTTCCTTGAAGTGCCAGGTTGCAGCGATCCCAGAGCGTTGATAACGT 740
Query 365 -------------------------------------------------------------------------- 364
Sbjct 741 GATCTGATCCCTAAGTTGAGACCTGTCTTCCTGTAACGCTTCCGAATAAGAGGTCCGGTCGAAAAGAGTTGAAA 814
Query 365 -------------------------------------------------------------------------- 364
Sbjct 815 GATACGAAATTAGGTGGTCGTTGGAATCCTGATCGCAGTAAAGTGGTCCTTGGTAACTGCTCGAGTAGAACATG 888
Query 365 -------------------------------------------------------------------------- 364
Sbjct 889 TCTGCATCCGCCAATAGTCCGCTAATAGGGAGGGCTGTGCGATTAAAGGCTTCCATCGATTGGGTAGTGTCCTT 962
Query 365 -------------------------------------------------------------------------- 364
Sbjct 963 CAAGTGGGTGGCGAAGAGCCAGTCGGGCATATGTCATGAAGGTTTCTCCGACCGATTAATGGTTTGCTGCTTGA 1036
Query 365 -----------------------AGGATCTCAAAGATTTCATGAGACAAGCTGGGGAAGTAACGTTTGCGGATG 415
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTAGCCTAGGGAAATAATAATAAAGGATCTCAAAGATTTCATGAGACAAGCTGGGGAAGTAACGTTTGCGGATG 1110
Query 416 CACACCGACCTAAATTAAATGAAGGGGTGGTTGAGTTTGCCTCTTATGGTGACTTAAAGAATGCTATTGAAAAA 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CACACCGACCTAAATTAAATGAAGGGGTGGTTGAGTTTGCCTCTTATGGTGACTTAAAGAATGCTATTGAAAAA 1184
Query 490 CTTTCTGGAAAGGAAATAAATGGGAGAAAAATAAAATTAATTGAAGGCAGCAAAAGGCACAGTAGGTCAAGAAG 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTTTCTGGAAAGGAAATAAATGGGAGAAAAATAAAATTAATTGAAGGCAGCAAAAGGCACAGTAGGTCAAGAAG 1258
Query 564 CAGGTCTCGATCCCGGACCAGAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTAGTCGCAAATCTTACA 637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CAGGTCTCGATCCCGGACCAGAAGTTCCTCTAGGTCTCGTAGCCGATCCCGTTCCCGTAGTCGCAAATCTTACA 1332
Query 638 GCCGGTCAAGAAGCAGGAGCAGGAGCCGGAGCCGGAGCAAGTCCCGTTCTGTTAGTAGGTCTCCCGTGCCTGAG 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GCCGGTCAAGAAGCAGGAGCAGGAGCCGGAGCCGGAGCAAGTCCCGTTCTGTTAGTAGGTCTCCCGTGCCTGAG 1406
Query 712 AAGAGCCAGAAACGTGGTTCTTCAAGTAGATCTAAGTCTCCAGCATCTGTGGATCGCCAGAGGTCCCGGTCCCG 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AAGAGCCAGAAACGTGGTTCTTCAAGTAGATCTAAGTCTCCAGCATCTGTGGATCGCCAGAGGTCCCGGTCCCG 1480
Query 786 ATCAAGGTCCAGATCAGTTGACAGTGGCAAT------------------------------------------- 816
|||||||||||||||||||||||||||||||
Sbjct 1481 ATCAAGGTCCAGATCAGTTGACAGTGGCAATTAAACTGTAAATAACTTGCCCTGGGGGCCTTTTTTTAAAAAAC 1554
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1555 AAAAACCACAAAAATTCCCAAACCATACTTGCTAAAAATTCTGGTAAGTATGTGCTTTTCTGTGGGGGTGGGAT 1628
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1629 TTGGAAGGGGGGTTGGGTTGGGCTGGATATCTTTGTAGATGTGGACCACCAAGGGGTTGTTGAAAACTAATTGT 1702
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1703 ATTAAATGTCTTTTGATAAGCCTTCTGCTCACATTTTTGTGAATGTCTGAAGTATATAGTTTGTGTATATTGAC 1776
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1777 AGAGCTCTTTTATAACTAAAGCAAATTTAATTTTTTTGTACTAGAAAAAAATTTGAACATTTTAGTTCTTGGTT 1850
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1851 ATAAAAATGTTAATTCAGAATTAGTTTAATGCCTTAATTAAACTAATTAATAGCTTTGGACACTTAAAAGAGCT 1924
Query 817 -------------------------------------------------------------------------- 816
Sbjct 1925 CTAAATTTGCTTGTACATAAAGGCTTAATTTGTTTTCCTTGTTAGGGTCAAGGGTGTCCTCCACTCTTTAACAG 1998
Query 817 ------------------------------------------------------------ 816
Sbjct 1999 CTGCTGGACAGACACATTAGAGCAGCTGTTTGTTATTGATAATAAAATATTATAAAACTA 2058
