Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01534
- Subject:
- NR_073019.3
- Aligned Length:
- 2286
- Identities:
- 941
- Gaps:
- 1345
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGCGTCCCCACTATGGCGGCGCCCATGCAGCCCAGCGCGTTGTGGGCTCCCGCCGGGGTCCCCCGCGGCTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCCGCCGCCTACGCCGCTGCCTCCGCCTTCCTGCCCCGCGTCGGGCCGGGCGCCACCTCCCCCCTGCCTCCCT 148
Query 1 ----------------------------------------ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGC 34
||||||||||||||||||||||||||||||||||
Sbjct 149 CTCCGCTGTGGTCATTTAGGAAATCGTAAATCATGTGAAGATGGGACTCTTGGTATTTGTGCGCAATCTGCTGC 222
Query 35 TAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGTGGGAG 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTATTCTGCGTGGAAGCTACACTTACTCCAGTGGGAG 296
Query 109 GAGGACTCCAATTCAGTGGTTCTTTCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGGTTGGG 182
||||||||||
Sbjct 297 GAGGACTCCA---------------------------------------------------------------- 306
Query 183 CTTCCTCCTGAATCTGGACTCTAAACTGCCTGCTGAATTAGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTT 256
Sbjct 307 -------------------------------------------------------------------------- 306
Query 257 GCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTG 330
||||||||||||||||||||||||||||
Sbjct 307 ----------------------------------------------GTTCTCCAAGCCAGCACCCATGTTCCTG 334
Query 331 GATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCT 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 335 GATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCT 408
Query 405 GATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCT 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 409 GATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCT 482
Query 479 GCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTG 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 483 GCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAATTGACGACTATGACATTGTG 556
Query 553 GTG--------------------------------AGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGAC 594
||| |||||||||||||||||||||||||||||||||||||||
Sbjct 557 GTGAGGCCCAGGCTCTGAGTGGGCCTGCTCTCTGTAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGAC 630
Query 595 GTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGA 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 631 GTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGA 704
Query 669 TTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAG 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 705 TTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAG 778
Query 743 TGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTC 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 TGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTC 852
Query 817 AACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGG 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 853 AACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGG 926
Query 891 GAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGAT 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 927 GAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGAT 1000
Query 965 TTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAG 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1001 TTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAG 1074
Query 1039 TCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCT 1112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1075 TCCTGGACGCACAATATCCAGCGAGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCT 1148
Query 1113 AAGCAGTGGCATC------------------------------------------------------------- 1125
|||||||||||||
Sbjct 1149 AAGCAGTGGCATCTGAGTGGGCCCAGCACATGGCCATAGAGGCCCAGGCACCACCAGGAGCAGCAGCCAGCACC 1222
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1223 ACCTACACAGGAGTCTTCAGACCCAGAGAAGGACGGTGCCAAGGGCCCCAGGGGCAGCAAGGCCTTGGTGGAGC 1296
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1297 AGCCAGAGCTGTGCCTGCTCAGCAGCCAGTCTCAGAGACCAGCACTCAGCCTCATTCAGCATGGGTCCTTGATG 1370
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1371 CCAGAGGGCCAGCAGGCTCCTGGCTGTGCCCAGCAGGCCCAGCATGCAGGTGGTGGGACACTGGGCAGCAAGGC 1444
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1445 TGCTGCCGGAATCACTTCTCCAATCAGTGTTTGGTGTATTATCATTTTGTGAATTTGGGTAGGGGGGAGGGTAG 1518
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1519 GGATAATTTATTTTTAAATAAGGTTGGAGATGTCAAGTTGGGTTCACTTGCCATGCAGGAAGAGGCCCACTAGA 1592
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1593 GGGCCCATCAGGCAGTGTTACCTGTTAGCTCCCTGTGGGGCAGGAGTGCCAGGACCAGCCTGTACCTTGCTGTG 1666
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1667 GGGCTACAGGATGGTGGGCAGGATCTCAAGCCAGCCCCCTCCAGCTCATGACACTGTTTGGCCTTTCTTGGGGA 1740
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1741 GAAGGCGGGGTATTCCCACTCACCAGCCCTAGCTGTCCCATGGGGAAACCCTGGAGCCATCCCTTCGGAGCCAA 1814
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1815 CAAGACCGCCCCAGGGCTATAGCAGAAAGAACTTTAAAGCTCAGGAGGGTGACGCCCAGCTCCGCCTGCTGGGA 1888
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1889 AGAGCTCCCCTCCACAGCTGCAGCTGATCCATAGGACTACCGCAGGCCCGGACTCACCAACTTGCCACATGTTC 1962
Query 1126 -------------------------------------------------------------------------- 1125
Sbjct 1963 TAGGTTTCAGCAACAAGACTGCCAGGTGGTTGGGTTCTGCCTTTAGCCTGGACCAAAGGGAAGTGAGGCCCAAG 2036
Query 1126 ------------------------------------------------------------------ 1125
Sbjct 2037 GAGCTTACCCAAGCTGTGGCAGCCGTCCCAGGCCACCCCCATGGAAGCAATAAAGCTCTTCCCTGA 2102
