Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_01534
• Subject: XM_011541980.3
• Aligned Length: 1322
• Identities: 928
• Gaps: 382

Alignment

Query    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCAATTCAGTGGTTCTTTCCTTTGACTCCGCTG  148
                                                                                   .||
Sbjct    1  -----------------------------------------------------------------------ATG  3

Query  149  GACAAACACTAGGCTCAGAGTATGATC-GGTTGGGCTTCCTCCTGAATCTGGACTCTAAACTGCCTGCTGAATT  221
            .|||.||||.||..||||||..||  | ||              |||     |.|.||||..||||||||||||
Sbjct    4  AACACACACCAGTGTCAGAGAGTG--CAGG--------------GAA-----AGTGTAAATGGCCTGCTGAATT  56

Query  222  AGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCT  295
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   57  AGCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCT  130

Query  296  TCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTC  369
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  131  TCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTC  204

Query  370  GTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCT  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  205  GTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCT  278

Query  444  GACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGT  517
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  279  GACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGT  352

Query  518  CTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAG  591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  353  CTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAG  426

Query  592  GACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCG  665
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  427  GACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCG  500

Query  666  CGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGA  739
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  501  CGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGA  574

Query  740  GAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATC  813
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  575  GAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATC  648

Query  814  CTCAACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCG  887
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  649  CTCAACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCG  722

Query  888  GGGGAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAG  961
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  723  GGGGAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAG  796

Query  962  GATTTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAA  1035
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  797  GATTTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAA  870

Query 1036  GAG-----------------------------------------------------------------------  1038
            |||                                                                       
Sbjct  871  GAGCCAAGACCCCATGTGGAAAATCTGAACCCTTCTGAACTCCGCTTGCCACACTTCTGCTTTGACCACCAGCC  944

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct  945  TTCCACTGATCCCAGCCTGAAACCTGGAAATCTTGGGCCAGTTCTTCAACAGCTTCTCTGCTGCTACATCTGGG  1018

Query 1039  ---------------------------------------------------TCCTGGACGCACAATATCCAGCG  1061
                                                               |||||||||||||||||||||||
Sbjct 1019  TGATGGGAGGTTGTTGGAGGGAACCTCCCATCTGTGCAGATTCCTGTTTCTTCCTGGACGCACAATATCCAGCG  1092

Query 1062  AGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATC  1125
            |||||||||||||||||||||||||||||||||||||||||||||                   
Sbjct 1093  AGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCAC-------------------  1137