Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_01534
• Subject: XM_011541986.3
• Aligned Length: 1340
• Identities: 771
• Gaps: 562

Alignment

Query    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74

Query   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCA------------------------------  118
            ||||||||||||||||||||||||||||||||||||||||||||                              
Sbjct   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCAGTAAGTATAGTCACTCTAGCTCACCCCAGG  148

Query  119  ---------------ATTCAGTGGTTCTTTCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGG  177
                           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGAAGCCTGTTGCAGATTCAGTGGTTCTTTCCTTTGACTCCGCTGGACAAACACTAGGCTCAGAGTATGATCGG  222

Query  178  TTGGGCTTCCTCCTGAATCTGGACTCTAAACT------------------------------------------  209
            ||||||||||||||||||||||||||||||||                                          
Sbjct  223  TTGGGCTTCCTCCTGAATCTGGACTCTAAACTCTCACCGAGGACTCTCTGCACGGTGGTTTTTGGCCTTGACTG  296

Query  210  --------------------------------------------------------------------------  209
                                                                                      
Sbjct  297  CATATTGGAATCACCTGGAGAGCCTAAAAAATTACTGATGCCTGCATCCCACCCTCTAGAGATTTTGAAGTCAC  370

Query  210  ----------------------------------------------GCCTGCTGAATTAGCCACCAAGTACGCA  237
                                                          ||||||||||||||||||||||||||||
Sbjct  371  TGAGCGAGGACACAGCCTTTGCATTAGGATTTTTAAAGCTGCCCAGGCCTGCTGAATTAGCCACCAAGTACGCA  444

Query  238  AACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAA  311
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AACTTTTCAGAGGGAGCTTGCAAGCCTGGCTATGCTTCAGCCTTGATGACGGCCATCTTCCCCCGGTTCTCCAA  518

Query  312  GCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGA  385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTCGTGCCGCCTTTTGGGA  592

Query  386  TCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGAC  459
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCTGACCCCTGCCTTGGAC  666

Query  460  AGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAAT  533
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGTCTCTGGGGTCACGAAT  740

Query  534  TGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAA  607
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAGGACGTGGGCAGCAAAA  814

Query  608  CGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTC  681
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCGCGATTCTCTCTTTGTC  888

Query  682  CTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAGTGAGTGCATCGGA  755
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           
Sbjct  889  CTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGAGAGTG-----------  951

Query  756  TGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATCCTCAA-CCCATATTTC  828
                                   |||  .|.||||||                       ||| .||| |.|.|
Sbjct  952  -----------------------CTC--TTTCCCAAG-----------------------CAAGGCCA-AGTAC  976

Query  829  A-------TCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCGGGGGAACA  895
            |       ||.||.|||                                                         
Sbjct  977  AGGCAGTGTCAAGTAGG---------------------------------------------------------  993

Query  896  TCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAGGATTTGGC  969
                                                                                      
Sbjct  994  --------------------------------------------------------------------------  993

Query  970  TATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAAGAGTCCTG  1043
                                                                                      
Sbjct  994  --------------------------------------------------------------------------  993

Query 1044  GACGCACAATATCCAGCGAGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCTAAGCA  1117
                                                                                      
Sbjct  994  --------------------------------------------------------------------------  993

Query 1118  GTGGCATC  1125
                    
Sbjct  994  --------  993