Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_01534
• Subject: XM_017002115.1
• Aligned Length: 1322
• Identities: 821
• Gaps: 496

Alignment

Query    1  ATGGGACTCTTGGTATTTGTGCGCAATCTGCTGCTAGCCCTCTGCCTCTTTCTGGTACTGGGATTTTTGTATTA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TTCTGCGTGGAAGCTACACTTACTCCAGTGGGAGGAGGACTCCAATTCAGTGGTTCTTTCCTTTGACTCCGCTG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GACAAACACTAGGCTCAGAGTATGATCGGTTGGGCTTCCTCCTGAATCTGGACTCTAAACTGCCTGCTGAATTA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GCCACCAAGTACGCAAACTTTTCAGAGGGAGCTTGCAAGCCTG-GCTATGCTTCAGCCTTGATGACGGCCATCT  295
                                                |.||||| .|||||||              ||..|   
Sbjct    1  ------------------------------------ATGCCTGAACTATGCT--------------GGGAA---  21

Query  296  TCCCCCGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTC  369
                 .||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   22  -----AGGTTCTCCAAGCCAGCACCCATGTTCCTGGATGACTCCTTTCGCAAGTGGGCTAGAATCCGGGAGTTC  90

Query  370  GTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCT  443
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   91  GTGCCGCCTTTTGGGATCAAAGGTCAAGACAATCTGATCAAAGCCATCTTGTCAGTCACCAAAGAGTACCGCCT  164

Query  444  GACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGT  517
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  165  GACCCCTGCCTTGGACAGCCTCCGCTGCCGCCGCTGCATCATCGTGGGCAATGGAGGCGTTCTTGCCAACAAGT  238

Query  518  CTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAG  591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  239  CTCTGGGGTCACGAATTGACGACTATGACATTGTGGTGAGACTGAATTCAGCACCAGTGAAAGGCTTTGAGAAG  312

Query  592  GACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCG  665
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  313  GACGTGGGCAGCAAAACGACACTGCGCATCACCTACCCCGAGGGCGCCATGCAGCGGCCTGAGCAGTACGAGCG  386

Query  666  CGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGA  739
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  387  CGATTCTCTCTTTGTCCTCGCCGGCTTCAAGTGGCAGGACTTTAAGTGGTTGAAATACATCGTCTACAAGGAGA  460

Query  740  GAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATC  813
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  461  GAGTGAGTGCATCGGATGGCTTCTGGAAATCTGTGGCCACTCGAGTGCCCAAGGAGCCCCCTGAGATTCGAATC  534

Query  814  CTCAACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCG  887
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  535  CTCAACCCATATTTCATCCAGGAGGCCGCCTTCACCCTCATTGGCCTGCCCTTCAACAATGGCCTCATGGGCCG  608

Query  888  GGGGAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAG  961
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  609  GGGGAACATCCCTACCCTTGGCAGTGTGGCAGTGACCATGGCACTACACGGCTGTGACGAGGTGGCAGTCGCAG  682

Query  962  GATTTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAA  1035
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  683  GATTTGGCTATGACATGAGCACACCCAACGCACCCCTGCACTACTATGAGACCGTTCGCATGGCAGCCATCAAA  756

Query 1036  GAG-----------------------------------------------------------------------  1038
            |||                                                                       
Sbjct  757  GAGCCAAGACCCCATGTGGAAAATCTGAACCCTTCTGAACTCCGCTTGCCACACTTCTGCTTTGACCACCAGCC  830

Query 1039  --------------------------------------------------------------------------  1038
                                                                                      
Sbjct  831  TTCCACTGATCCCAGCCTGAAACCTGGAAATCTTGGGCCAGTTCTTCAACAGCTTCTCTGCTGCTACATCTGGG  904

Query 1039  ---------------------------------------------------TCCTGGACGCACAATATCCAGCG  1061
                                                               |||||||||||||||||||||||
Sbjct  905  TGATGGGAGGTTGTTGGAGGGAACCTCCCATCTGTGCAGATTCCTGTTTCTTCCTGGACGCACAATATCCAGCG  978

Query 1062  AGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCACTGATCTAAGCAGTGGCATC  1125
            |||||||||||||||||||||||||||||||||||||||||||||                   
Sbjct  979  AGAGAAAGAGTTTCTGCGGAAGCTGGTGAAAGCTCGCGTCATCAC-------------------  1023