Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01551
- Subject:
- XM_011239399.2
- Aligned Length:
- 2039
- Identities:
- 1127
- Gaps:
- 769
Alignment
Query 1 ATGGCAACGCTGATTACCAGTACTACAGCTGCTACCGCCGCTTCTGGTCCTTTGGTGGACTACCTATGGATGCT 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CATCCTGGGCTTCATTATTGCATTTGTCTTGGCATTCTCCGTGGGAGCCAATGATGTAGCAAATTCTTTTGGTA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAGCTGTGGGCTCAGGTGTAGTGACCCTGAAGCAAGCCTGCATCCTAGCTAGCATCTTTGAAACAGTGGGCTCT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GTCTTACTGGGGGCCAAAGTGAGCGAAACCATCCGGAAGGGCTTGATTGACGTGGAGATGTACAACTCGACTCA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGGGCTACTGATGGCCGGCTCAGTCAGTGCTATGTTTGGTTCTGCTGTGTGGCAACTCGTGGCTTCGTTTTTGA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGCTCCCTATTTCTGGAACCCATTGTATTGTTGGTGCAACTATTGGTTTCTCCCTCGTGGCAAAGGGGCAGGAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGTGTCAAGTGGTCTGAACTGATAAAAATTGTGATGTCTTGGTTCGTGTCCCCACTGCTTTCTGGAATTATGTC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TGGAATTTTATTCTTCCTGGTTCGTGCATTCATCCTCCATAAGGCAGATCCAGTTCCTAATGGTTTGCGAGCTT 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 TGCCAGTTTTCTATGCCTGCACAGTTGGAATAAACCTCTTTTCCATCATGTATACTGGAGCACCGTTGCTGGGC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 TTTGACAAACTTCCTCTGTGGGGTACCATCCTCATCTCGGTGGGATGTGCAGTTTTCTGTGCCCTTATCGTCTG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GTTCTTTGTATGTCCCAGGATGAAGAGAAAAATTGAACGAGAAATAAAGTGTAGTCCTTCTGAAAGCCCCTTAA 814
||||||||||||||||||||||||.||||||.||||||.||||||||.|||||||
Sbjct 1 -------------------ATGAAGAGAAAAATTGAACGAGAAGTAAAGTCTAGTCCGTCTGAAAGTCCCTTAA 55
Query 815 TGGAAAAAAAGAATAGCTTGAAAGAAGACCATGAAGAAACAAAGTTGTCTGTTGGTGATATTGAAAACAAGCAT 888
|||||||.||||..|.|||.||||||||||||||||||||||||.||.||..|||.||..||||..|.|.|.||
Sbjct 56 TGGAAAAGAAGAGCAACTTAAAAGAAGACCATGAAGAAACAAAGATGGCTCCTGGAGACGTTGAGCATAGGAAT 129
Query 889 CCTGTTTCTGAGGTAGGGCCTGCCACTGTGCCCCTCCAGGCTGTGGTGGAGGAGAGAACAGTCTCATTCAAACT 962
|||||.||||||||||.|..||||||||.|||.||||.||||||||||||||||||.||.||.|||||||||||
Sbjct 130 CCTGTGTCTGAGGTAGTGTGTGCCACTGGGCCACTCCGGGCTGTGGTGGAGGAGAGGACGGTGTCATTCAAACT 203
Query 963 TGGAGATTTGGAGGAAGCTCCAGAGAGAGAGAGGCTTCCCAGCGTGGACTTGAAAGAGGAAACCAGCATAGATA 1036
|||.||..|||||||.|||||.|||.|||||.||||||||| |||||.||||.|||||.|||||||||||.|
Sbjct 204 TGGTGACCTGGAGGAGGCTCCGGAGCGAGAGCGGCTTCCCA---TGGACCTGAAGGAGGAGACCAGCATAGACA 274
Query 1037 GCACCGTGAATGGTGCAGTGCAGTTGCCTAATGGGAACCTTGTCCAGTTCAGTCAAGCCGTCAGCAACCAAATA 1110
|||||.|.|||||||||||||||||||||||||||||||||||.||||||||||||.|.|||||||||||.||.
Sbjct 275 GCACCATCAATGGTGCAGTGCAGTTGCCTAATGGGAACCTTGTTCAGTTCAGTCAAACTGTCAGCAACCAGATC 348
Query 1111 AACTCCAGTGGCCACTACCAGTATCACACCGTGCATAAGGATTCCGGCCTGTACAAAGAGCTACTCCATAAATT 1184
|||||||||||||||||.|||||||||||||||||.||||||||.|||.|||||||.|||||.||||||||.||
Sbjct 349 AACTCCAGTGGCCACTATCAGTATCACACCGTGCACAAGGATTCTGGCTTGTACAAGGAGCTGCTCCATAAGTT 422
Query 1185 ACATCTTGCCAAGGTGGGAGATTGCATGGGAGACTCCGGTGACAAACCCTTAAGGCGCAATAATAGCTATACTT 1258
||||||.||||||||||||||.|||||||||||.||.||.|||||.|||||.||.|||||.||.|||||.||||
Sbjct 423 ACATCTGGCCAAGGTGGGAGACTGCATGGGAGATTCTGGGGACAAGCCCTTGAGACGCAACAACAGCTACACTT 496
Query 1259 CCTATACCATGGCAATATGTGGCATGCCTCTGGATTCATTCCGTGCCAAAGAAGGTGAACAGAAGGGCGAAGAA 1332
||||.||.||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||.||.|||
Sbjct 497 CCTACACTATGGCAATATGTGGCATGCCCCTGGATTCATTCCGTGCCAAAGAAGGTGAACAAAAGGGAGATGAA 570
Query 1333 ATGGAGAAGCTGACATGGCCTAATGCAGACTCCAAGAAGCGAATTCGAATGGACAGTTACACCAGTTACTGCAA 1406
|||||||.|||||||||||||||||||||..||||||||||.||||||||||||||||||||||||||||||||
Sbjct 571 ATGGAGACGCTGACATGGCCTAATGCAGATACCAAGAAGCGGATTCGAATGGACAGTTACACCAGTTACTGCAA 644
Query 1407 TGCTGTGTCTGACCTTCACTCAGCATCTGAGATAGACATGAGTGTCAAGGCAGAGATGGGTCTAGGTGACAGAA 1480
|||.|||||||||||||||||.|..||||||||.|||||||||||.|||||.||||||||.||.||||||||||
Sbjct 645 TGCCGTGTCTGACCTTCACTCCGAGTCTGAGATGGACATGAGTGTGAAGGCTGAGATGGGCCTGGGTGACAGAA 718
Query 1481 AAGGAAGTAATGGCTCTCTAGAAGAATGGTATGACCAGGATAAGCCTGAAGTCTCTCTCCTCTTCCAGTTCCTG 1554
|||||||.|.|||||||||.||||||||||||||||||||||||||||||||.||.||.|||||||||||||||
Sbjct 719 AAGGAAGCAGTGGCTCTCTTGAAGAATGGTATGACCAGGATAAGCCTGAAGTGTCCCTTCTCTTCCAGTTCCTG 792
Query 1555 CAGATCCTTACAGCCTGCTTTGGGTCATTCGCCCATGGTGGCAATGACGTAAGCAATGCCATTGGGCCTCTGGT 1628
|||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||.||.||||||||
Sbjct 793 CAGATCCTTACAGCCTGCTTTGGGTCATTTGCCCATGGTGGCAATGACGTCAGCAATGCCATCGGCCCTCTGGT 866
Query 1629 TGCTTTATATTTGGTTTATGACACAGGAGATGTTTCTTCAAAAGTGGCAACACCAATATGGCTTCTACTCTATG 1702
||||||.|||.|.|||||| |.||| |||.|..|||.||||||.|||||||||.|||||||||||.||.||||
Sbjct 867 TGCTTTGTATCTTGTTTAT-AAACA--AGAAGCCTCTACAAAAGCGGCAACACCCATATGGCTTCTGCTTTATG 937
Query 1703 GTGGTGTTGGTATCTGTGTTGGTCTGTGGGTTTGGGGAAGAAGAGTTATCCAGACCATGGGGAAGGATCTGACA 1776
||||||||||.||.||..|.||.||||||||||||||||||||||||||||||||||||||||||||.|||||.
Sbjct 938 GTGGTGTTGGCATTTGCATGGGCCTGTGGGTTTGGGGAAGAAGAGTTATCCAGACCATGGGGAAGGACCTGACC 1011
Query 1777 CCGATCACACCCTCTAGTGGCTTCAGTATTGAACTGGCATCTGCCCTCACTGTGGTGATTGCATCAAATATTGG 1850
||.|||||||||||.|||||.|||||||||||||||||.||||||.|.||||||||.||.||||||||.|||||
Sbjct 1012 CCAATCACACCCTCCAGTGGTTTCAGTATTGAACTGGCGTCTGCCTTAACTGTGGTCATCGCATCAAACATTGG 1085
Query 1851 CCTTCCCATCAGTACAACACATTGTAAAGTGGGCTCTGTTGTGTCTGTTGGCTGGCTCCGGTCCAAGAAGGCTG 1924
||||||||||||.|||||||||||.|||||||||||||||||||||||||||||||||||.||.||||||||||
Sbjct 1086 CCTTCCCATCAGCACAACACATTGCAAAGTGGGCTCTGTTGTGTCTGTTGGCTGGCTCCGATCAAAGAAGGCTG 1159
Query 1925 TTGACTGGCGTCTCTTTCGTAACATTTTTATGGCCTGGTTTGTCACAGTCCCCATTTCTGGAGTTATCAGTGCT 1998
||||||||||.||.|||||.||||||||||||||||||||||||||.||||||||.|||||.|||||||||||.
Sbjct 1160 TTGACTGGCGACTGTTTCGAAACATTTTTATGGCCTGGTTTGTCACGGTCCCCATCTCTGGGGTTATCAGTGCC 1233
Query 1999 GCCATCATGGCAATCTTCAGATATGTCATCCT--CAGAATG 2037
||.|||||||||.|.||||..||..||||||| ||| ||
Sbjct 1234 GCTATCATGGCAGTATTCAAGTACATCATCCTGCCAG--TG 1272
