Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01697
- Subject:
- NR_105036.2
- Aligned Length:
- 4077
- Identities:
- 545
- Gaps:
- 3525
Alignment
Query 1 ----------------------------------------------------------------ATGGACCGCG 10
|.|.||.|.|
Sbjct 1 GCTTTGGGTGGAAAGCCGCGTGAAGGGAGCACGGCGCAGCCAGCTCCTGTAAGTGACTGGAACCAGGAACAGAG 74
Query 11 GCGAG------------------CAAGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGCT 66
|..|| |.|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GACAGTGAGTCGCTCTCGTCCCTCCAGGTCTGCTGAGAACAGACCCAGTCCCTGAGGAAGGAGAAGATGTTGCT 148
Query 67 GCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGA 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GCCACGATCAGTGCCACAGAGACCCTCTCGGAAGAGGAGCAGGAAGAGCTAAGAAGAGAACTTGCAAAGGTAGA 222
Query 141 AGAAGAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTG 214
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGAAGAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCATCTAGCAGAGATCAAGCGGAAACTTG 296
Query 215 GAATCAATTCTCTACAGGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTAC 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAATCAATTCTCTACAGGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGACGTGACAGCAACATCTGCTTAC 370
Query 289 AAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCAT 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGAAGACATCTGAAACCTTATCCCAGGCTGGACAGAAGGCCTCAGCTGCTTTTTCGTCTGTTGGCTCAGTCAT 444
Query 363 CACCAAAAAGCTGGAAGATGTAAA-------------------------------------------------- 386
||||||||||||||||||||||||
Sbjct 445 CACCAAAAAGCTGGAAGATGTAAAATTGCAAGCCTTTTCACATTCCTTTAGTATACGTTCCATTCAGCATTCAA 518
Query 387 -------------------AAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGTCTAAA 441
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TTAGCATGCCTGCTATGAGAAACTCCCCAACTTTTAAATCATTTGAAGAAAAGGTCGAAAACTTAAAGTCTAAA 592
Query 442 GTAGGGGGAACCAAGCCTGCTGGTGGTGATTTTGGAGAAGTCTTGAATTCGGCTGCAAATGCTAGTGCCACCAC 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTAGGGGGAACCAAGCCTGCTGGTGGTGATTTTGGAGAAGTCTTGAATTCGGCTGCAAATGCTAGTGCCACCAC 666
Query 516 CACGGAGCCTCTTCCAGAAAAGACACAGGAGAGCCTG------------------------------------- 552
|||||||||||||||||||||||||||||||||||||
Sbjct 667 CACGGAGCCTCTTCCAGAAAAGACACAGGAGAGCCTGTGAGATTCCTACCTTTGTTCTGCTACCCACTGCCAGA 740
Query 553 -------------------------------------------------------------------------- 552
Sbjct 741 TGCTGCAAGCGAGGTCCAAGCACATCTTGTCAACATGCATTGCCATGAATTTCTACCAGATGTGCTTTTATTTA 814
Query 553 -------------------------------------------------------------------------- 552
Sbjct 815 GCTTTACATATTCCTTTGACCAAATAGTTTGTGGGTTAAACAAAATGAAAATATCTTCACCTCTATTCTTGGGA 888
Query 553 -------------------------------------------------------------------------- 552
Sbjct 889 AACACCCTTTAGTGTACATTTATGTTCCTTTATTTAGGAAACACCATTATAAAAACACTTATAGTAAATGGGGA 962
Query 553 -------------------------------------------------------------------------- 552
Sbjct 963 CATTCACTATAATGATCTAAGAAGCTACAGATTGTCATAGTTGTTTTCCTGCTTTACAAAATTGCTCCAGATCT 1036
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1037 GGAATGCCAGTTTGACCTTTGTCTTCTATAATATTTCCTTTTTTTCCCCTCTTTGAATCTCTGTATATTTGATT 1110
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1111 CTTAACTAAAATTGTTCTCTTAAATATTCTGAATCCTGGTAATTAAAAGTTTGGGTGTATTTTCTTTACCTCCA 1184
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1185 AGGAAAGAACTACTAGCTACAAAAAATATTTTGGAATAAGCATTGTTTTGGTATAAGGTACATATTTTGGTTGA 1258
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1259 AGACACCAGACTGAAGTAAACAGCTGTGCATCCAATTTATTATAGTTTTGTAAGTAACAATATGTAATCAAACT 1332
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1333 TCTAGGTGACTTGAGAGTGGAACCTCCTATATCATTATTTAGCACCGTTTGTGACAGTAACCATTTCAGTGTAT 1406
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1407 TGTTTATTATACCACTTATATCAACTTATTTTTCACCAGGTTAAAATTTTAATTTCTACAAAATAACATTCTGA 1480
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1481 ATCAAGCACACTGTATGTTCAGTAGGTTGAACTATGAACACTGTCATCAATGTTCAGTTCAAAAGCCTGAAAGT 1554
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1555 TTAGATCTAGAAGCTGGTAAAAATGACAATATCAATCACATTAGGGGAACCATTGTTGTCTTCACTTAATCCAT 1628
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1629 TTAGCACTATTTAAAATAAGCACACCAAGTTATATGACTAATATAACTTGAAAATTTTTTATACTGAGGGGTTG 1702
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1703 GTGATAACTCTTGAGGATGTAATGCATTAATAAAAATCAACTCATCATTTTCTACTTGTTTTCAATGTGTTGGA 1776
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1777 AACTGTAAAATGATACTGTAGAACCTGTCTCCTACTTTGAAAACTGAATGTCAGGGCTGAGTGAATCAAAGTGT 1850
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1851 CTAGACATATTTGCATAGAGGCCAAGGTATTCTATTCTAATAACTGCTTACTCAACACTACCACCTTTTCCTTA 1924
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1925 TACTGTATATGATTATGGCCTACAATGTTGTATTTGTTATTTATTAAATTGTGATTGTTTTATTATTGTTTATG 1998
Query 553 -------------------------------------------------------------------------- 552
Sbjct 1999 CCAAATGTTAACTGCCAAGCTTGGAGTGACCTAAAGCATTTTTTAAAAGCATGGCTAGATTTACTTCAGTATAA 2072
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2073 ATTATCTTATGAAAACCAAATTTTAAAAGCCACAGGTGTTGATTGTTATAAAATAACATGCTGCCATTCTTGAT 2146
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2147 TGCTAGAGTTTTTGTTAGTACTTTGGATGCAATTAAAACTATGTGCTATCACATGTGAAAAGCTTAATAAATTC 2220
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2221 CATCTATCAGTAGTATAGGTCTCAATATTTATTATGAGACCAGTGGTCTGGAAACAGCTTGTTGTACCGAATCA 2294
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2295 ACTGGAGTCTATGCTTAAAAAAAAAAAATTTTTTTTTAACCATCCTTAAATTATTGCTTAATGGTATCATATTA 2368
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2369 ACATATTCTAAATAAGGGCTTTAAGGCACAGGCTGTTGAAGCATTTTCTCAGAGGAGTGGATCTGTAGAAGTCT 2442
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2443 GTCTTTCTATAGAAATATTGTGCTTACTCAAGTGTTAAATTATTTTTTCTATGAACTAGTCTACTTCTTAAAAT 2516
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2517 TCAAACATATTCTTTTGATCACATTGTTTCTTGAGCATCCTGCCCTGCTACTAACTTTTCAACAAGGCAAAATG 2590
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2591 GAGTAAAGTGGCAATTTCTTTAGATGAGTGAAATACCCTCAAGTCTCTTTTCTGCCCAAAAAGGGAAAAGTGAT 2664
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2665 AGAAATGGGGGTGGCAAGTGGGGTGAGTGGATGAAGGTGGGTATTGGGGGTGGCTGTGAAAGAAAATAATGGAG 2738
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2739 AATCACTTTTCTAGACATCTACCTATACTTAATCTAAGAAACAAAGTAATCTACTGTAAAGTACTCTGCCCCTT 2812
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2813 GAAAGAAGTATTAAAAAGAGTGAGGATGGATTTAGAAAAAAACATGAATTTAGAAATATTCAAAATGGTTTTTG 2886
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2887 TGGCAGATTCAATATTATGAATTCACAGATATTTAAAGAATGAGAAACATAGTAATTAGTAGAAATGCCAGAAA 2960
Query 553 -------------------------------------------------------------------------- 552
Sbjct 2961 CAGTTCCTGGTTCCTCTTGTGTTTGACACTAAGAAAATAGCAAGAGTGTGAAATCTCAGATACTTATGAAATCT 3034
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3035 CACAGATGTAAGGACTCAAGTGTAGAAGAAAATATCCCCTTCTTACAAAAAGAAATGTCAATTTATGGAGTTTG 3108
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3109 TGGGAAATAGGGCAAGAATTCTTATGCTTATGAGAGCCAAGTAGTCAGTGGAAGAGAGTAGAGCTCAAAACTGG 3182
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3183 ATTATCACCTTAGCAACTTAGAATAGTTTGAAATAGAAAAAAAGTATTTAATTTGGATCTGGATCTGTTAAGAT 3256
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3257 ATGCACAGTCTATTTTTTGTATAGTATTGGAAAATAAAAATGCTATAATTTGGGTATGGGTTCTTTTGTATACA 3330
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3331 TTACCTGCCCATTGAGGAAAGGGGCAAGTCCATTATGCAACTTCTCTCCAAACCCTTCATATTCTGGATATGAT 3404
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3405 ACTTAAAGAGCCATGAGCAGCTACATTCTGCCTATCAGAAGGCATTTATTAAATGACTGCTTGCTGAAGATGTG 3478
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3479 TCCAAAGAGATCCTACATTAAGGTCATTTGTCAGAATGATGTTTGTGTTTGTTTAGAGTTGGCTGACCTCCAAC 3552
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3553 TCCTGGGGTCAAGGAATCCTACTGCCTTAGCTTCCCAAATAGCTAGGACTATAGGCATGCACCCGGCCATGTGT 3626
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3627 TTTATTTATAGCTCTTAAAGCCCAGATGAAGAAATCACATTTTTGCCCATAGTGAAGAAACATTTGGCCATTGA 3700
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3701 TTAGTCCTTATTTTCAGTGACTGTCCTGTTTTCATTAGATTAGAGAGACCCTGTGTGGGCCACAGTTAATATAA 3774
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3775 ACCATTATCACTTTTAAGTAAACCTGCACATCTTAGATTTCATAATTTCCTTATTGTTCTGACTCAAAATGAAC 3848
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3849 TAAGAGCTTTTCACTTTTTGTTTGTAAGTTCTCAGAGAGTCGGGTCTGCAAGTGCTTTTGCCTGCCAGGATTTT 3922
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3923 GTACTCAAATAAATGCTATTTGGCAACTAAAATTCTTGCCAGCTCTCATGTAATTTTGATGTTACTGAGGTTGG 3996
Query 553 -------------------------------------------------------------------------- 552
Sbjct 3997 TTGGTAGTTTATTTTATTAATTTTGTGGTTCTTCTATCATATAGAAAAAGCCAAATACAGTTTTGTTTGAATAT 4070
Query 553 ------- 552
Sbjct 4071 TTGTAAA 4077
