Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_01898
Subject:
NR_160913.1
Aligned Length:
2439
Identities:
340
Gaps:
2061

Alignment

Query    1  -----------------------------------------------ATGCCCGAGCCCTCAAAGTCCGCTCCT  27
                                                           |||||.||.||..|.||.|||||||||
Sbjct    1  AGTTCGGATTACTTCTTTAAGTCTCTGTTCTCTTTTTTCGCGCAAAAATGCCGGATCCAGCGAAATCCGCTCCT  74

Query   28  GCCCCGAAGAAAGGCTCCAAGAAGGCAGTGACAAAGGCCCAGAAGAAGGACGGCAAGAAGCGCAAGCGCAGCCG  101
            ||.||.|||||.||||||||.|||||.||.||.||.|..|||||||||||||||.|||||||||||||||||||
Sbjct   75  GCTCCCAAGAAGGGCTCCAAAAAGGCTGTTACGAAAGTGCAGAAGAAGGACGGCGAGAAGCGCAAGCGCAGCCG  148

Query  102  CAAGGAGAGCTACTCCGTGTACGTGTACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGTATCTCGTCCAAGG  175
            ||||||||||||||||||.||||||||..|||||||||||||||||||||||||||||||.||||||||||||.
Sbjct  149  CAAGGAGAGCTACTCCGTTTACGTGTAGGAGGTGCTGAAGCAGGTCCACCCCGACACCGGCATCTCGTCCAAGA  222

Query  176  CCATGGGCATCATGAACTCCTTCGTCAATGACATCTTCGAGCGCATCGCCGGCGAGGCTTCCCGCCTGGCGCAT  249
            ||||||||||||||||||||||||||||.||||||||||||||||||||.||.|||||.||||||||||||||.
Sbjct  223  CCATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGAGAGGCGTCCCGCCTGGCGCAC  296

Query  250  TACAACAAGCGCTCGACCATCACCTCCAGGGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCAGGGGAGCTGGC  323
            ||||||||||||||.||||||||.|||.|.||||||||||||||||||||||||||||||||.||.||||||||
Sbjct  297  TACAACAAGCGCTCCACCATCACGTCCCGCGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGCGAGCTGGC  370

Query  324  CAAGCACGCGGTGTCGGAGGGCACCAAGGCCGTCACCAAGTACACCAGTTCCAAG-------------------  378
            |||||||||.|||||.||||||||||||||.|||||||||||||||||.||.|||                   
Sbjct  371  CAAGCACGCCGTGTCCGAGGGCACCAAGGCGGTCACCAAGTACACCAGCTCGAAGTTAATAGGACCCATCCTTT  444

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  445  GGAAGTAGGAAAGTGGCATAGAAGGAGAAGCTGAGTTAGAGATCACTCACCCACTTGCCCATCAACTGGAACTG  518

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  519  CAAGAGATCAGAGAATAAAGATATCAGTTGGTCCAAGGAAAATAATGAGGAAGAGAGAATTGGGGAGACAGAAT  592

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  593  TAATGTAGACTCTGAGGGATCAACTCAGATCTCTTGAGTTTCTATTTCTCTTTCTCAAAATCCAGTACTAACAG  666

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  667  AACTGAACAAGCTACAGGTGGTTATCAAGGAAACTTCACTGCGGTGCGTCCAGGCTTAATGCTACCTCAGGGTT  740

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  741  GCCCTTCCCATCCTTTTCATAAAATAAGCTCTAATAAACCGTGGAAGCACAGATACAAGTTGCTTCATACTCAT  814

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  815  GAGTTCTACCCAGAGTTACCACAGGAAGACAAAACTCTTGACTCACAACAGCCACAGCCTGTACCCTTCTAACT  888

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  889  GTCCCCTCTGAGTCCAACTTACCCCAAAGGAGCAGAGTTGTCAAGAACCACATGTTGTCTCCAAGCTGGTGGGA  962

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct  963  GCAGTGAAATCTGTAACATGCAAGATATTGAAGAGGTTCTGCTGGTGGCTCCAGAGCCAAATTAGAAAAGAGGA  1036

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1037  AGGAAATTGCCTTTTCTGACCATTTTCATCATGTTCCTTTTCTGGGAAATACATCTCAAATCCTTGAAACATGC  1110

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1111  TTTTCCCATGCTCATACCTGTTAGCCCATCTCTCCCAGTTTGAATCTCTGATTTTCAGGTTATGAACTCTCAGA  1184

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1185  ATCCAGGGAAAAGGCTAAAGTTGTGTTGACATTCTATTCTATTTTTACCCTCTACCGTTTCTGTTTCTTACGGT  1258

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1259  TAGAATATGGCAAAACCTCACTCTTTATAATTGGTTCAATGCCTGGCTAATGCCTCCAAACAATCATTTGAATC  1332

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1333  CAGAAGTATCTATATCAGCCTCTATGAGGCCATGGGAAAAGTTACTCATCTACAAGAGCTGCCCTAATACAAAC  1406

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1407  CAGCCTCTGCTCCTCTAGGGGACACAGACAGGATCAATCTCCCATTTTGGTTAAAAAAGAAAACAAACTCTCTT  1480

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1481  CCTGAAAGACATCATGAATTTGGAGTGTTTATTTTGGCTAAATCCAAGGTAATTAATTGTTTAATGTGGATGCT  1554

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1555  ATGGAGAAGAAAAATAACTCATGCACATGGATAACAATATCTTCAAGAAAAGAGTTTCAGAGTACAAGTGGGGA  1628

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1629  GCTCTGTGCCACCAAACTGAGGTGGCTCCTGAGACAGAGTTGTAACCCCATAAAAAGATTTTTAGGTATTGTGG  1702

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1703  TAAGAGAGAAAGAGAGCTAAATGGAAACTAGGATGAATTCAATGAGTGCAGAGAGACTTTGGCAATCTTACTAG  1776

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1777  CAGAGAATGAAAAATGATGACAAATCATGCTGTAGATTGGTGTACTGGCCCCAGTTTCTCACCGCTCCCTGAAT  1850

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1851  CTACACTCTCTCCACAGCCTCATGAGGGTACGTCTCTGACTCTTGACTGTGGCTCATCATGAGACTTTCATTGG  1924

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1925  CCAGCGAAATGTGAATGGAAATGACATGGTGCTAATTTCAAACTTAGCACTTAGGAAGCTTCACACATTATCTC  1998

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 1999  TCACCCTCTTGTTCTCCTGTGATTGCTGAGACAAGAACATTTTTTAGCTAGTCAGCCACCGTGCGAAACAGAGC  2072

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 2073  TGTCCTAGACATTGTGGCTTGAGGCAGAGCTGCCTCACCTGCCCTGCAAACTTGTAAGTGAGAACTAAATGCTT  2146

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 2147  ACCTTTATATGCTACTGAGATTTGAAGATTGCTGTACAAGCAAGAGCTGACTGACACAAATGAAAAGCAAGGAA  2220

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 2221  GAAAGGCCGGGAAGAACTCAGGGTGTTCTGAAGAGACGAGAGAAGCCTCAGCTTGTTAAAATTTATATTCAAAG  2294

Query  379  --------------------------------------------------------------------------  378
                                                                                      
Sbjct 2295  CCTATATCTGTAACTATTTTACTATTTTGTCTCCAAAGTTTTCTACTGTATGCATGTACCATAATTTATTTCAC  2368

Query  379  -----------------------------------------------------------------------  378
                                                                                   
Sbjct 2369  CAACTTCTCTTCATGAACATGTAGGTTATTTCTAATTTTTTACTGTGTGACCAGTAAAAAAGACTGCTTAC  2439

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