Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_01899
- Subject:
- NR_160940.1
- Aligned Length:
- 2195
- Identities:
- 331
- Gaps:
- 1820
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTATCAATGAGACAGCATGGCCCGTACTAAGCAGACTGCCCGCAAGTCGACCGGCGGCAAGGCCCCGAGGAAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGCTGGCTACCAAAGCGGCCCGCAAGAGCGCGCCGGCCACGGGCGGGGTGAAGAAGCCGCACCGCTACCGGCCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCACCGTGGCTCTGCGGGAGATCTGGCGCTACCAGAAGTCTACGGAGCTGCTGATCCGCAAGCTGCCCTTCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGCTGGTACGCGAGATCGCGCAGGACTTTAAGACGGACCTGCGCTTCCAGAGCTCGGCCGTGACGGCGCTGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGCAGGAGGCCAGCGAGGCCTACCTGGTGGGGCTGTTCGAAGACACGAACCTGTGCGCCATCCATGCCAAGC 370
Query 1 -----------ATGCCTGAA------CCAGT----------------------------------CAAATCTGC 23
||||| .|| ||||| .|||||.||
Sbjct 371 GCGTGACCATCATGCC-CAAGGACATCCAGTTGGTCAGCCGCATCCGCGGGGAGAGGGCCTAAGCGAAATCCGC 443
Query 24 TCCAG-TCCCTAAAAAAGGCTCCAAGAAGGCCATTAACAAG-GCTCAGAAGAAGGATGGAAAGAAGCGCAAACG 95
|||.| |||| ||.||.||||||||.|||||..|||| ||| |..|||||||||||.||..||||||||||.||
Sbjct 444 TCCTGCTCCC-AAGAAGGGCTCCAAAAAGGCTGTTAA-AAGAGTGCAGAAGAAGGACGGCGAGAAGCGCAAGCG 515
Query 96 CAGCCGCAAGGAGAGCTACTCTGTGTATGTGTACAAGGTGCTGAAGCAGGTCCACCCCGACACCGGCATCTCTT 169
|||||||||||||||||||||.||.||.|||||..|||||||||||||||||||||||||||||||||||||.|
Sbjct 516 CAGCCGCAAGGAGAGCTACTCCGTTTACGTGTAGGAGGTGCTGAAGCAGGTCCACCCCGACACCGGCATCTCGT 589
Query 170 CCAAGGCTATGGGAATCATGAACTCCTTCGTCAACGACATCTTTGAGCGTATCGCCGGAGAAGCGTCACGCCTG 243
|||||||.|||||.|||||||||||||||||||||||||||||.|||||.|||||.|||||.|||||.||||||
Sbjct 590 CCAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCGGGAGAGGCGTCCCGCCTG 663
Query 244 GCGCATTACAACAAGCGCTCGACCATCACTTCGAGGGAGATCCAGACGGCCGTGCGCCTACTGCTACCCGGGGA 317
|||||.||||||||||||||.||||||||.||..|.|||||||||||||||||||||||.|||||.|||||..|
Sbjct 664 GCGCACTACAACAAGCGCTCCACCATCACATCCCGTGAGATCCAGACGGCCGTGCGCCTGCTGCTGCCCGGCAA 737
Query 318 ATTGGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCCGTCACCAAGTATACCAGCTCCAAG------------- 378
..||||||||||||||||||||||||||||||||||.|||||||||||.||||||||.||.
Sbjct 738 GCTGGCCAAGCACGCCGTGTCCGAGGGCACCAAGGCGGTCACCAAGTACACCAGCTCGAACATTTTCTAGCTGA 811
Query 379 -------------------------------------------------------------------------- 378
Sbjct 812 AGTTACTGTTGTTGTCAACTACTCAGCATCCAAAATTTTCACAAGAAAACAAGGTTTTTTCTCTTCAAATTACA 885
Query 379 -------------------------------------------------------------------------- 378
Sbjct 886 GTCCAAAGAGTGGCAAACAAGAAAGATGACAGAGTCCGAAGACCTTAAGATTTCTTTTCTTTGGTCAAGAACTC 959
Query 379 -------------------------------------------------------------------------- 378
Sbjct 960 ATTACACAATGGATGATACATCTTAGGTGGTCCTACTAAAAAGAGACACAAGAATCTAGAGACTATCTCACTGT 1033
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1034 CAACCAATCCAAGGAACTTTGCTTTAGATGGCCAAAGCCAGAAACAGCAAAGTAGAAGAACTACTAGAGCTTTA 1107
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1108 AGCAGTTCCTTAGTATTTTTCCTTGGCTTATCCAAGCCTGGATACTGGTCCACTTTCCCAAAGTTGGTAAAGAG 1181
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1182 GTAATACAGCTTGGGATTGATTGGATATTGAGACAGAAAGAGAGGGGGAGAGAGAGATATCTAGGTACTGGAGC 1255
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1256 AGCACTAGGCACTCAGAAGAAGGAACACTTGGAGCAAAAAATGAAGGATATAGATTAGTGAAGTGAAGTCAGGA 1329
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1330 GCAAATGATCTCAGTTGCTTTACATGATCAAAGGACAATAACTGCAAATTGCCAGAGGGTAGGTGAAGCTCCAT 1403
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1404 ATCACTTTTTAATATTAGTGTTTTAAACACCTAGGAATAGAATATACCTAAAGATAATAGCTTGATTTCCCCAC 1477
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1478 ACCCACCTTTGCAATGTTTTGATTTTGCACAAGTCTTGGTTTCTAGTTTGTGGGATTATCATTTTTCATTGCAT 1551
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1552 TGAAGGAAAATTCTTTAGGCCAGGAGGGAGTCTAAGACTTCAGACACAGCACAGATACGATCCTGGGCAAGGGT 1625
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1626 CATTCAGTGTTCTTAAGAAAATTCTAAATCCTAAGGTGTGATGGTTAATATTAGGTGTCAACTTGATAGGATTA 1699
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1700 AAGGATGCCTAGATAGCTAAGTATTGTTTCTGGGTGTGTCTGTGAGGGTGTTGCCAGAGGAGATTAACATTTGA 1773
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1774 GTCAGTGGACCAGGAGAGGAAGACTCACCCTCAATGTGGGTTGGCACCATCCAGTCGGCTGCCAGGGTAGCTAC 1847
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1848 AACAAAGCAGGAGAGAGAAGGTGGGCTAAGCTGGCTTGCAGAGTTCTGGCTTTCATCCCTCTCCTGTGCTGGAT 1921
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1922 GCCTCCATCCATTCCTCCTGCCTTTGGACATCAGACTCCAGGTTGTTTGGCCTTTGGACTCTTGGACTTAACAC 1995
Query 379 -------------------------------------------------------------------------- 378
Sbjct 1996 CAGTGGCTTGCCTGGGGCTTTTGGGCCTTAGGCCACAGACTGAAGGCTGCACTATGGGCTTCCCTACTCTTGAG 2069
Query 379 -------------------------------------------------------------------------- 378
Sbjct 2070 GCTTTTGGACTCAGACTGAACCACTACTGGCTTCTTTCTTCCTCAGCTTGCAGACGGCCCACCGTAGGACATTG 2143
Query 379 ------------------------------------------------- 378
Sbjct 2144 CCTTGTAATCATGTGAGCCAATTCTCCTTAATAAACTCCTTTTAATATA 2192
