Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02021
- Subject:
- XR_001750577.2
- Aligned Length:
- 2739
- Identities:
- 1074
- Gaps:
- 1665
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGAAGACTGCCGTGGAACCTTCCCTACTGTAGAGGAAAGTGCTGACTTTAAGCAATTTCTGCAGTCACGCCTTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTCTTCTTTCCTTTCTCCCTCTCATTCATTCACTGACGCCGCAGCACTGATCAGCACAGACACAGAAGATGCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAAGGGACCAAAGGGAATAACCGCGGTTCTGAGGACCGTGACAAACACTCATCGTTGGGTGGGGCTCTAGTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGTCCGTTGGTGCCAATATTTTATAAGCGACGTTTTCAAACTATGTGAAGATCCTTTCTTTTCTTTTCTTTCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGACGGAATCTCGCTCTGTCGCCCGGGCTGGAGTGCAGTGGCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGATCTCGGCTCACTGCAACCTGCGCCTCCCAGGTTCACGCGATTCTCCTGCCTCAGTCTCCTGAGTTGCTGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTACGGGCGCCCATCACCACACCCGGCTAATTTTTTGTATCTTTAGTAGAGACGGAGTTTCAGTATGTTGGCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGACTGGTCTCGAACTCCTGACCTCAGGTGATCTGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTG 592
Query 1 ------------------------------------------------ATGATGGAGAAGTATGAAAAAATTGG 26
||||||||||||||||||||||||||
Sbjct 593 AGCCACCATTCTCGGCTGAAGATCCATTTTAAGAAGATTTATTCCTCTATGATGGAGAAGTATGAAAAAATTGG 666
Query 27 GAAAATTGGAGAAGGATCCTATGGAGTTGTTTTCAAATGTAGAAACAGGGACACGGGTCAGATTGTGGCCATCA 100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAAAATTGGAGAAGGATCCTATGGAGTTGTTTTCAAATGTAGAAACAGGGACACGGGTCAGATTGTGGCCATCA 740
Query 101 AGAAGTTTCTGGAATCAGAAGATGACCCTGTCATAAAGAAAATTGCCCTTCGGGAAATCCGAATGCTCAAGCAA 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGAAGTTTCTGGAATCAGAAGATGACCCTGTCATAAAGAAAATTGCCCTTCGGGAAATCCGAATGCTCAAGCAA 814
Query 175 CTCAAGCATCCCAACCTTGTTAACCTCCTGGAAGTCTTCAGGAGGAAACGGAGGCTTCACCTGGTGTTTGAATA 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTCAAGCATCCCAACCTTGTTAACCTCCTGGAAGTCTTCAGGAGGAAACGGAGGCTTCACCTGGTGTTTGAATA 888
Query 249 TTGTGACCACACAGTTCTCCATGAGTTGGACAGATACCAAAGAGGGGTACCAGAACATCTCGTGAAGAGCATAA 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTGTGACCACACAGTTCTCCATGAGTTGGACAGATACCAAAGAGGGGTACCAGAACATCTCGTGAAGAGCATAA 962
Query 323 CTTGGCAGACACTGCAAGCTGTAAATTTTTGCCATAAACACAATTGCATACATAGAGACGTGAAGCCAGAAAAT 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTTGGCAGACACTGCAAGCTGTAAATTTTTGCCATAAACACAATTGCATACATAGAGACGTGAAGCCAGAAAAT 1036
Query 397 ATCCTCATCACGAAACATTCCGTGATTAAGCTTTGTGACTTTGGATTTGCTCGGCTTTTGACTGGACCGAGTGA 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 ATCCTCATCACGAAACATTCCGTGATTAAGCTTTGTGACTTTGGATTTGCTCGGCTTTTGACTGGACCGAGTGA 1110
Query 471 CTACTATACAGACTACGTGGCTACCAGGTGGTACCGCTCCCCTGAGCTGCTGGTGGGGGACACGCAGTACGGCC 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CTACTATACAGACTACGTGGCTACCAGGTGGTACCGCTCCCCTGAGCTGCTGGTGGGGGACACGCAGTACGGCC 1184
Query 545 CCCCGGTGGATGTTTGGGCAATTGGCTGTGTCTTTGCTGAGCTGCTGTCAGGAGTGCCTCTGTGGCCAGGAAAA 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCCCGGTGGATGTTTGGGCAATTGGCTGTGTCTTTGCTGAGCTGCTGTCAGGAGTGCCTCTGTGGCCAGGAAAA 1258
Query 619 TCGGATGTGGATCAGCTGTATCTGATTAGGAAGACCTTGGGGGATCTCATTCCTAGGCACCAGCAAGTGTTTAG 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCGGATGTGGATCAGCTGTATCTGATTAGGAAGACCTTGGGGGATCTCATTCCTAGGCACCAGCAAGTGTTTAG 1332
Query 693 CACGAATCAGTACTTCAGTGGAGTGAAAATTCCAGACCCTGAAGATATGGAACCACTTGAATTAAAATTCCCAA 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CACGAATCAGTACTTCAGTGGAGTGAAAATTCCAGACCCTGAAGATATGGAACCACTTGAATTAAAATTCCCAA 1406
Query 767 ACATCTCTTATCCTGCCCTGGGGCTCCTAA-------------------------------------------- 796
||||||||||||||||||||||||||||||
Sbjct 1407 ACATCTCTTATCCTGCCCTGGGGCTCCTAAAGTTTCATCTTTCAAAGAAGAAAAAAATGACATTAATAAGTTAA 1480
Query 797 -------------------------------------------AGGGCTGTCTCCACATGGACCCTACTCAAAG 827
|||||||||||||||||||||||||||||||
Sbjct 1481 TACAATTTTGAAGAAGTAAGAAGAAGGAATTTTCTGTTCTTTTAGGGCTGTCTCCACATGGACCCTACTCAAAG 1554
Query 828 GCTGACATGTGAACAGCTGTTGCATCACCCATATTTTGAAAACATCAGAGAAATAGAGGATTTGGCAAAAGAAC 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GCTGACATGTGAACAGCTGTTGCATCACCCATATTTTGAAAACATCAGAGAAATAGAGGATTTGGCAAAAGAAC 1628
Query 902 ACAACAAACCAACAAGGAAGACCCTAAGAAAGAGCCGAAAGCACCACTGCTTTACAGAAACATC---------- 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ACAACAAACCAACAAGGAAGACCCTAAGAAAGAGCCGAAAGCACCACTGCTTTACAGAAACATCCAAGGTTATA 1702
Query 966 -------------------------------------------------------------------------- 965
Sbjct 1703 ATTTGAAATGATCTCCTACCTGCCACCTGGTACAGAGAGTTGGAATCTAGACTTGAGGATGGCAGTTGTGGCTT 1776
Query 966 -------------------------------------------------------------------------- 965
Sbjct 1777 TCAGCTCCAGCATCCTCATTCCAGCACTAGGAGACAGGTCATAGGATCTATCAACCAGGGCCCCAGGGACATCT 1850
Query 966 -------------------------------------------------------------------------- 965
Sbjct 1851 GTCTCCTGAAGCCCCCTCTCCCTGAATCCTAAAGGTGCCCTTGTCCTGCTGCTTCCTGATGCCACACAGGGGCC 1924
Query 966 ---------------------------------CAAGTTGCAGTACCTACCCCAGCTAACTGGCAGCAGCATCC 1006
|||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 AGGGTTTCCAGCCTGCATGAGCACAGGTCTCAACAAGTTGCAGTACCTACCCCAGCTAACTGGCAGCAGCATCC 1998
Query 1007 TTCCAGCTTTGGATAATAAGAAGTACTACTGTGATACCAAGAAACTTAACTACCGTTTTCCAAACATT------ 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TTCCAGCTTTGGATAATAAGAAGTACTACTGTGATACCAAGAAACTTAACTACCGTTTTCCAAACATTTAAAGG 2072
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2073 AGCTAGGAGACATGATTTTAAAAAAGGAATCAATAGATGCTTTGAAGAAAATAAAACTTATACAGTTGATTGAA 2146
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2147 AACAATTACAATGTTGAAAACACACCAGGAGAAAACATAAGCAAGAAACTGGGAGGCCAACTGGCAAGATATGA 2220
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2221 AGGGAAATTCCAGATCCAGTCTTCCATGCTTGATGATGGTGTCCAGAAAAGAAAAAACCTGTTTGGAGTTGCAC 2294
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2295 TTGTATTTCAGTTTATGTAAGTAGCCGAACTTATGGACAGAATATGAACTGTCCCATACCTCTGGCAAAACTAG 2368
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2369 ATGATATCAAAAAGATTTATGCTTCAGTTGTACCACATGCCACACAAGAAAAATGAACCACAAAATGCCCATAT 2442
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2443 ATATTTCCTCGGATCTCTGTTGCCTGAGTCCTATCTCCTGCCTCTCAGATTGTTTCAGCATCATATTTAAGATA 2516
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2517 GTTCTATTTCTTGAAATCAAAATGTTTAAAATCCCATTTCCTGCTTGCTCTATTTCTTGATTTTTATATTTTAA 2590
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2591 AACATTTTGAGGGTAACACTTAGGTTCAAAATATTTAAAAGCATATGAATTATCACAAAAGCTTGGTAATTTAT 2664
Query 1075 -------------------------------------------------------------------------- 1074
Sbjct 2665 AATTTAATTATATGTTTCCACATTTCATCCTTACTTTATCAGTAAAGGATACACCTTAGTCACTTTTGCAGGCA 2738
Query 1075 - 1074
Sbjct 2739 A 2739
