Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02087
- Subject:
- NR_136265.1
- Aligned Length:
- 2924
- Identities:
- 1517
- Gaps:
- 1407
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGACGCACTTCCTGTCAGTGACGCACTTCCCCTCTGCTGGGCGCGCGGTGGACGGTCTGAAAGGGAGTGTTC 74
Query 1 ------------------------------------ATGGCTTCCTCGCGAGCCTCTTCCACGCAGGCAACCAA 38
||||||||||||||||||||||||||||||||||||||
Sbjct 75 GGGTTTCGCTGGGGCCTCGCGGCTCCAGAGCCCAGCATGGCTTCCTCGCGAGCCTCTTCCACGCAGGCAACCAA 148
Query 39 AACTAAAGCACCCGACGACTTAGTTGCTCCGGTCGTGAAGAAACCACACATCTATTATGGAAGTTTGGAAGAGA 112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AACTAAAGCACCCGACGACTTAGTTGCTCCGGTCGTGAAGAAACCACACATCTATTATGGAAGTTTGGAAGAGA 222
Query 113 AGGAGAGGGAGCGTCTGGCCAAAGGAGAGTCTGGGATTTTGGGGAAAGACGGACTTAAAGCAGGGATCGAAGCT 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AGGAGAGGGAGCGTCTGGCCAAAGGAGAGTCTGGGATTTTGGGGAAAGACGGACTTAAAGCAGGGATCGAAGCT 296
Query 187 GGAAATATTAATATAACCTCTGGAGAAGTGTTTGAAATTGAAGAGCATATCAGCGAGCGACAGGCAGAAGTATT 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGAAATATTAATATAACCTCTGGAGAAGTGTTTGAAATTGAAGAGCATATCAGCGAGCGACAGGCAGAAGTATT 370
Query 261 GGCTGAGTTTGAGAGAAGGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCC 334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GGCTGAGTTTGAGAGAAGGAAGCGAGCCCGGCAGATCAATGTTTCCACAGATGACTCAGAGGTCAAAGCTTGCC 444
Query 335 TTAGAGCCTTGGGGGAACCCATCACACTTTTTGGAGAGGGTCCTGCTGAAAGAAGAGAAAGGTTAAGAAATATC 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TTAGAGCCTTGGGGGAACCCATCACACTTTTTGGAGAGGGTCCTGCTGAAAGAAGAGAAAGGTTAAGAAATATC 518
Query 409 CTCTCAGTTGTCGGTACTGATGCCTTGAAAAAGACCAAAAAGGATGATGAGAAGTCTAAAAAGTCCAAAGAAGA 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTCTCAGTTGTCGGTACTGATGCCTTGAAAAAGACCAAAAAGGATGATGAGAAGTCTAAAAAGTCCAAAGAAGA 592
Query 483 GTATCAGCAAACCTGGTATCATGAAGGACCAAATAGCTTGAAGGTGGCAAGACTATGGATTGCTAATTATTCGT 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GTATCAGCAAACCTGGTATCATGAAGGACCAAATAGCTTGAAGGTGGCAAGACTATGGATTGCTAATTATTCGT 666
Query 557 TGCCCAGGGCAATGAAACGCTTGGAAGAGGCCCGACTCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAG 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TGCCCAGGGCAATGAAACGCTTGGAAGAGGCCCGACTCCATAAGGAGATTCCTGAGACAACAAGGACCTCCCAG 740
Query 631 ATGCAAGAGCTGCACAAGTCTCTCCGGTCTTTGAATAATTTTTGCAGTCAGATTGGGGATGATCGGCCTATCTC 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ATGCAAGAGCTGCACAAGTCTCTCCGGTCTTTGAATAATTTTTGCAGTCAGATTGGGGATGATCGGCCTATCTC 814
Query 705 CTACTGTCACTTTAGTCCCAATTCCAAGATGCTGGCCACAGCTTGTTGGAGTGGGCTTTGCAAGCTCTGGTCTG 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CTACTGTCACTTTAGTCCCAATTCCAAGATGCTGGCCACAGCTTGTTGGAGTGGGCTTTGCAAGCTCTGGTCTG 888
Query 779 TTCCTGATTGCAACCTCCTTCACACTCTTCGAGGGCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAA 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TTCCTGATTGCAACCTCCTTCACACTCTTCGAGGGCATAACACAAATGTAGGAGCAATTGTATTCCATCCCAAA 962
Query 853 TCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAGCTTTGGAG 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TCCACTGTCTCCTTGGACCCAAAAGATGTCAACCTGGCCTCTTGTGCGGCTGATGGCTCTGTGAAGCTTTGGAG 1036
Query 927 TCTCGACAGTGATGAACCAGTGGCAGATATTGAAGGCCATACAGTGCGTGTGGCGCGGGTAATGTGGCATCCTT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TCTCGACAGTGATGAACCAGTGGCAGATATTGAAGGCCATACAGTGCGTGTGGCGCGGGTAATGTGGCATCCTT 1110
Query 1001 CAGGACGTTTCCTGGGCACCACCTGCTATGACCGTTCATGGCGCTTATGGGATTTGGAGGCTCAAGAGGAGATC 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 CAGGACGTTTCCTGGGCACCACCTGCTATGACCGTTCATGGCGCTTATGGGATTTGGAGGCTCAAGAGGAGATC 1184
Query 1075 CTGCATCAGGAAGGCCATAGCATGGGTGTGTATGACATTGCCTTCCATCAAGATGGCTCTTTGGCTGGCACTGG 1148
|||||||||||||||||||||| |||
Sbjct 1185 CTGCATCAGGAAGGCCATAGCA-------------------------------------------------TGG 1209
Query 1149 GGGACTGGATGCATTTGGTCGAGTTTGGGACCTACGCACAGGACGTTGTATCATGTTCTTAGAAGGCCACCTGA 1222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1210 GGGACTGGATGCATTTGGTCGAGTTTGGGACCTACGCACAGGACGTTGTATCATGTTCTTAGAAGGCCACCTGA 1283
Query 1223 AAGAAATCTATGGAATAAATTTCTCCCCCAATGGCTATCACATTGCAACCGGCAGTGGTGACAACACCTGCAAA 1296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1284 AAGAAATCTATGGAATAAATTTCTCCCCCAATGGCTATCACATTGCAACCGGCAGTGGTGACAACACCTGCAAA 1357
Query 1297 GTGTGGGACCTCCGACAGCGGCGTTGCGTCTACACCATCCCTGCTCATCAGAACTTAGTGACTGGTGTCAAGTT 1370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1358 GTGTGGGACCTCCGACAGCGGCGTTGCGTCTACACCATCCCTGCTCATCAGAACTTAGTGACTGGTGTCAAGTT 1431
Query 1371 TGAGCCTATCCATGGGAACTTCTTGCTTACTGGTGCCTATGATAACACAGCCAAGATCTGGACGCACCCAGGCT 1444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1432 TGAGCCTATCCATGGGAACTTCTTGCTTACTGGTGCCTATGATAACACAGCCAAGATCTGGACGCACCCAGGCT 1505
Query 1445 GGTCCCCGCTGAAGACTCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCTC 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1506 GGTCCCCGCTGAAGACTCTGGCTGGCCACGAAGGCAAAGTGATGGGCCTAGATATTTCTTCCGATGGGCAGCTC 1579
Query 1519 ATAGCCACTTGCTCATATGACAGGACCTTCAAGCTGTGGATGGCTGAA-------------------------- 1566
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1580 ATAGCCACTTGCTCATATGACAGGACCTTCAAGCTGTGGATGGCTGAATAGATGACAATGGGAAAAGGACTTGA 1653
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 1654 ACCTCAAGCTCTCTCTAAGGAGCTGTTTTCCTCAAACGAGAAGAATTGAAGTGTTTAGTTCTATCATGTTTTCT 1727
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 1728 GCCAATTACCATGCATAGACCCTCAGTAGAATTGGATTTCCATGTCAGCCCCCACTCCAGGAAGGCAGCCCAAT 1801
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 1802 CCCTAGGTGATGGGGAACCCCTCTCACGGTTGAAAATTTATTACCTTTTTACGCCCTGCCACGAACTGTGTAGA 1875
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 1876 CATTGTTTTTATTAATCTTTTGTTTGGCCGGGCGTGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCCG 1949
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 1950 AGGTGGGTAGATCGCTTGAGCTCAGGAGTTCAAGACGAGCCTGGGCAACATGGCAAATGCCGTCTCTGCAAAAA 2023
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 2024 AATACTAAAATTAGCTGGTCGCGGTGGCTTCTGCCTGTGATTCCGGCTACTTGGGAGGCTGAGGTGGGAGGGAT 2097
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 2098 TGCTTAAGCCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATTGCGCCATTGCACTCTAGCCTGTGTGACAGAGCA 2171
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 2172 AGACCCTGTCTCAAAAAAAAAAAAAATTTGTTCGAATGCCTTATAGCCTTCCTCACAGCACCCAGGATTGTGAC 2245
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 2246 TGACTCTGCATTTTTAATTCTTGAAACTTGGCTTTCCATAACATGGTACATGCTTCAGGACTACATATGACCCA 2319
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 2320 GAGAGCAAGGTGGCTGAACTATAGTCTGGAAGCCCTCAGGTAAAGAGGCACATCTCACCACTCATTGGTTAAAC 2393
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 2394 AATGCATCATAGCGAGCACTTTTCCTTTCCCTGGAGAATGGGATGTGAAGCAGTAGACCGCAGCCACGCCGATG 2467
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 2468 GTTATACAGTGAAGAAGACTTCACCTCTTCCTATTGAGTTTGCTTGGAATGCTGACAGCATCAGGCAACTCTGA 2541
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 2542 ACTGAACATTTGCTTTGTCAGAAAATATCTTTTTTTTTACTTTGAAGTTTGGCAACCTTCATGTTACCCCAAAG 2615
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 2616 CAAAACCATTGTGTCAGGAGTCAAACAAATGTTTAGAAAGCAAACATGACGTCTCTATTGTACAACCTCCTTTC 2689
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 2690 TCTTGGCTGTTTAAAGGATGTACTTCGTGTATTAAAGGGTACTTTATGTTGAAGTAACGAAAAAACCCTAATGG 2763
Query 1567 -------------------------------------------------------------------------- 1566
Sbjct 2764 GTGTTCCTAAACCTAAACCTTTTCTTTATTCCACATTTGCTACGGTAAAATCCTGTTACAAAACTACCCTATAA 2837
Query 1567 -------------------------------------- 1566
Sbjct 2838 AGAATTATTTTCTATAGTTAAGCATTTTCTGAATCCTA 2875
