Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02135
- Subject:
- NM_001305436.1
- Aligned Length:
- 1048
- Identities:
- 668
- Gaps:
- 269
Alignment
Query 1 ATGTCTTCCTTAAGTGGAAAAGTCCAAACCGTTTTGGGCCTTGTAGAGCCAAGCAAACTGGGCCGTACCCTGAC 74
|||||||||||||||||.|||||.|||||.|||.|||||||||||||.||.|||.|||||||.||.||||||||
Sbjct 1 ATGTCTTCCTTAAGTGGGAAAGTACAAACAGTTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTGAC 74
Query 75 CCATGAACACCTGGCCATGACCTTTGACTGCTGTTACTGTCCACCTCCCCCGTGCCAGGAAGCTATTTCCAAAG 148
|||.||.||.|||.|.||||||||||||.|.|.||||||.||||||||.||.|||||.||||..|..|||||.|
Sbjct 75 CCACGAGCATCTGACAATGACCTTTGACAGTTTTTACTGCCCACCTCCTCCATGCCACGAAGTCACCTCCAAGG 148
Query 149 AACCTATCGTGATGAAAAATTTATATTGGATTCAGAAAAACGCCTATTCCCATAAAGAAAACCTTCAATTAAAT 222
||||||||.|||||||||||.|||.||||||||||||||||.|||||||||||..|||.||||||||.||.|||
Sbjct 149 AACCTATCATGATGAAAAATCTATTTTGGATTCAGAAAAACCCCTATTCCCATCGAGAGAACCTTCAGTTGAAT 222
Query 223 CAGGAGACAGAAGCCATAAAGGAAGAACTGTTGTATTTTAAAGCTAATGGTGGAGGGGCTTTGGTGGAAAACAC 296
||||||..||.||||||||..|||||.|||||||||||.||.|||||.||.|||||.||.||||||||.||.||
Sbjct 223 CAGGAGGTAGGAGCCATAAGAGAAGAGCTGTTGTATTTCAAGGCTAAGGGCGGAGGAGCCTTGGTGGAGAATAC 296
Query 297 AACCACTGGGATTAGCCGAGACACACAGACGTTGAAGAGGCTTGCAGAAGAGACTGGCGTCCATATCATATCTG 370
.||.||||||.|.|||.|.|||...||.|||.|||||.||||.|||||..|||||||.|||||.||||||.|||
Sbjct 297 GACAACTGGGCTCAGCAGGGACGTGCATACGCTGAAGTGGCTGGCAGAGCAGACTGGAGTCCACATCATAGCTG 370
Query 371 GAGCCGGGTTTTATGTGGATGCAACTCACTCCTCAGAGACCAGGGCCATGTCAGTGGAGCAGCTTACCGATGTC 444
||||.|||||||||||.||||||||||||||..|||..|||||.|||||||||||||||||||||||.||||||
Sbjct 371 GAGCTGGGTTTTATGTTGATGCAACTCACTCTGCAGCAACCAGAGCCATGTCAGTGGAGCAGCTTACAGATGTC 444
Query 445 CTTATGAATGAAATTCTCCATGGAGCTGATGGAACCAGTATCAAGTGTGGCATTATTGGAGAAATTGGTTGCTC 518
|||||.||||||||||||||||||||||||||.|||||.|||||||||||..||||||||||||||||.|||||
Sbjct 445 CTTATTAATGAAATTCTCCATGGAGCTGATGGCACCAGCATCAAGTGTGGAGTTATTGGAGAAATTGGCTGCTC 518
Query 519 CTGGCCTTTGACTGAGAGTGAAAGAAAGGTTCTCCAGGCCACAGCTCATGCCCAGGCTCAGCTTGGTTGTCCTG 592
|||||||||||||||.||.||.||||||.|.||..||||.||||||||.|||||||||||||||||.|||||||
Sbjct 519 CTGGCCTTTGACTGACAGCGAGAGAAAGATACTTGAGGCTACAGCTCACGCCCAGGCTCAGCTTGGCTGTCCTG 592
Query 593 TTATTATCCATCCTGGACGGAGCTCCAGG-GCACCATTTCAGATTATCCGAATATTGCAAGAAGCAGGCGCAGA 665
|.||.||||||||||||||||.| ||||| ||||||||.|||||.|||||.|||.|||||||||||||.|||||
Sbjct 593 TCATCATCCATCCTGGACGGAAC-CCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAAGCAGGAGCAGA 665
Query 666 CATCTCCAAAACAGTCATGTCACACCTGGATAGGACTATTCTTGATAAGAAAGAGCTCTTGGAGTTTGCTCAAC 739
|||||||||||||||||||||.|||||.||.||||||||..||||||||||||||||..|||||||||||||||
Sbjct 666 CATCTCCAAAACAGTCATGTCCCACCTTGACAGGACTATATTTGATAAGAAAGAGCTGCTGGAGTTTGCTCAAC 739
Query 740 TTGGCTGCTACTTGGAATATGATCTCTTTGGTACTGAACTACTTCATTACCAACTCGGCCCAGATATTGACATG 813
|||||||||||||||||||.||||||||||| .|.||||..|
Sbjct 740 TTGGCTGCTACTTGGAATACGATCTCTTTGG----------GTCCATTTTC----------------------- 780
Query 814 CCTGATGATAACAAAAGAATTAGAAGGGTGCGTCTCCTGGTGGAAGAGGGCTGTGAAGATCGAATTCTGGTAGC 887
Sbjct 781 -------------------------------------------------------------------------- 780
Query 888 ACATGACATACATACGAAAACCCGGCTGATGAAATATGGAGGTCACGGCTATTCTCATATACTCACCAATGTTG 961
Sbjct 781 -------------------------------------------------------------------------- 780
Query 962 TTCCTAAAATGTTGCTGAGAGGCATAACTGAGAATGTGCTTGATAAGATTCTAATAGAGAACCCTAAGCAATGG 1035
Sbjct 781 -------------------------------------------------------------------------- 780
Query 1036 CTAACTTTCAAA 1047
Sbjct 781 ------------ 780