Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02173
- Subject:
- NR_104402.1
- Aligned Length:
- 2965
- Identities:
- 730
- Gaps:
- 2235
Alignment
Query 1 ----------------------------------------------------------ATGACAGATGACAAAG 16
||||||||||||||||
Sbjct 1 TTTGGCTTTGGTTGAAATAAGAATTTAGCCTGTATGTACTGCTTTAACTCCTGGAAGAATGACAGATGACAAAG 74
Query 17 ATGTGCTTCGAGATGTGTGGTTTGGACGAATTCCAACTTGTTTCACGCTATATCAGGATGAGATAACTGAAAGG 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 ATGTGCTTCGAGATGTGTGGTTTGGACGAATTCCAACTTGTTTCACGCTATATCAGGATGAGATAACTGAAAGG 148
Query 91 GAAGCAGAACCATACTATTTGCTTTTGCCAAGAGTAAGTTATTTGACGTTGGTAACTGACAAAGTGAAAAAGCA 164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GAAGCAGAACCATACTATTTGCTTTTGCCAAGAGTAAGTTATTTGACGTTGGTAACTGACAAAGTGAAAAAGCA 222
Query 165 CTTTCAGAAGGTTATGAGACAAGAAGACATTAGTGAGATATGGTTTGAATATGAAGGCACACCACTGAAATGGC 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CTTTCAGAAGGTTATGAGACAAGAAGACATTAGTGAGATATGGTTTGAATATGAAGGCACACCACTGAAATGGC 296
Query 239 ATTATCCAATTGGTTTGCTATTTGATCTTCTTGCATCAAGTTCAGCTCTTCCTTGGAACATCACAGTACATTTT 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATTATCCAATTGGTTTGCTATTTGATCTTCTTGCATCAAGTTCAGCTCTTCCTTGGAACATCACAGTACATTTT 370
Query 313 AAGAGTTTTCCAGAAAAAGACCTTCTGCACTGTCCATCTAAGGATGCAATTGAAGCTCATTTTATGTCATGTAT 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAGAGTTTTCCAGAAAAAGACCTTCTGCACTGTCCATCTAAGGATGCAATTGAAGCTCATTTTATGTCATGTAT 444
Query 387 GAAAGAAGCTGATGCTTTAAAACATAAAAGTCAAGTAATCAATGAAATGCAGAAAAAAGATCACAAGCAACTCT 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAAAGAAGCTGATGCTTTAAAACATAAAAGTCAAGTAATCAATGAAATGCAGAAAAAAGATCACAAGCAACTCT 518
Query 461 GGATGGGATTGCAAAATGACAGATTTGACCAGTTTTGGGCCATCAATCGGAAACTCATGGAATATCCTGCAGAA 534
|||||||||||||||||
Sbjct 519 GGATGGGATTGCAAAAT--------------------------------------------------------- 535
Query 535 GAAAATGGATTTCGTTATATCCCCTTTAGAATATATCAGACAACGACTGAAAGACCTTTCATTCAGAAGCTGTT 608
||||||||||||||||||||||||||||||||||||
Sbjct 536 --------------------------------------GACAACGACTGAAAGACCTTTCATTCAGAAGCTGTT 571
Query 609 TCGTCCTGTGGCTGCAGATGGACAGTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTG 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 572 TCGTCCTGTGGCTGCAGATGGACAGTTGCACACACTAGGAGATCTCCTCAAAGAAGTTTGTCCTTCTGCTATTG 645
Query 683 ATCCTGAAGATGGGGAAAAAAAGAATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGCAG 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 646 ATCCTGAAGATGGGGAAAAAAAGAATCAAGTGATGATTCATGGAATTGAGCCAATGTTGGAAACACCTCTGCAG 719
Query 757 TGGCTGAGTGAACATCTGAGCTACCCGGATAATTTTCTTCATATTAGTATCATCCCACAGCCAACAGAT----- 825
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TGGCTGAGTGAACATCTGAGCTACCCGGATAATTTTCTTCATATTAGTATCATCCCACAGCCAACAGATTGAAG 793
Query 826 -------------------------------------------------------------------------- 825
Sbjct 794 GATCAACTATTTGCCTGAACAGAATCATCCTTAAATGGGATTTATCAGAGCATGTCACCCTTTTGCTTCAATCA 867
Query 826 -------------------------------------------------------------------------- 825
Sbjct 868 GGTTTGGTGGAGGCAACCTGACCAGAAACACTTCGCTGCTGCAAGCCAGACAGGAAAAAGATTCCATGTCAGAT 941
Query 826 -------------------------------------------------------------------------- 825
Sbjct 942 AAGGCAACTGGGCTGGTCTTACTTTGCATCACCTCTGCTTTCCTCCACTGCCATCATTAAACCTCAGCTGTGAC 1015
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1016 ATGAAAGACTTACCGGACCACTGAAGGTCTTCTGTAAAATATAATGAAGCTGAAACCTTTGGCCTAAGAAGAAA 1089
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1090 ATGGAAGTATGTGCCACTCGATTTGTATTTCTGATTAACAAATAAACAGGGGTATTTCCTAAGGTGACCATGGT 1163
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1164 TGAACTTTAGCTCATGAAAGTGGAAACATTGGTTTAATTTTCAAGAGAATTAAGAAAGTAAAAGAGAAATTCTG 1237
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1238 TTATCAATAACTTGCAAGTAATTTTTTGTAAAAGATTGAATTACAGTAAACCCATCTTTCCTTAACGAAAATTT 1311
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1312 CCTATGTTTACAGTCTGTCTATTGGTATGCAATCTTGTAACTTTGATAATGAACAGTGAGAGATTTTTAAATAA 1385
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1386 AGCCTCTAAATATGTTTTGTCATTTAATAACATACAGTTTTGTCACTTTTCAAGTACTTTCTGACTCACATACA 1459
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1460 GTAGATCACTTTTTACTCTGTGTTACCATTTTGACTGGTCGTCATTGGCATGGGGTGGATATAGGGCATAGGAT 1533
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1534 TACTTGTCTCAGAAGCTGTCATAGAATTTCTTGCTGCCAATTAAAAAACCTGTGTTCTTTACACACTACACGTA 1607
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1608 TAAATATTGTAACTGTTCATCTTTGTTGTTTTATCACTGTAAGCCTGTCAAATCATAGTATCCTAAGCATCTGT 1681
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1682 AAATGCTAATTTTGCATTTTTGGAAAAACCCATTCCTTCCAAGCTAGTGTTTTTCATTGGCTCCAGGTCTAATT 1755
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1756 TTTCACTGTGGTCCCTGGCAGCCAGTCTTTTGAAGTTTAAAGATTACCTGTCTCTTGACTGCAGTACCTTTTCT 1829
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1830 TTAATTTTTACCAAAAATATCCAGAGGTTACTGGAGTTCTTATTCAATATAAGGAAAGTTTGCTGCACTTTATT 1903
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1904 ACCAAGCCTCTGGGATTTTACCAGTCAAACATATTTGTGCATTACATTTCATTTCTTGTGAGCTAGCTGGCTGT 1977
Query 826 -------------------------------------------------------------------------- 825
Sbjct 1978 CCATATTGAATGTTGACCCATTTGAGTACGCTAAAAGGCTTACAGTATCAGACACGATCATGGTTTTAGATCCC 2051
Query 826 -------------------------------------------------------------------------- 825
Sbjct 2052 ATAATAAAAATGAATGTTTTTCTTATAAAAAATTATACAAATGCTGAAGTGAGATTCTACTATTGTTCATTGCT 2125
Query 826 -------------------------------------------------------------------------- 825
Sbjct 2126 TCCTTTTCTTTTTCCTTTTGCGATTTTCACTGATTAATAGCACATTTCTTCACAAAATTAGATAAAGTTGGTCA 2199
Query 826 -------------------------------------------------------------------------- 825
Sbjct 2200 AAGACCAGATATTCTGGAATGGAAATTGTAAAGCTTAATCAAAAAGAATAGCCAGTACAGCATACAATCTCAGA 2273
Query 826 -------------------------------------------------------------------------- 825
Sbjct 2274 AACTTAGAAGCAAGTAGAAAATAATTGGTTGATGTAAACGAAAGTGCCATTTTAGTAAAGGCAGGAAAAAAATA 2347
Query 826 -------------------------------------------------------------------------- 825
Sbjct 2348 GCAATATTTGAGTTATGTAAGGATAAAAAATCCACTGACTTGTATTTTTGCACAAGAGGCTGGTCTGAATATGA 2421
Query 826 -------------------------------------------------------------------------- 825
Sbjct 2422 TTGTTCACATTAAGAGTGTTTATTCGTCGGTTCATTTTGGGGATTTTCCCCCTTGATGTTTTGACAGATTGAAG 2495
Query 826 -------------------------------------------------------------------------- 825
Sbjct 2496 TGAGCTTTAGTGAGCAAAAGGATCAGAATGCAGGGAACACTAAGCTGTGATGAAGAAAGTGTGGTAAAAAGCCA 2569
Query 826 -------------------------------------------------------------------------- 825
Sbjct 2570 GAGTAGTTTTATACAGACAAAACCAGTGTCAGGCCTTTGCAGTAGGCTTGAGTGAACTTCTGATCTAGATTTGA 2643
Query 826 -------------------------------------------------------------------------- 825
Sbjct 2644 AAGTAAATTTTATGAAGACATTGCCCATTTTTACTTCCTCATTCATTATTGTACCAGCATCATAGCTTTATTAC 2717
Query 826 -------------------------------------------------------------------------- 825
Sbjct 2718 TCTAATCCCAGGTAAGTCAAGCCTACAATGCCCTAGAGGAAGAGTAAAACCAGAAATTCATGCTGGCTTAAATA 2791
Query 826 -------------------------------------------------------------------------- 825
Sbjct 2792 ATCTATTTTTGTTTCTTTTCATTTGAATATTTAAATTTTATGGTTTATTAAAAAATTAAATAAAAAAAAAAAAA 2865
Query 826 ----- 825
Sbjct 2866 AAAAA 2870
