Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02259
- Subject:
- NR_038120.1
- Aligned Length:
- 3736
- Identities:
- 628
- Gaps:
- 3108
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAATAAATGAGCAGGAGTTTCCCTGAAATGGAGGCGCCCTTTGATTGGCTGATCTTTCCCCGACTCCTGCCAAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGAGCATCCCTGGGCTCCAGCTCCATAAACATAAGCAAAGCTACATGCTTATTCTTCTGGACTTGGAGTGTAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ACCATTTAAAGGTGTGCGGCGGGTCTCTGTTCACATGGCTCAACTGGAAACCTGTTTCATGAACAAGCTTACTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGAACCATCTGGTGGTATTCCAGCACATTGTTCTTCAGGGGGACGACTCTAAGTCGCTTTGTGGTGGCAGCAG 296
Query 1 ---------------------------------------------------ATGCAGGTGGTGAAGGAGCAGGT 23
|||||||||||||||||||||||
Sbjct 297 CTTAGAATCAGTATTTGTGGTTGGGAAAGATGGACTTACGGGAGCTTGGTAATGCAGGTGGTGAAGGAGCAGGT 370
Query 24 TATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACTGCAGAACCTGAGCTACACTG 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACCAGTTCAAGAGCAAACTGCAGAACCTGAGCTACACTG 444
Query 98 AGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGCCCGATTTTGGAACTAAAG 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 AGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAGGAAGATTTCCAGTCCCGCCCGATTTT---------- 508
Query 172 GAGAAGATTCAGCCAGAAATCTTAGAGCTGATCAAACAGCAACGCCTGAACCGCCTTGTGGAAGGGACCTGCTT 245
Sbjct 509 -------------------------------------------------------------------------- 508
Query 246 TAGGAAACTCAATGCCCGGCGGAGGCAAGACAAGTTTTGGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGC 319
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 509 -----------------------------ACAAGTTTTGGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGC 553
Query 320 ATTACGGAGACTTAGAAGAGAGTCCTCAGGGAGAAGTGCCCCACGATTCCTTGCAGGACAAACTGCCGGTGGCA 393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 554 ATTACGGAGACTTAGAAGAGAGTCCTCAGGGAGAAGTGCCCCACGATTCCTTGCAGGACAAACTGCCGGTGGCA 627
Query 394 GATATCAAAGCCGTGGTGACGGGAAAGGACTGCCCTCATATGAAAGAGAAAGGTGCCCTTAAACAAAACAAGGA 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 628 GATATCAAAGCCGTGGTGACGGGAAAGGACTGCCCTCATATGAAAGAGAAAGGTGCCCTTAAACAAAACAAGGA 701
Query 468 GGTGCTTGAACTCGCTTTCTCCATCTTGTATGACTCAAACTGCCAACTGAACTTCATCGCTCCTGACAAGCATG 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 702 GGTGCTTGAACTCGCTTTCTCCATCTTGTATGACTCAAACTGCCAACTGAACTTCATCGCTCCTGACAAGCATG 775
Query 542 AGTACTGTATCTGGACGGATGGACTGAATGCGCTACTCGGGAAGGACATGATGAGCGACCTGACGCGGAATGAC 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 AGTACTGTATCTGGACGGATGGACTGAATGCGCTACTCGGGAAGGACATGATGAGCGACCTGACGCGGAATGAC 849
Query 616 CTGGACACCCTGCTCAGCATGGAAATCAAGCTCCGCCTCCTGGACCTGGAAAACATCCAGATCCCTGACGCACC 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 850 CTGGACACCCTGCTCAGCATGGAAATCAAGCTCCGCCTCCTGGACCTGGAAAACATCCAGATCCCTGACGCACC 923
Query 690 TCCGCCGATTCCCAAGGAGCCCAGCAACTATGACTTCGTCTATGACTGTAAC---------------------- 741
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 924 TCCGCCGATTCCCAAGGAGCCCAGCAACTATGACTTCGTCTATGACTGTAACTGAAGTGGCCGGGCCCAGACAT 997
Query 742 -------------------------------------------------------------------------- 741
Sbjct 998 GCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAGAGGAATGAAAACACACCCACGCCTTGGAACCGTCCT 1071
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1072 TTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGCATCACCTCTAGCCCTGGCAACTTTCAGCCCCTAGCT 1145
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1146 GGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTCCACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCAC 1219
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1220 TGGTGGGACAAGAGCAAAGCCCACTGCCAGTAAGAAGGCCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCAT 1293
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1294 GCCCTTCCTTCCCTTGGGCAGGAAAGCCAGCAGCCCCAGACTGCCCAAAAACTTGCCCACCAGACCAAGGGCAG 1367
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1368 TGCCCCAAGGCCCCTGTCTGGAGGAAATGGCCTAGCTATTTGATGAGAAGACCAAACCCCACATCCTCCTTTCC 1441
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1442 CCTCTCTCTAGAATCATCTCGCACCACCAGTTACACTTGAATTAAGATCTGCGCTCAAATCTCCTCCCACCTCT 1515
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1516 CTCCCTGCTTTTGCCTTGCTCTGTTCCTCTTTGGTCCCAAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCT 1589
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1590 AGCATAAATTTCCCAAACAGTCCACAGGTCCCATGCCCACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCC 1663
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1664 CTCCTCACCAGCTAGTCTGGGGTTTCCTCTCCCTGCCCCAGGCCAGAACTGCCTTCTTCATTTCCACCCACGCT 1737
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1738 CCCAGCCTCTTAGCTGAAAGCACAAATGGTGAAATCAGTAGTCTCGCTCCATCTCTAATAGACTAAACCTAAAT 1811
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1812 GCCTCTAGGACGGACTGTTGCTATCCAAGCGTTTGGTGTTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGT 1885
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1886 TCCACAGGATGGTCAAGCTGTCAGACATCCAAGTTTACATCATTGTAATTATTACTGGTATTTACAATTTGCAA 1959
Query 742 -------------------------------------------------------------------------- 741
Sbjct 1960 GAGTTTTGGGTTAGTTTTTTTTTTTTTTTTTGCTTTGTTTTTGTACAAAAGAGTCTAACATTTTTTGCCAAACA 2033
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2034 GATATATATTTAATGAAAAGAAGAGATACATAAATGTGTGAATTTCCAGTTTTTTTTTAATTATTTTAATCCCA 2107
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2108 AACATCTTCCTGAAAATAACATTCCCTTAAACATGCTGTGGAATAAAATGGATTGTGATGATTTGGGGAGCTGG 2181
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2182 TGTTTTGATTTAGTAACTTAGGTTCTTGCTACTCAGTCATCAGCATCACCTGGGAGCTTGTTGGAGATGCCAGC 2255
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2256 TCTTCAGCTCCACCCTAGACCTGCTGAATTGGGTGATGTTTATGTACATTGGTTTGAAAAACACTGCTGTGGGA 2329
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2330 AACCCTCCACCATTGCTAGGTCACCATAGGCTCTGAGCATCAGTGGAGAATGTTACTTCTAAGAAGACCATCTC 2403
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2404 GACTCACTGAGAAAATCAGACCCACTGTATGAAAATATCTATTCCTTTTACATTGCTGTCTCTTGACCATGACT 2477
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2478 TTCTCTTTTTTCTTTCTTACCATGATATAATTTATAGAATGGGTCTAATTAAAGACATCACAACTTTGAGGGAG 2551
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2552 CACATTTAGCAATGAAAAGAATGCATACCCACAGACCTGAAATAAGCCAGAACTAAATAAATCTAACCGTGGGT 2625
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2626 TAATAAATTATAGGTCAGAGCCCAGCGAAGGATGTTTCTTAAGTCATTTGCACTGGAGGCATTATCAGGATTGT 2699
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2700 AAACTCCCAGCACTGGGAGGGATGTCAGAAGGGTCCAAGCATGCAGTATTAAGCGTGGCACAGCACCAGCCACT 2773
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2774 CTGGCCTCACAGCACAAGCTGTGGAAGCATCCAGGTCATTTCTCTTTACCGTCATCAGGATGTGCAATTACAGA 2847
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2848 TTGACCTGGGTTGAGATGATATGGTCCAGAGCACTGCATGCATTGCAGGAAAAAAGTCCTTTGCATTCACAGGG 2921
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2922 GTTCCTTCTTCCCATCAGAGCACTCACACCTGTGTCAAGCTGTTAATTCCTTGATCATTAAGCTTCGATGTTAT 2995
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2996 TAACATGTACTTGCTATCAGGAGCAGTTATTAATCTACCCATCATCATGATAAAACAGTAAGTGTTAGGTCAAA 3069
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3070 GGCAGCAAACAAAGTCATATTATTTTTTTCTTATGGGTTACAAGATCCAATCCATGAAAAAGGGAACTTTCTGG 3143
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3144 ACCAGGATCTCTGAGGTCCTGAGACACTGGGTTTAAGAAATGTATCTGTCCTGTGACCTTGGTTGGGGAGATCC 3217
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3218 AGCCCCTCTCTCTTCTGGCACTCCAGCTTTGGTGCATTTAATAGAAAGAAACCTTTTCAGGACTATGAAAGGCA 3291
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3292 GCATTCTCCAGCTCCTCCCTAGACCCTCCTTTGGACCTGTGAGATCTGAAGAGTATGCCATCTGTTTCCATTCA 3365
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3366 TTTTGTGACCATGTGGGGAAGGATTGTTGCCCATATTTGGCCACCTCACCTTCTCTCTCCAGGCTGCCCAAGGC 3439
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3440 TTTTTTTCCCATGCAATGAGCCTACCACCTCCAACTCATCTCCTGTTGCCTGCAGTTTCCTAAGCCTGGGCAAC 3513
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3514 TCAGCCAAATCCAAGGCAGAAGTAAAGTAGGAAGACTGATGTTGTCGTGAAGTCCAAGTTGCATTCTGCTATTC 3587
Query 742 ------------------------------------ 741
Sbjct 3588 ATATTACTCAAAATAAAACTGATTACTTAATTTGAA 3623
