Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02259
- Subject:
- XR_001744894.2
- Aligned Length:
- 3724
- Identities:
- 628
- Gaps:
- 3096
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGATGCAAAATGTGTCTCTGGCCAGCAGGAGGAAGGAAGAGGAAGTGAGAGCAGCGGCAGCCGGCGGTGCAGCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCGGCCGACCCAGAGTGTAAGTGCGTGTGCTGGGGCGAGCGGGAGCGGGCGAGGATGGGCACAGGATAGAGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAGCCACCCACGCCGCCGCGGCCCCACGCTGGGCGACAGAGCCTCCAGTTCCCCTTCAATGGTGGCGGGTCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGAGCTCTGATCGCCGGGAACCCTTGCCGCTGCTGTCCTGCGACCCCAAGCAGGTATAGACACGTGTGGCCGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTACGCTGTAGGATCCTCATTCCCACTGGCTTTGAACATTTTGGGGACTTACAATGCCGCCACCCGCGGACATC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTCAAGGTGGCCATAGAATGGCCGGGCGCCTACCCCAAACTCATGGAAATTGATCAGAAAAAACCACTGTCTGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATAATAAAGGAAGTCTGTGATGGGTGGTCTCTTGCCAACCATGAATATTTTGCACTCCAGCATGCCGATAGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAACTTCTATATCACAGAAAAGAACCGCAATGAGATAAAAAATGGCACTATCCTTCGATTAACCACATCTCCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCTCAGAACGCCCAGCAGCTCCATGAACGAATCCAGTCCTCGAGTATGGATGCCAAGCTGGAAGCCCTGAAGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTTGGCCAGCCTCTCCCGGGATGTCACGTTTGCCCAGGAGTTTATAAACCTGGACGGTATCTCTCTCCTCACGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGATGGTGGAGAGCGGCACTGAGCGATACCAGAAATTGCAGAAGATCATGAAGCCTTGCTTTGGAGACATGCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCCTTCACCCTGACGGCCTTCGTTGAGCTGATGGACCATGGCATAGTGTCCTGGGATACATTTTCGGTGGCGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATTAAGAAGATAGCAAGTTTTGTGAACAAGTCAGCCATAGACATCTCGATCCTGCAGCGGTCCTTGGCCATTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGGAGTCGATGGTGCTCAATAGCCATGACCTCTACCAGAAAGTGGCGCAGGAGATCACCATCGGCCAGCTCATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCACACCTGCAAGGGTCAGATCAAGAAATCCAAACCTATACTATTGCAGTGATTAATGCGCTTTTCCTGAAGGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCCTGATGAGAGGAGGCAGGAGATGGCGAATATTTTGGCTCAGAAGCAACTGCGTTCCATCATTTTAACACATG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCATCCGAGCCCAGCGGGCCATCAACAATGAGATGGCGCACCAGCTGTATGTTCTACAAGTGCTCACCTTTAAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTCCTGGAAGACAGGATGATGACCAAAATGGACCCCCAGGACCAGGCTCAGAGGGACATCATATTTGAACTTCG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGAATTGCTTTTGATGCTGAGTCTGAACCTAACAACAGCAGTGGCAGCATGGAGAAACGCAAGTCCATGTACA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGCGAGATTATAAGAAGCTTGGGTTCATTAATCATGTCAACCCTGCCATGGACTTCACGCAGACTCCACCTGGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATGTTGGCTCTGGACAACATGCTGTACTTTGCCAAGCACCACCAAGATGCCTACATCCGGATTGTGCTTGAGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGTAGTCGAGAAGACAAGCATGAATGTCCCTTTGGCCGCAGTAGTATAGAGCTGACCAAGATGCTATGTGAGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCTTGAAAGTGGGCGAGTTGCCTAGTGAGACCTGCAACGACTTCCACCCGATGTTCTTCACCCACGACAGATCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTGAGGAGTTTTTCTGCATCTGTATCCAGCTCCTGAACAAGACATGGAAGGAAATGAGGGCAACTTCTGAAGA 1776
Query 1 -------------ATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACC 61
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTTCAACAAGGTAATGCAGGTGGTGAAGGAGCAGGTTATGAGAGCACTTACAACCAAGCCTAGCTCCCTGGACC 1850
Query 62 AGTTCAAGAGCAAACTGCAGAACCTGAGCTACACTGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAG 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 AGTTCAAGAGCAAACTGCAGAACCTGAGCTACACTGAGATCCTGAAAATCCGCCAGTCCGAGAGGATGAACCAG 1924
Query 136 GAAGATTTCCAGTCCCGCCCGATTTTGGAACTAAAGGAGAAGATTCAGCCAGAAATCTTAGAGCTGATCAAACA 209
||||||||||||||||||||||||||
Sbjct 1925 GAAGATTTCCAGTCCCGCCCGATTTT------------------------------------------------ 1950
Query 210 GCAACGCCTGAACCGCCTTGTGGAAGGGACCTGCTTTAGGAAACTCAATGCCCGGCGGAGGCAAGACAAGTTTT 283
|||||||||
Sbjct 1951 -----------------------------------------------------------------ACAAGTTTT 1959
Query 284 GGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGCATTACGGAGACTTAGAAGAGAGTCCTCAGGGAGAAGTG 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1960 GGTATTGTCGGCTTTCGCCAAATCACAAAGTCCTGCATTACGGAGACTTAGAAGAGAGTCCTCAGGGAGAAGTG 2033
Query 358 CCCCACGATTCCTTGCAGGACAAACTGCCGGTGGCAGATATCAAAGCCGTGGTGACGGGAAAGGACTGCCCTCA 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2034 CCCCACGATTCCTTGCAGGACAAACTGCCGGTGGCAGATATCAAAGCCGTGGTGACGGGAAAGGACTGCCCTCA 2107
Query 432 TATGAAAGAGAAAGGTGCCCTTAAACAAAACAAGGAGGTGCTTGAACTCGCTTTCTCCATCTTGTATGACTCAA 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2108 TATGAAAGAGAAAGGTGCCCTTAAACAAAACAAGGAGGTGCTTGAACTCGCTTTCTCCATCTTGTATGACTCAA 2181
Query 506 ACTGCCAACTGAACTTCATCGCTCCTGACAAGCATGAGTACTGTATCTGGACGGATGGACTGAATGCGCTACTC 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2182 ACTGCCAACTGAACTTCATCGCTCCTGACAAGCATGAGTACTGTATCTGGACGGATGGACTGAATGCGCTACTC 2255
Query 580 GGGAAGGACATGATGAGCGACCTGACGCGGAATGACCTGGACACCCTGCTCAGCATGGAAATCAAGCTCCGCCT 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2256 GGGAAGGACATGATGAGCGACCTGACGCGGAATGACCTGGACACCCTGCTCAGCATGGAAATCAAGCTCCGCCT 2329
Query 654 CCTGGACCTGGAAAACATCCAGATCCCTGACGCACCTCCGCCGATTCCCAAGGAGCCCAGCAACTATGACTTCG 727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2330 CCTGGACCTGGAAAACATCCAGATCCCTGACGCACCTCCGCCGATTCCCAAGGAGCCCAGCAACTATGACTTCG 2403
Query 728 TCTATGACTGTAAC------------------------------------------------------------ 741
||||||||||||||
Sbjct 2404 TCTATGACTGTAACTGAAGTGGCCGGGCCCAGACATGCCCCTTCCAAAACTGGAACACCTAGCTAACAGGAGAG 2477
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2478 AGGAATGAAAACACACCCACGCCTTGGAACCGTCCTTTGGTAAAGGGAAGCTGTGGGTCCACATTCCCTTCAGC 2551
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2552 ATCACCTCTAGCCCTGGCAACTTTCAGCCCCTAGCTGGCATCTTGCTCACCGCCCTGATTCTGTTCCTCGGCTC 2625
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2626 CACTGCTTCAGGTCACTTCCCATGGCTGCAGTCCACTGGTGGGACAAGAGCAAAGCCCACTGCCAGTAAGAAGG 2699
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2700 CCAAAGGGCCCTTCCATCCTAGCCCTCTGCAGGCATGCCCTTCCTTCCCTTGGGCAGGAAAGCCAGCAGCCCCA 2773
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2774 GACTGCCCAAAAACTTGCCCACCAGACCAAGGGCAGTGCCCCAAGGCCCCTGTCTGGAGGAAATGGCCTAGCTA 2847
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2848 TTTGATGAGAAGACCAAACCCCACATCCTCCTTTCCCCTCTCTCTAGAATCATCTCGCACCACCAGTTACACTT 2921
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2922 GAATTAAGATCTGCGCTCAAATCTCCTCCCACCTCTCTCCCTGCTTTTGCCTTGCTCTGTTCCTCTTTGGTCCC 2995
Query 742 -------------------------------------------------------------------------- 741
Sbjct 2996 AAGAGCAGCAGCCGCAGCCTCCTCGTGATCCTCCCTAGCATAAATTTCCCAAACAGTCCACAGGTCCCATGCCC 3069
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3070 ACTTTGCGTCTGCACTGTGATCGTGACAAATCTTCCCTCCTCACCAGCTAGTCTGGGGTTTCCTCTCCCTGCCC 3143
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3144 CAGGCCAGAACTGCCTTCTTCATTTCCACCCACGCTCCCAGCCTCTTAGCTGAAAGCACAAATGGTGAAATCAG 3217
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3218 TAGTCTCGCTCCATCTCTAATAGACTAAACCTAAATGCCTCTAGGACGGACTGTTGCTATCCAAGCGTTTGGTG 3291
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3292 TTACCTTCTCCTGGGAGGTCCTGCTGCAACTCAAGTTCCACAGGATGGTCAAGCTGTCAGACATCCAAGTTTAC 3365
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3366 ATCATTGTAATTATTACTGGTATTTACAATTTGCAAGAGTTTTGGGTTAGTTTTTTTTTTTTTTTTTGCTTTGT 3439
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3440 TTTTGTACAAAAGAGTCTAACATTTTTTGCCAAACAGATATATATTTAATGAAAAGAAGAGATACATAAATGTG 3513
Query 742 -------------------------------------------------------------------------- 741
Sbjct 3514 TGAATTTCCAGTTTTTTTTTAATTATTTTAATCCCAAACATCTTCCTGAAAATAACATTCCCTTAAACATGCTG 3587
Query 742 ------------------------ 741
Sbjct 3588 TGGAATAAAATGGATTGTGATGAT 3611
