Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02310
- Subject:
- NM_001198793.1
- Aligned Length:
- 1888
- Identities:
- 460
- Gaps:
- 1397
Alignment
Query 1 ATGACTGCCACTCTCCGCCCCTACCTGAGTGCCGTGCGGGCCACATTGCAGGCTGCCCTCTGCCTGGAGAACTT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGACTGCCACTCTCCGCCCCTACCTGAGTGCCGTGCGGGCCACATTGCAGGCTGCCCTCTGCCTGGAGAACTT 74
Query 75 CTCCTCCCAGGTTGTGGAACGACACAACAAGCCGGAAGTGGAAGTCAGGAGTAGCAAAGAGCTCCTGTTACAAC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTCCTCCCAGGTTGTGGAACGACACAACAAGCCGGAAGTGGAAGTCAGGAGTAGCAAAGAGCTCCTGTTACAAC 148
Query 149 CTGTGACCATCAGCAGGAATGAGAAGGAAAAGGTTCTGATTGAGGGCTCCATCAACTCTGTCCGGGTCAGCATT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CTGTGACCATCAGCAGGAATGAGAAGGAAAAGGTTCTGATTGAGGGCTCCATCAACTCTGTCCGGGTCAGCATT 222
Query 223 GCTGTGAAACAGGCTGATGAGATCGAGAAGATTTTGTGCCACAAGTTCATGCGCTTCATGATGATGCGAGCAGA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCTGTGAAACAGGCTGATGAGATCGAGAAGATTTTGTGCCACAAGTTCATGCGCTTCATGATGATGCGAGCAGA 296
Query 297 GAACTTCTTTATCCTTCGAAGGAAGCCTGTGGAG---------------------------------------- 330
||||||||||||||||||||||||||||||||||
Sbjct 297 GAACTTCTTTATCCTTCGAAGGAAGCCTGTGGAGCAGAAGAAGATCTTTACAATCCAAGGCTGCTACCCGGTGA 370
Query 331 ---------------------------GGGT----------AT------------------------------- 336
|||| ||
Sbjct 371 TCCGGTGTCTCTTGCGCCGGAGGGGCTGGGTGGAGAAGAAGATGGTCCATCGCTCAGGCCCCACCCTGCTGCCA 444
Query 337 ---------------GATA--TCAGCTTTCTGAT------------CACCA----------------------- 358
|||| ||||| ||| |||||
Sbjct 445 CCCCAGAAGGATCTGGATAGCTCAGC-----GATGGGTGACAGTGACACCACTGAGGATGAGGATGAAGATGAG 513
Query 359 -------ACTTCCA-----CACAG-----------AGCAGATGTAC---------------------AAACACA 388
|.||||| ||||| .|..|||.||| .||||||
Sbjct 514 GACGAGGAGTTCCAGCCATCACAGCTGTTCGACTTCGATGATTTACTGAAATTTGATGACCTAGATGGAACACA 587
Query 389 -----AGTTGGT--------------------GGACTTTG--------TGAT---------------------- 407
.|.|||| |||.|||| ||||
Sbjct 588 TGCTCTGATGGTGGGTCTATGTCTCAATCTCCGGAATTTGCCGTGGTTTGATGAGGTTGATGCCAACTCCTTCT 661
Query 408 ----------CCACTTCATGGAG---GAGATTGACA-------------AGGAG---------------ATCAG 440
|.|||.|.|||.| |||..||||| ||||| |.|||
Sbjct 662 TCCCACGCTGCTACTGCCTGGGGGCTGAGGATGACAAAAAAGCCTTCATAGGAGACAAGCAGCCCAAGAAACAG 735
Query 441 TGAGATGAAGCTGTCAGTCAATGCCCGTGCCCGCA----TTGTGGCTGAA------------------GAGTTC 492
||||..||.| ||.||...|||.||.|| ||||||.|||| ||||.|
Sbjct 736 -GAGAAAAACC-------CAGTGTTGGTGTCCCCAGAGTTTGTGGATGAAGCTCTGTGTGCGTGCGAGGAGTAC 801
Query 493 CTTAAGAATTTT-------------------------------------------------------------- 504
||||..||.||.
Sbjct 802 CTTAGCAACTTGGCCCACATGGACATCGACAAGGACCTGGAGGCCCCGCTGTACCTCACCCCCGAGGGCTGGTC 875
Query 505 -------------------------------------------------------------------------- 504
Sbjct 876 CCTCTTCCTCCAGCGCTACTACCAAGTGGTCCACGAAGGGGCAGAACTCAGGCACCTCGACACTCAGGTCCAGC 949
Query 505 -------------------------------------------------------------------------- 504
Sbjct 950 GCTGTGAGGACATCCTGCAGCAGCTGCAGGCCGTGGTACCCCAGATAGACATGGAAGGGGATCGCAACATCTGG 1023
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1024 ATCGTGAAGCCAGGAGCCAAGTCCCGCGGACGAGGCATCATGTGCATGGACCACCTGGAGGAGATGCTGAAGCT 1097
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1098 GGTGAACGGCAACCCCGTGGTGATGAAGGACGGCAAGTGGGTGGTGCAGAAGTATATTGAGCGGCCCCTCCTCA 1171
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1172 TCTTTGGCACCAAGTTTGACCTCAGACAGTGGTTCCTGGTAACTGACTGGAACCCACTTACCGTGTGGTTCTAC 1245
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1246 CGCGACAGCTATATCCGCTTTTCCACGCAGCCCTTCTCCCTGAAGAACCTGGACAACTCAGTGCACCTGTGCAA 1319
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1320 CAACTCCATCCAGAAGCACCTGGAGAACTCATGCCATCGGCATCCACTGCTTCCGCCAGACAACATGTGGTCTA 1393
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1394 GCCAGAGGTTCCAGGCCCACCTGCAGGAGATGGGTGCCCCAAATGCTTGGTCCACCATCATCGTGCCTGGCATG 1467
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1468 AAGGATGCTGTGATCCACGCACTTCAGACCTCCCAGGACACCGTGCAGTGTCGGAAGGCCAGCTTTGAGCTCTA 1541
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1542 TGGCGCTGACTTCGTGTTCGGGGAGGACTTCCAGCCCTGGCTGATTGAGATCAACGCCAGCCCCACGATGGCAC 1615
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1616 CCTCCACAGCAGTCACTGCCCGGCTCTGTGCTGGCGTGCAAGCTGACACCCTGCGCGTGGTCATTGACCGGATG 1689
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1690 CTGGACCGCAACTGTGACACAGGAGCCTTTGAGCTCATCTATAAGCAGCCCGTCACCACTTCCCCAGCCTCCAC 1763
Query 505 -------------------------------------------------------------------------- 504
Sbjct 1764 ACCAAGGCCCAGCTGCCTTCTCCCCATGTACTCCGACACCAGGGCCAGGTCCTCAGACGACAGCACAGCAAGCT 1837
Query 505 -------------------------------------- 504
Sbjct 1838 GGTGGGCACTAAGGCCCTGTCGACCACAGGCAAGGCCT 1875
