Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_02478
• Subject: NM_005584.5
• Aligned Length: 1080
• Identities: 860
• Gaps: 6

Alignment

Query    1  ATGATCGCCGCTCAGGCCAAGCTGGTTTACCAGCTCAATAAGTACTACACTGAGCGCTGTCAGGCGCGCAAGGC  74
            |||||.||.||.||||||||||||||.|||||.||.|||||.|||||||..||....||.||.||..|.||.||
Sbjct    1  ATGATTGCGGCCCAGGCCAAGCTGGTCTACCATCTGAATAAATACTACAACGAAAAATGCCAAGCCAGGAAAGC  74

Query   75  GGCCATCGCCAAAACCATCCGAGAGGTCTGTAAGGTGGTCTCGGACGTGCTCAAGGAAGTGGAGGTGCAGGAGC  148
            .|||||.||||||||.|||||.||.|||||.||.||.||.||.|||||.||.|||||||||||.||||||||||
Sbjct   75  TGCCATTGCCAAAACTATCCGGGAAGTCTGCAAAGTAGTTTCCGACGTACTGAAGGAAGTGGAAGTGCAGGAGC  148

Query  149  CTCGCTTCATCAGCTCCTTGAGCGAGATCGATGCCCGCTACGAGGGGCTCGAGGTCATTTCGCCCACCGAATTT  222
            |.||.|||||||||||..|.|.||||||.||....|||||||||||.|||||||||||.||.||||||||||||
Sbjct  149  CGCGGTTCATCAGCTCTCTCAACGAGATGGACAATCGCTACGAGGGCCTCGAGGTCATCTCCCCCACCGAATTT  222

Query  223  GAGGTGGTGCTCTACCTAAACCAGATGGGCGTCTTCAACTTCGTGGACGACGGCTCGCTGCCCGGCTGCGCAGT  296
            ||.||||||||.||.||.|||||.|||||.||.|||||||||||||||||.|||||.||||||||||||||.||
Sbjct  223  GAAGTGGTGCTTTATCTCAACCAAATGGGGGTGTTCAACTTCGTGGACGATGGCTCACTGCCCGGCTGCGCGGT  296

Query  297  GCTCAAACTGAGCGATGGGCGGAAGCGGAGCATGTCTCTCTGGGTCGAGTTCATCACGGCGTCGGGCTATCTCT  370
            |||.||..|||||||.|||||.|||.||||||||||.||||||||.||.|||||.||.||.||.|||||.||||
Sbjct  297  GCTGAAGTTGAGCGACGGGCGCAAGAGGAGCATGTCCCTCTGGGTGGAATTCATTACCGCCTCCGGCTACCTCT  370

Query  371  CAGCGCGTAAGATCCGCTCGCGTTTCCAGACGCTGGTGGCCCAGGCGGTGGACAAGTGCAGCTATCGGGATGTG  444
            |.|||||.||.|||||.||..|.||.||||||||||||||.||.|||||.|||||.||.|||||.|||||||||
Sbjct  371  CGGCGCGCAAAATCCGGTCCAGGTTTCAGACGCTGGTGGCTCAAGCGGTAGACAAATGTAGCTACCGGGATGTG  444

Query  445  GTCAAGATGATCGCGGACACCAGCGAGGTCAAGTTGCGCATCAGGGAGCGCTATGTGGTGCAAATCACTCCGGC  518
            ||.||||||.|.||.|||||||||||.||.||..||.|.|||.|.||..|.||.||||||||.|||||.|||||
Sbjct  445  GTAAAGATGGTGGCAGACACCAGCGAAGTGAAACTGAGAATCCGAGATAGGTACGTGGTGCAGATCACGCCGGC  518

Query  519  GTTCAAGTGCACCGGGATCTGGCCTCGCAGCGCGGCACAGTGGCCTATGCCCCACATCCCTTGGCCCGGCCCCA  592
            .||.||.|||||||||||||||||..|.||.||.||.||.|||||..|.|||||||||||.|||||.||.||||
Sbjct  519  CTTTAAATGCACCGGGATCTGGCCGAGGAGTGCTGCCCACTGGCCACTTCCCCACATCCCCTGGCCGGGACCCA  592

Query  593  ATCGGGTGGCCGAGGTCAAGGCCGAAGGGTTCAA---CTTGCTCTCGAAGGAGTGCTACTCGCTGACCGGCAAG  663
            |.||||||||.|||||||||||.|||||.|||||   ||||   ||.|||||||||.||||..||.||||||||
Sbjct  593  ACCGGGTGGCGGAGGTCAAGGCGGAAGGTTTCAATCTCTTG---TCCAAGGAGTGCCACTCCTTGGCCGGCAAG  663

Query  664  CAGAGCTCGGCAGAGAGCGACGCCTGGGTGCTACAGTTCGGGGAGGCGGAGAACCGCCTGCTGATGGGCGGCTG  737
            |||||||||||.||||||||||||||||||||.|||||||.||||||.||||||.|.||||.||||||.|||||
Sbjct  664  CAGAGCTCGGCGGAGAGCGACGCCTGGGTGCTGCAGTTCGCGGAGGCAGAGAACAGACTGCAGATGGGGGGCTG  737

Query  738  CCGAAACAAGTGCCTCTCAGTGCTGAAGACTCTGCGGGACCGCCACCTGGAGCTACCCGGCCAGCCGCTCAACA  811
            |.||||.|||||||||||..|.||.||.||..|..||||.||.|||||.||.||.||.||||||||..|.||||
Sbjct  738  CAGAAAGAAGTGCCTCTCCATCCTCAAAACCTTAAGGGATCGTCACCTTGAACTGCCGGGCCAGCCCTTGAACA  811

Query  812  ACTACCACATGAAGACGCTGCTGCTGTACGAGTGCGAGAAACACCCACGAGAAACGGACTGGGACGAGTCGTGC  885
            |.|||||.||||||||.|||.|....||||||||.||.||.||.||.|||||..||||||||||||||||.|||
Sbjct  812  ATTACCATATGAAGACTCTGGTTTCCTACGAGTGTGAAAAGCATCCCCGAGAGTCGGACTGGGACGAGTCTTGC  885

Query  886  CTGGGCGACCGGCTCAACGGCATCCTGCTGCAGCTCATCTCCTGCCTGCAGTGCCGCCGCTGCCCTCACTACTT  959
            |||||.||.|||||.|||||.||..|||||||.||.||||||||||||||||||||.||.||.||.||||||||
Sbjct  886  CTGGGTGATCGGCTGAACGGGATTTTGCTGCAACTTATCTCCTGCCTGCAGTGCCGGCGGTGTCCCCACTACTT  959

Query  960  TCTGCCCAACCTCGACCTCTTTCAGGGCAAGCCCCATTCGGCCCTGGAGAGCGCTGCCAAGCAGACCTGGAGGT  1033
            |||.||.|||.|.||.||.|||||.|||||.||.||.||.||.|||||.|.|||||||||.||.||.|||.|..
Sbjct  960  TCTACCGAACTTAGATCTGTTTCAAGGCAAACCTCACTCAGCTCTGGAAAACGCTGCCAAACAAACGTGGCGAC  1033

Query 1034  TGGCCAGGGAAATTCTCACCAATCCCAAAAGCCTGGACAAACTA  1077
            ||||.||.||.||.||.|||||.||.|||||..||||.|||||.
Sbjct 1034  TGGCAAGAGAGATCCTGACCAACCCGAAAAGTTTGGAAAAACTT  1077