Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_02485
Subject:
NR_148668.2
Aligned Length:
2346
Identities:
1272
Gaps:
1074

Alignment

Query    1  ------------------------------------------------ATGTCTGACCATGGAGATGTGAGCCT  26
                                                            ||||||||||||||||||||||||||
Sbjct    1  GTTTCCGGAACCTCCGGGTGTCATCCGCGGGGAAAGAACTTGGTCCTGATGTCTGACCATGGAGATGTGAGCCT  74

Query   27  CCCGCCCGAAGACCGGGTGAGGGCTCTCTCCCAGCTGGGTAGTGCGGTAGAGGTGAATGAAGACATTCCACCCC  100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCCGCCCGAAGACCGGGTGAGGGCTCTCTCCCAGCTGGGTAGTGCGGTAGAGGTGAATGAAGACATTCCACCCC  148

Query  101  GTCGGTACTTCCGCTCTGGAGTTGAGATTATCCGAATGGCATCCATTTACTCTGAGGAAGGCAACATTGAACAT  174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GTCGGTACTTCCGCTCTGGAGTTGAGATTATCCGAATGGCATCCATTTACTCTGAGGAAGGCAACATTGAACAT  222

Query  175  GCCTTCATCCTCTATAACAAGTATATCACGCTCTTTATTGAGAAACTACCAAAACATCGAGATTACAAATCTGC  248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GCCTTCATCCTCTATAACAAGTATATCACGCTCTTTATTGAGAAACTACCAAAACATCGAGATTACAAATCTGC  296

Query  249  TGTCATTCCTGAAAAGAAAGACACAGTAAAGAAATTAAAGGAGATTGCATTTCCCAAAGCAGAAGAGCTGAAGG  322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGTCATTCCTGAAAAGAAAGACACAGTAAAGAAATTAAAGGAGATTGCATTTCCCAAAGCAGAAGAGCTGAAGG  370

Query  323  CAGAGCTGTTAAAACGATATACCAAAGAATATACAGAATATAATGAAGAAAAGAAGAAGGAAGCAGAGGAATTG  396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CAGAGCTGTTAAAACGATATACCAAAGAATATACAGAATATAATGAAGAAAAGAAGAAGGAAGCAGAGGAATTG  444

Query  397  GCCCGGAACATGGCCATCCAGCAAGAGCTGGAAAAGGAAAAACAGAGGGTAGCACAACAGAAGCAGCAGCAATT  470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GCCCGGAACATGGCCATCCAGCAAGAGCTGGAAAAGGAAAAACAGAGGGTAGCACAACAGAAGCAGCAGCAATT  518

Query  471  GGAACAGGAACAGTTCCATGCCTTCGAGGAGATGATCCGGAACCAGGAGCTAGAAAAAGAGCGACTGAAAATTG  544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGAACAGGAACAGTTCCATGCCTTCGAGGAGATGATCCGGAACCAGGAGCTAGAAAAAGAGCGACTGAAAATTG  592

Query  545  TACAGGAGTTTGGGAAGGTAGACCCTGGCCTAGGTGGCCCGCTAGTGCCTGACTTGGAGAAGCCCTCCTTAGAT  618
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TACAGGAGTTTGGGAAGGTAGACCCTGGCCTAGGTGGCCCGCTAGTGCCTGACTTGGAGAAGCCCTCCTTAGAT  666

Query  619  GTGTTCCCCACCTTAACAGTCTCATCCATACAGCCTTCAGACTGTCACACAACTGTAAGGCCAGCTAAGCCACC  692
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GTGTTCCCCACCTTAACAGTCTCATCCATACAGCCTTCAGACTGTCACACAACTGTAAGGCCAGCTAAGCCACC  740

Query  693  TGTGGTGGACAGGTCCTTGAAACCTGGAGCACTGAGCAACTCAGAAAGTATTCCCACAATCGATGGATTGCGCC  766
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGTGGTGGACAGGTCCTTGAAACCTGGAGCACTGAGCAACTCAGAAAGTATTCCCACAATCGATGGATTGCGCC  814

Query  767  ATGTGGTGGTGCCTGGGCGGCTGTGCCCACAGTTTCTCCAGTTAGCCAGTGCCAACACTGCCCGGGGAGTGGAG  840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATGTGGTGGTGCCTGGGCGGCTGTGCCCACAGTTTCTCCAGTTAGCCAGTGCCAACACTGCCCGGGGAGTGGAG  888

Query  841  ACATGTGGAATTCTCTGTGGAAAACTGATGAGGAATGAATTTACCATTACCCATGTTCTCATCCCCAAGCAAAG  914
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ACATGTGGAATTCTCTGTGGAAAACTGATGAGGAATGAATTTACCATTACCCATGTTCTCATCCCCAAGCAAAG  962

Query  915  TGCTGGGTCTGATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCATACAGGATCAGCAGGGCCTCATCA  988
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGCTGGGTCTGATTACTGCAACACAGAGAACGAAGAAGAACTTTTCCTCATACAGGATCAGCAGGGCCTCATCA  1036

Query  989  CACTGGGCTGGATTCATACTCACCCCACACAGACCGCGTTTCTCTCCAGTGTCGACCTACACACTCACTGCTCT  1062
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CACTGGGCTGGATTCATACTCACCCCACACAGACCGCGTTTCTCTCCAGTGTCGACCTACACACTCACTGCTCT  1110

Query 1063  TACCAGATGATGTTGCCAGAGTCAGTAGCCATTGTTTGCTCCCCCAAGTTCCAGGAAACTGGATTCTTTAAACT  1136
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TACCAGATGATGTTGCCAGAGTCAGTAGCCATTGTTTGCTCCCCCAAGTTCCAGGAAACTGGATTCTTTAAACT  1184

Query 1137  AACTGACCATGGACTAGAGGAGATTTCTTCCTGTCGCCAGAAAGGATTTCATCCACACAGCAAGGATCCACCTC  1210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AACTGACCATGGACTAGAGGAGATTTCTTCCTGTCGCCAGAAAGGATTTCATCCACACAGCAAGGATCCACCTC  1258

Query 1211  TGTTCTGTAGCTGCAGCCACGTGACTGTTGTGGACAGAGCAGTGACCATCACAGACCTTCGA------------  1272
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
Sbjct 1259  TGTTCTGTAGCTGCAGCCACGTGACTGTTGTGGACAGAGCAGTGACCATCACAGACCTTCGATGAGCGTTTGAG  1332

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1333  TCCAACACCTTCCAAGAACAACAAAACCATATCAGTAAACCGAAACTTCATTGCCCCTTCAATGTGGGAATCCA  1406

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1407  GCCAGACCCTATTCTTGGACAGCATCAGTGAAAGGGGCTTGGGAAAGCTCTTGGGCGTAGCAGCAGAGGCATGT  1480

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1481  CATATATGGAAACCTTCCATGAGGGTGACCTCACCACTGGAACCCGTTCAACATAAACCTTGCTGCAAGAACTA  1554

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1555  GCAGAGCTCTTTGGACAAAACGTGTATAGACGGGGTTTCACCATGTTGGCCAAGCTGGTCTCAAACTCCTGACC  1628

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1629  TCAAGGGATCCACCCGCCTAGACCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCTCATCTGGCCAAGAAA  1702

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1703  AAGAACTTTTTAGTTCAACAGTTTCAACACAATATTTGGAATTGAGATATTGGGTCATGGCTTTGGTCATGACT  1776

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1777  TCATCCTTGAACCAATCACTCTGACCAGGAGGATGGAATATTAGCCAGGCCTGGATCATGTACCCATAACCCAT  1850

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1851  CTACGCCACATGCACTGAGAGTGGGGCAGCATTCATTTCCAAAGAAGAATGGTGGTGGCAGAAGGGGAAGTAGA  1924

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1925  TGCTGGGCAGGCAAAGGCAACAGATGTCCACCATGCATGCCTAGAAGAAAAAAGTGCTGTTAGCTTTAGATAAT  1998

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 1999  AGCAGCTGGACGATGGGGTAGTGACCTTCTCACTCCCAAAAAGCTCACCAAGATGGAGGAACAGAGCCCATGGC  2072

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2073  CCACTTACTACATGGATTCCCACTTTACAGTGGAGAAGGAGCTTGCAGTAACCACAAAAGTTTCTGTATAAGCA  2146

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2147  AATTTAGGGAATTGAACTTCAGACAGTGTGGTTGTCTCCTTACTTATGAACTTGGGAATACTTACTTAGGTAAC  2220

Query 1273  --------------------------------------------------------------------------  1272
                                                                                      
Sbjct 2221  AACTAACATCAGAGGTTTTTGATCTGTAGCCTTTCTTTCTGTCCATAATTAGCTAATAGCTTCTGCTGTACAAA  2294

Query 1273  ----------------------------------------------------  1272
                                                                
Sbjct 2295  CACAAACCATTCCCTGTCCAAGAAAATTAAACTATATCATCAGAATAAGAAA  2346

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