Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02571
- Subject:
- XR_374511.3
- Aligned Length:
- 1938
- Identities:
- 679
- Gaps:
- 1160
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAGCCCCGCCTCGTCTGGCCCCGCCCCTCAGGGCCGGTCCACAGTGGGCCTTAAAGGCACGCAGCCCTAGCTTC 74
Query 1 --------------------------------------------------------------------ATGGCC 6
||||||
Sbjct 75 CGGGTGGAAGCTGTTGCGCACCACTTAGCTGGGAAGTGCGTTGCTCCCTGTTTCCCAGCCCACCCGAGATGGCC 148
Query 7 CCCAAATTCCCAGACTCTGTGGAGGAGCTCCGCGCCGCCGGCAATGAGAGTTTCCGCAACGGCCAGTACGCCGA 80
||||||.||.|.||.||.|||||..||||||||||.||||||||..|||..||||||||.||||||||||.|||
Sbjct 149 CCCAAAGTCTCGGATTCCGTGGAACAGCTCCGCGCTGCCGGCAACCAGAACTTCCGCAATGGCCAGTACGGCGA 222
Query 81 GGCCTCCGCGCTCTACGGCCGCGCGCTGCGGGTGCTGCAGGCGCAAGGTTCTTCAGACCCAGAAGAAGAAAGTG 154
.|||||.|||||.||||..|||||.||||||.||||||||||||.|||||||.|||||||.|||||||||||||
Sbjct 223 AGCCTCGGCGCTGTACGAGCGCGCACTGCGGCTGCTGCAGGCGCGAGGTTCTGCAGACCCCGAAGAAGAAAGTG 296
Query 155 TTCTCTACTCCAACCGAGCAGCATGTCACTTGAAGGATGGAAACTGCAGAGACTGCATCAAAGATTGCACTTCA 228
||||.|||||||||||.|||||.||..|||||||||||||.|||||||.|||.||||||||||||||||||||.
Sbjct 297 TTCTGTACTCCAACCGTGCAGCGTGCTACTTGAAGGATGGGAACTGCACAGATTGCATCAAAGATTGCACTTCC 370
Query 229 GCACTGGCCTTGGTTCCCTTCAGCATTAAGCCCCTGCTGCGGCGAGCATCTGCTTATGAGGCTCTGGAGAAGTA 302
||.|||||||||||||||||||||||.||||||.|||||||..||||||||||.|||||.||.|||||||||||
Sbjct 371 GCGCTGGCCTTGGTTCCCTTCAGCATCAAGCCCTTGCTGCGCAGAGCATCTGCATATGAAGCCCTGGAGAAGTA 444
Query 303 CCCTATGGCCTATGTTGACTATAAGACTGTGCTGCAGATTGATGATAATGTGACGTCAGCCGTAGAAGGCATCA 376
|.|..|||||||.||||||||||||||||||||||||||.|||.|.|.||||.|.||.|||.|.||||||||||
Sbjct 445 CGCCCTGGCCTACGTTGACTATAAGACTGTGCTGCAGATCGATAACAGTGTGGCATCCGCCCTGGAAGGCATCA 518
Query 377 ACAGAATGACCAGAGCTCTCATGGACTCGCTTGGGCCTGAGTGGCGCCTGAAGCTGCCCTCAATCCCCTTGGTG 450
|||||||.||||||||||||||||||||.||.||.||||||||||||||||||||||||.|.|||||..|||||
Sbjct 519 ACAGAATAACCAGAGCTCTCATGGACTCCCTGGGACCTGAGTGGCGCCTGAAGCTGCCCCCTATCCCTGTGGTG 592
Query 451 CCTGTTTCAGCTCAGAAGAGGTGGAATTCCTTGCCTTCGGAGAACCACAAAGAGATGGCTAAAAGCAAATCCAA 524
|||||||||||.||||||||.|||||||||||||||||.||.|||||||||||||..|||||||.|||||||||
Sbjct 593 CCTGTTTCAGCCCAGAAGAGATGGAATTCCTTGCCTTCAGATAACCACAAAGAGACAGCTAAAACCAAATCCAA 666
Query 525 AGAAACCACAGCTACAAAGAACAGAGTGCCTTCTGCTGGGGATGTGGAGAAAGCCAGAGTTCTGAAGGAAGAAG 598
||||.||||||||||.||||.|||||
Sbjct 667 AGAAGCCACAGCTACGAAGAGCAGAG------------------------------------------------ 692
Query 599 GCAATGAGCTTGTAAAGAAGGGAAACCATAAGAAAGCTATTGAGAAGTACAGTGAAAGC-CTCTTGTGTAGTAA 671
||| |||| ||.|
Sbjct 693 --------------------------------------------------------AGCGCTCT------GTCA 704
Query 672 CCTGGAATCTGCCACGTACAGCAACAGAGCACTCTGCTATTTGGTCCTGAAGCAGTACACAGAAGCAGTGAAGG 745
|| ||||||||||||||||||..||.|||||.||||
Sbjct 705 CC---------------------------------------TGGTCCTGAAGCAGTACAAGGAGGCAGTAAAGG 739
Query 746 ACTGCACAGAAGCCCTCAAGCTGGATGGAAAGAACGTGAAGGCATTCTACAGACGGGCTCAAGCCCACAAAGCA 819
||||||||||||||||||||||||||||.|||||.||.|||||.||.||||||||||||||||||.||||.|||
Sbjct 740 ACTGCACAGAAGCCCTCAAGCTGGATGGGAAGAATGTAAAGGCGTTTTACAGACGGGCTCAAGCCTACAAGGCA 813
Query 820 CTCAAGGACTATAAATCCAGCTTTGCAGACATCAGCAACCTCCTACAGATTGAGCCTAGGAATGGTCCTGCACA 893
||||||||||||||.||.|||.||.|.||.|||||||.|||||||||.|||||.||.||||||||.||||||||
Sbjct 814 CTCAAGGACTATAAGTCAAGCCTTTCGGATATCAGCAGCCTCCTACAAATTGAACCCAGGAATGGCCCTGCACA 887
Query 894 GAAGTTGCGGCAGGAAGTGAAGCAGAAC-----CTACAC----------------------------------- 927
||||||.|||||||||||.||.|||||| |||.||
Sbjct 888 GAAGTTACGGCAGGAAGTTAACCAGAACATGAACTAAACCGTAGAGGGCAACAGGGACCCTGAACTTGACCTTC 961
Query 928 -------------------------------------------------------------------------- 927
Sbjct 962 CCAGAGAAGCCAGGGCCTCCCTTGCATCTGCCCCAATGCCCAGCATGCCGCCAAGGGAGTGCAAAATCAACCCC 1035
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1036 ACTTTGACTCCTTGGAGAGGTAGCAGCCTTTCACCTGACACATTTTACTTGTTCAGATTAAGTCCATTACAGAC 1109
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1110 AAGCACAGGACTCTTTTTTTTTTTCTTCTTTTTTTTTTCCAGAAAGGTCCCCACTAGAGGTTTTTGTTTTGTTT 1183
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1184 TATTTTTAATTTAAAAAAGCGTGACGCCAACAGCCCTGGCCTCATTCGCTTGCTTCTGCCTGGCCCTTGTCAAC 1257
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1258 ACAGTCCTTGGCAACTGTCCCTGACCCAGATATGCACAGACTGGGTGCCTGTGACTTCCTCTGCCGCCATAGCT 1331
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1332 CTGCAGTTCACCTGAGTGCTGACAGGCTAGAAGTGCTTGCTCGTCCGCAGCCACAGCGGCCTGTTGAGCTGGTT 1405
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1406 CTCCAAGGCTGCCTGCCATCTCCTCGAGGAGACAGCTGCTGTCTGCACCCTGTCCTTGACACAGTGTCCTGTGT 1479
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1480 TGAGCCCCAGTGCCTTTAGTCCAGGCCCTTTGTGGGAAGGCAGAGCCTAACCCTTGGAGGCTCTGTGTTGTTGC 1553
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1554 CTTCTGTCTGAGCTACCTACGATGTTCAAAGAGCCCAGATTCCTCCTGCAATGGGGAGAGAGGCCTCCTTGAGA 1627
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1628 TTAGTGTCCCTCCAGTCTGAGCAGGAACTTAACCTTTTCCCCCATAGCAGCAGCCCCTCGGGCTCCTTTGTTTT 1701
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1702 GTTTTGTTTTGTTAATATGTTGGAGTTAATTGAACTGATTTTATTGAAGTGTGTGTTGCTGTTGCATTAAAAGG 1775
Query 928 -------------- 927
Sbjct 1776 TTTTCTTCTATACA 1789
