Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_02581
- Subject:
- NM_001284271.1
- Aligned Length:
- 2203
- Identities:
- 307
- Gaps:
- 1880
Alignment
Query 1 ATGGCTTTACCTCGTCTCACAGGAGCCTTGCGTTCCTTTTCAAATGTCACCAAGCAAGATAATTATAATGAAGA 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCTTTACCTCGTCTCACAGGAGCCTTGCGTTCCTTTTCAAATGTCACCAAGCAAGATAATTATAATGAAGA 74
Query 75 AGTGGCTGACTTAAAGATAAAGCGATCTAAACTTCATGAACAAGTTTTAGATTTGGGCCTGACATGGAAGAAGA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGTGGCTGACTTAAAGATAAAGCGATCTAAACTTCATGAACAAGTTTTAGATTTGGGCCTGACATGGAAGAAGA 148
Query 149 TAATAAAATTTTTGAATGAAAAACTGGAGAAGAGTAAAATGCAAAGTATAAATGAAGACTTAAAAGATATATTA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TAATAAAATTTTTGAATGAAAAACTGGAGAAGAGTAAAATGCAAAGTATAAATGAAGACTTAAAAGATATATTA 222
Query 223 CATGCTGCAAAGCAGATAG-------------------------------AAGTG-------AATTGTC----- 253
||||||||||||||||||| ||||| |.||.||
Sbjct 223 CATGCTGCAAAGCAGATAGTTGGAACTGATAATGGGAGAGAAGCAATTGAAAGTGGGGCTGCATTTCTCTTCAT 296
Query 254 --CATTCCA---GAAGAGGAGGCTG-------GATGGAAAAGAGGAGG--ATGAGA-AGATG------------ 300
||||.|| || ||||..||| .|.|||||..| ||| ||.|.| |||||
Sbjct 297 GACATTTCACTTGA--AGGACTCTGTTGGTCACAAGGAAACAA--AGGCTATCAAACAGATGTTTGGCCCCTTT 366
Query 301 -----AGCAGAGCTTCTGACAGATTCAG------AGG--ACTAA--GA-------------------------- 333
|.|| ||||.|| .|.||| |.| ||||| ||
Sbjct 367 CCTTCATCA-----TCTGCCA-CTGCAGCTTGTAATGCTACTAATCGAATTATTTCTCATTTTAGTCAAGATGA 434
Query 334 -------------------------------------------------------------------------- 333
Sbjct 435 TCTTACTGCTCTTGTGCAGATGACAGAAAAAGAACATGGCGATAGGGTTTTTTTTGGTAAAAATTTAGCATTTT 508
Query 334 -------------------------------------------------------------------------- 333
Sbjct 509 CATTTGACATGCATGATTTGGACCACTTTGACGAACTGCCAATAAATGGTGAAACTCAGAAAACTATAAGCCTA 582
Query 334 -------------------------------------------------------------------------- 333
Sbjct 583 GATTATAAGAAGTTTCTGAATGAACATCTCCAGGAGGCTTGCACCCCAGAACTCAAGCCTGTGGAAAAAACAAA 656
Query 334 -------------------------------------------------------------------------- 333
Sbjct 657 TGGCTCCTTTTTGTGGTGTGAAGTTGAAAAGTACCTAAATTCAACTTTGAAGGAAATGACTGAAGTGCCAAGAG 730
Query 334 -------------------------------------------------------------------------- 333
Sbjct 731 TAGAAGATCTTTGCTGTACTTTATATGATATGCTTGCTTCTATTAAAAGTGGTGATGAACTTCAGGATGAGCTA 804
Query 334 -------------------------------------------------------------------------- 333
Sbjct 805 TTTGAACTGCTGGGACCTGAAGGACTTGAACTTATTGAGAAACTCCTCCAGAACAGAATTACAATTGTGGATAG 878
Query 334 -------------------------------------------------------------------------- 333
Sbjct 879 ATTTCTTAATTCTTCAAATGATCATAGGTTTCAGGCTCTTCAAGACAATTGTAAAAAAATTTTAGGAGAAAATG 952
Query 334 -------------------------------------------------------------------------- 333
Sbjct 953 CTAAACCCAATTATGGTTGTCAAGTCACTATTCAGTCTGAACAAGAAAAGCAGTTAATGAAACAATATCGACGT 1026
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1027 GAAGAAAAAAGAATTGCCAGACGAGAAAAAAAGGCTGGAGAAGATTTAGAAGTTTCAGAAGGACTTATGTGCTT 1100
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1101 TGATCCTAAGGAATTGCGGATACAAAGAGAACAGGCACTTCTGAATGCTAGAAGTGTTCCAATTCTGAGCAGGC 1174
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1175 AGAGAGATGCAGACGTTGAAAAAATACATTATCCCCATGTGTATGATTCCCAGGCTGAAGCCATGAAAACATCA 1248
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1249 GCATTTATTGCTGGTGCAAAGATGATTTTGCCAGAAGGAATCCAAAGAGAGAATAACAAGCTTTATGAAGAAGT 1322
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1323 AAGGATTCCCTACAGCGAACCAATGCCACTCAGCTTTGAGGAAAAGCCAGTTTATATCCAAGACTTAGATGAGA 1396
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1397 TCGGACAGCTGGCTTTTAAAGGAATGAAGAGACTCAATAGAATCCAGTCAATAGTGTTTGAGACTGCCTACAAC 1470
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1471 ACCAATGAGAACATGCTGATTTGTGCCCCTACAGGAGCTGGAAAAACCAACATTGCAATGCTGACAGTCTTGCA 1544
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1545 TGAAATTCGCCAACATTTTCAACAAGGTGTTATCAAAAAGAATGAATTTAAGATTGTATATGTTGCTCCAATGA 1618
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1619 AAGCCTTGGCAGCTGAAATGACAGATTACTTCAGCAGACGTCTAGAGCCACTAGGCATCATTGTGAAAGAATTG 1692
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1693 ACTGGTGACATGCAGTTGTCCAAAAGTGAAATTTTACGAACTCAGATGCTTGTGACCACACCAGAAAAATGGGA 1766
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1767 TGTAGTGACAAGAAAGAGTGTTGGGGATGTAGCTCTTTCCCAGATTGTAAGGCTCCTTATTCTTGATGAAGTTC 1840
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1841 ATTTGCTGCATGAAGATAGAGGACCAGTATTAGAAAGCATAGTTGCCCGTACTTTACGGCAGGTGGAATCCACA 1914
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1915 CAGAGTATGATAAGGATTCTCGGACTGTCTGCAACTTTACCTAACTACCTCGATGTTGCCACATTTTTACATGT 1988
Query 334 -------------------------------------------------------------------------- 333
Sbjct 1989 TAATCCATACATTGGACTTTTCTTCTTTGATGGCCGTTTTCGACCAGTACCTCTTGGACAGACATTTTTGGGGA 2062
Query 334 -------------------------------------------------------------------------- 333
Sbjct 2063 TTAAATGTGCAAATAAGATGCAGCAGTTGAATAACATGGATGAAGTATGTTATGAAAATGTTTTGAAGCAAGTA 2136
Query 334 --------------------------------------------------------- 333
Sbjct 2137 AAGGCTGGACACCAGGTACACTTATTTTATCTGCTTTTACACTTATTTATCTGCTTT 2193
